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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_07s0005g00210.t01
CDS Infomation

cds chromosome:12X:7:2993104:2996240:1 gene:VIT_07s0005g00210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiamine pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:D7U270]
Sequence

ATGGACTTAATGCGTCACTCCTCCGCCTTCCTCCTCCCTTCGATTCCCGACGACGGTCCC
CCTCCTACTTACGCCCTCGTCGTCCTCAACCAACGCCTTCCTCGCTTTACTCCTCTCGTA
TGGAAGCACGCACAACTGCGGCTCTGTGCGGATGGAGGAGCGAATCGTCTGTATGATGAA
ATGCCTGGGCTCTTGGCTGATGAAGATGGAAACGATGTCAGAAACAGGTACAAGCCCGAT
GCAGTAAAAGGAGACATGGATTCAGTCAGAACTGAAGTATTGGAATTTTATTCAAACTTG
GATCCCGCTTTGAGGGAGGGAACCAAGATTGTGGATGAATCTCATGATCAGGACACCACA
GATCTGCATAAGTGTATAGCATTTATTCGGGACTTCACACCAGACCTGGACAAGTCCAAT
CTATGCATACTTGTTGCTGGAGCACTTGGAGGAAGGTTTGACCACGAGGTTGGAAACATA
AATGTTCTTTACCGTTTCTCAACCATGCGAATAATCCTTTTGTCTGATGATTGCCTCATC
CACCTTCTTCCAAGGACTCACCATCACGAGATCCATATCCAGTCTTCTGTAGAGGGCCCA
CATTGTGGGCTTGTCCCCATTGGCACACCTTCTGGCAGCACTACAACCACAGGGCTCCAA
TGGGATCTCAATGACACGGAGATGAAATTTGGTGGATTGGTAAGTACATCAAACATTGTG
AAAGGAGACAAGATAACAGTGCAATCAGATTCAGATCTTCTTTGGACGATATCGATTAAA
AAGGTGTGA

Peptide Sequence

PEP ID

VIT_07s0005g00210.t01
PEP Infomation

pep chromosome:12X:7:2993104:2996240:1 gene:VIT_07s0005g00210 transcript:VIT_07s0005g00210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiamine pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:D7U270]
Sequence

MDLMRHSSAFLLPSIPDDGPPPTYALVVLNQRLPRFTPLVWKHAQLRLCADGGANRLYDE
MPGLLADEDGNDVRNRYKPDAVKGDMDSVRTEVLEFYSNLDPALREGTKIVDESHDQDTT
DLHKCIAFIRDFTPDLDKSNLCILVAGALGGRFDHEVGNINVLYRFSTMRIILLSDDCLI
HLLPRTHHHEIHIQSSVEGPHCGLVPIGTPSGSTTTTGLQWDLNDTEMKFGGLVSTSNIV
KGDKITVQSDSDLLWTISIKKV

Transcript Sequence

Transcript ID

VIT_07s0005g00210.t01
Transcript Infomation

cdna chromosome:12X:7:2993104:2996240:1 gene:VIT_07s0005g00210 gene_biotype:protein_coding transcript_biotype:protein_coding description:Thiamine pyrophosphokinase [Source:UniProtKB/TrEMBL;Acc:D7U270]
Sequence

AAACTTCAAAAAGTCCAAATCACTCGGAGAAAGATATATTCATTTTTCTCTGCATCCTCA
TTTCCTCTCTCTCTCTCTCTCTCTTCCTCGTCCCTACGGCGCACGTTAGCCATGGACTTA
ATGCGTCACTCCTCCGCCTTCCTCCTCCCTTCGATTCCCGACGACGGTCCCCCTCCTACT
TACGCCCTCGTCGTCCTCAACCAACGCCTTCCTCGCTTTACTCCTCTCGTATGGAAGCAC
GCACAACTGCGGCTCTGTGCGGATGGAGGAGCGAATCGTCTGTATGATGAAATGCCTGGG
CTCTTGGCTGATGAAGATGGAAACGATGTCAGAAACAGGTACAAGCCCGATGCAGTAAAA
GGAGACATGGATTCAGTCAGAACTGAAGTATTGGAATTTTATTCAAACTTGGATCCCGCT
TTGAGGGAGGGAACCAAGATTGTGGATGAATCTCATGATCAGGACACCACAGATCTGCAT
AAGTGTATAGCATTTATTCGGGACTTCACACCAGACCTGGACAAGTCCAATCTATGCATA
CTTGTTGCTGGAGCACTTGGAGGAAGGTTTGACCACGAGGTTGGAAACATAAATGTTCTT
TACCGTTTCTCAACCATGCGAATAATCCTTTTGTCTGATGATTGCCTCATCCACCTTCTT
CCAAGGACTCACCATCACGAGATCCATATCCAGTCTTCTGTAGAGGGCCCACATTGTGGG
CTTGTCCCCATTGGCACACCTTCTGGCAGCACTACAACCACAGGGCTCCAATGGGATCTC
AATGACACGGAGATGAAATTTGGTGGATTGGTAAGTACATCAAACATTGTGAAAGGAGAC
AAGATAACAGTGCAATCAGATTCAGATCTTCTTTGGACGATATCGATTAAAAAGGTGTGA
AGTATACTGCTCTTTGGATGCCTTTAATCTGGATCTAGATGACGAAGTCTTCCCTGTCTT
CCCTGTCGGGGTGAAGCTGCATATATAGTTGTTTTCATGCCACTATTGGTCCCATATTTT
TTCTCATAGTTATATTAGATGTTTTTAGCTTCTTCTGTACAATATTTACTTTCCATTTAA
TTGTATGTAGTTAATTCTGTTTCAA