Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00890.t01
CDS Infomation

cds chromosome:12X:6:20951363:20959321:-1 gene:VIT_06s0080g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGACCCTCTCGAGGGTGGGCTGCTTAACCAACTGTACGCACTTCCCATTCCCAACT
TCATCTCCAATTTGTCCTCCTCAGTCCCATTCTACCAGACTTCCATCTCTCTCTGTCCTT
AGAACTCCTCGTCCAGTGGGTGAACTTGCAGGGGAGGATGTTTTGCGAATGTTCTTTAAG
GAGAGAGAATTGAATGGGGATTTTATTTCAAAAGCTTCTGATATGCTTTGGCAGAGGGAG
GTCATGAAATTTGTTGATGCAGAAGCTGGCACACCACCTGACACTCCTCAACAACCAGAG
GGGGTCAAGGAAACTGAATATGAAGGTGGATTTTTGAAACTGACAAGAACGCAGGAATGG
GTATTAGGTGACAACTCTGCACCAATCAACAAGAAAGCCATTGCTAAGGTACTTCAGGAT
GACAGTGAAAGGAGGAAGAGACTGAACCTTCTCAAATATGAAGCTCTTAAGAGGGAAATA
TTGCTGTTATCTGTTGGCATTGGAACTGCATGTAGTGGGTATTGTTTGATAGTTCTGTCA
GCCCAGGCAGCTATTAGTTATGCAGCAGGAGTTCTTTTCAGTTGCTTGTACCTCCAGCTT
TTGTATCAACATGCGGACAATCTATCCAAGGAAGCTGTTCCTCAGATTTTCATGAAAAAG
AAGTCAAAGAAAATTGGAATAAGAAGCCAGGACCTGGAGGATCTGTTAGAGAAAACCATC
AAGGGTAGTGGTATTGCCCTTTCATCTCCAAGGCTAGTGATCCCTGCAGCTATATATGGG
TTGTGGATCTTGTCTCAGCATTTTGCTGGTGATTTCTTTGATTTTCAGCTGGTGCCAGCC
ATGTTTGGGATGTTTGCATATAAAGCTGCTGCTCTGGTTCAAGTTTATAGGGACAATGAA
GATCTACAATTTGTCTTCCCAGACAATGAAGAAGGCTCAATTGACTAA

Peptide Sequence

PEP ID

VIT_06s0080g00890.t01
PEP Infomation

pep chromosome:12X:6:20951363:20959321:-1 gene:VIT_06s0080g00890 transcript:VIT_06s0080g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METLSRVGCLTNCTHFPFPTSSPICPPQSHSTRLPSLSVLRTPRPVGELAGEDVLRMFFK
ERELNGDFISKASDMLWQREVMKFVDAEAGTPPDTPQQPEGVKETEYEGGFLKLTRTQEW
VLGDNSAPINKKAIAKVLQDDSERRKRLNLLKYEALKREILLLSVGIGTACSGYCLIVLS
AQAAISYAAGVLFSCLYLQLLYQHADNLSKEAVPQIFMKKKSKKIGIRSQDLEDLLEKTI
KGSGIALSSPRLVIPAAIYGLWILSQHFAGDFFDFQLVPAMFGMFAYKAAALVQVYRDNE
DLQFVFPDNEEGSID

Transcript Sequence

Transcript ID

VIT_06s0080g00890.t01
Transcript Infomation

cdna chromosome:12X:6:20951363:20959321:-1 gene:VIT_06s0080g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCCTGGGAAAAGCAGAAAATCAATAATCGAGAGATATTTCTGCTTTCCATTGGCCACA
GAGGAAGAAGAGGATAGCGGAGTTGTATTGGAAATGGAGACCCTCTCGAGGGTGGGCTGC
TTAACCAACTGTACGCACTTCCCATTCCCAACTTCATCTCCAATTTGTCCTCCTCAGTCC
CATTCTACCAGACTTCCATCTCTCTCTGTCCTTAGAACTCCTCGTCCAGTGGGTGAACTT
GCAGGGGAGGATGTTTTGCGAATGTTCTTTAAGGAGAGAGAATTGAATGGGGATTTTATT
TCAAAAGCTTCTGATATGCTTTGGCAGAGGGAGGTCATGAAATTTGTTGATGCAGAAGCT
GGCACACCACCTGACACTCCTCAACAACCAGAGGGGGTCAAGGAAACTGAATATGAAGGT
GGATTTTTGAAACTGACAAGAACGCAGGAATGGGTATTAGGTGACAACTCTGCACCAATC
AACAAGAAAGCCATTGCTAAGGTACTTCAGGATGACAGTGAAAGGAGGAAGAGACTGAAC
CTTCTCAAATATGAAGCTCTTAAGAGGGAAATATTGCTGTTATCTGTTGGCATTGGAACT
GCATGTAGTGGGTATTGTTTGATAGTTCTGTCAGCCCAGGCAGCTATTAGTTATGCAGCA
GGAGTTCTTTTCAGTTGCTTGTACCTCCAGCTTTTGTATCAACATGCGGACAATCTATCC
AAGGAAGCTGTTCCTCAGATTTTCATGAAAAAGAAGTCAAAGAAAATTGGAATAAGAAGC
CAGGACCTGGAGGATCTGTTAGAGAAAACCATCAAGGGTAGTGGTATTGCCCTTTCATCT
CCAAGGCTAGTGATCCCTGCAGCTATATATGGGTTGTGGATCTTGTCTCAGCATTTTGCT
GGTGATTTCTTTGATTTTCAGCTGGTGCCAGCCATGTTTGGGATGTTTGCATATAAAGCT
GCTGCTCTGGTTCAAGTTTATAGGGACAATGAAGATCTACAATTTGTCTTCCCAGACAAT
GAAGAAGGCTCAATTGACTAAGAAATCCAGTTTAGATATCTTGGAGGAGTGCATTGATGC
CCATTCTTCTTAGTATTCCAAAGGCAGCTGGGCACTCAGAAGCTTGCTTGAAAGGCTACA
AATTGGGCTACTTTGAGCATCCAAAGTAGTGGGTGGATTCTGAGGAAACAACAGATTTTT
AGTAAAAATTTTGTAAATGTAAATGGTAAAAGATTTATGTTGAGTATATAAAAAACCTTT
CACCTGCTGGTGGAATGATACAGAATTCATGGGTCAGTCACACGGTCAATGCAAGTAGGT
GTATTTCAATTTAATGCATGTGTTCTCTTCTC