Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00850.t01
CDS Infomation

cds chromosome:12X:6:20868712:20879612:1 gene:VIT_06s0080g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTCGGATTTTGGTTCAGCGTGGTTCTGGTTCGAACCCTAATCGCACTTCTTCCTTG
CCCAGTTCTTCTTTGGCTCCATCCCAGCCTCAGGCCGCTACTCAAGTTCCTTCTACTGTC
AAAGATGAGGAAGTCGGAGAGGAGGTGCAGGAACAAACAATCGTGGATGATACCTTGGAG
ACTTGTGAGAATAAGGTGACGAAAACTGATGATCTTTTGCAAGAAAGTGTCCGGAATGAC
AATGCAAATGATGATAATGTTGATGGTGAAAAGATTGTTAATGATGATGTTCTGGGGTCT
GGGGATTTGGATCAAGAGTTTGGTGGGTTGAGGATTAATGAGAAACTTGCAGTTGAAAAT
GAGGGCTCGAGTGCTGATTCTTCACAGATTGTTAACAGGAGTTCCTATCCCCCTCCTCCT
CCTGTCCCTCCCCCAAAACATTGGGCGACTAATTCAAATCCAATGAGATTTGGCTCAGAC
GGTTCAAATTCTGTACGGATTGGATCACCTAGAAGAGCAGTTGCCTGGCCTATTGTTTCA
ACTAGGACTTCTCCAACTGGTTCACGGCCTTCCTCTCCCAGGTCTCATGGTGAAAGTGAA
GGTTACAATAGTGCTGATGAGCAGAATTCCTGCTTTGTATCCTCCTATGATGATGCTGAA
AGAGAACGCCAATTTGAGATTGATATCAGGCGGGCAAAAGGTTTAGAAGTCAAACGGATG
GTGGAGGATGGGAACTGCCTCTTTCGTGCTGTTGCAGATCAGGTCTATGGGGACTCTGAA
GCGTATGATTTGATTAGGCAAATGTGCATTGATTATATGGAGCGGGAGAGAGATCACTTT
TCTCAATTCATAACAGAAGGTTTTATGTCTTACTGTAAGAGGAAGAGAAGAGACAAGGTC
TATGGAAACAATGCAGAGATCCAAGCTTTATCTGAAATGTATAATCGGCCTATCCATATA
TATTCCTATAGCACAGAACCTATCAACATTTTTCATGGAAGCTATGATACTGACACACCT
CCCATTCGATTAAGCTATCATCATGGGAATCATTACAACTCACTTGTTGATCCCCGGCGA
TTAACCATTGGTGCTGGGCTTGGATTTAGCTCTCTACGTGGGGTGAATGTTGACAAGGAT
CAAGTCAAGGCTGCTATTAAAGCTCAACAAGACCAACAAATTGATAATGCACTTCTAGCT
GAGGGGCGGTTTTACTCGGATCTTGAGCTCACGGAGAAGGAGATTGAACGTATGGTGATG
GAAGCCTCTCGAGCTGAGTATCTTGCTGATGACAAATTCAAGTCACAACTTGGCTGTAGA
GAGTCTTCTTCTACGTCTGGTGCTGAACCATCGTCTTCTGGAGCAAGGCCATCAGGGAGT
GAGACGAAGCTGGAAGGGGGAAGGGAGCAGCATGGGTTACCAGATACTGTCCTCAGCAGT
AGCATGCAGATGGTTCTGTCAATGGGGTTCAGCTATCTGCAGGTGATTGAAGCTTACAGC
ATATTTGGGGACGATGCTGAATCTATGGCTTGTTACCTGGTGGAAACTGGGAGTAGCAGC
AGACGCAAAGGCAAGGCAACTGAATGA

Peptide Sequence

PEP ID

VIT_06s0080g00850.t01
PEP Infomation

pep chromosome:12X:6:20868712:20879612:1 gene:VIT_06s0080g00850 transcript:VIT_06s0080g00850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTRILVQRGSGSNPNRTSSLPSSSLAPSQPQAATQVPSTVKDEEVGEEVQEQTIVDDTLE
TCENKVTKTDDLLQESVRNDNANDDNVDGEKIVNDDVLGSGDLDQEFGGLRINEKLAVEN
EGSSADSSQIVNRSSYPPPPPVPPPKHWATNSNPMRFGSDGSNSVRIGSPRRAVAWPIVS
TRTSPTGSRPSSPRSHGESEGYNSADEQNSCFVSSYDDAERERQFEIDIRRAKGLEVKRM
VEDGNCLFRAVADQVYGDSEAYDLIRQMCIDYMERERDHFSQFITEGFMSYCKRKRRDKV
YGNNAEIQALSEMYNRPIHIYSYSTEPINIFHGSYDTDTPPIRLSYHHGNHYNSLVDPRR
LTIGAGLGFSSLRGVNVDKDQVKAAIKAQQDQQIDNALLAEGRFYSDLELTEKEIERMVM
EASRAEYLADDKFKSQLGCRESSSTSGAEPSSSGARPSGSETKLEGGREQHGLPDTVLSS
SMQMVLSMGFSYLQVIEAYSIFGDDAESMACYLVETGSSSRRKGKATE

Transcript Sequence

Transcript ID

VIT_06s0080g00850.t01
Transcript Infomation

cdna chromosome:12X:6:20868712:20879612:1 gene:VIT_06s0080g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGAGTCGCGCTGAGTCGACTCGAGGGTTTTATGGTTTTCTTTCTTTTTTCCTTTCTTTC
TGATTTGCGCTGATTTTGGTCTTTTTGGTGTTTGGTGGATGTCTGGTTTTGTTTTGTTTT
GTTTGTGTTTCTGTTTGTGTTTGTGTTTTTTTTTTTTTTGTTTTCTGTGGGTTATCGCGG
TTTGTTTTGGGGATTTCGATCTTTGCTTCTTGGTTTTACTCTCTGTTTGGTTGCCGAGAA
AATCGAGGGGAAGAAAAGGGAATGATGTTTGGGATTGGGGGGGCGTTTGCTGTTTTCTTG
GGATGGGAATCGCGGAAATTCTTGGATTTGGAAGTTTGATTTCTTTTCATTTCTTGTCCT
GTCTTTTTTTGGTAACCAAACGGAATTTGGCGGAGAAATATATATATATTTTTTGATTTT
CTTGGGAATTAATTATTTTGAATGCAGCTCGGTGCTTTTGGAGGTGAATTTTCAGGAATT
TTCCGGTAAATTCGACTTCTTAGAGGGTTTTCTTGTTTAAAGTTGGAGGTCTGGGTCTCA
TGAGAATTGTTAGGGGAATGCAGAGATTGATTCGTGAGGAGCAGAAGGCACCGTGCTGGA
ACAAATCATTTGGCCGGGGGATTGACATTAGCGCGCCTAAGGCAAGGACGCGTGATAAAC
CTATGCTCTAGGTTTTAAGTTTGTAAAATTGGGATTCTGGGAGGGAGATTGGGGATAGGG
TTTCAGTCGTGCAAGAGAAAGGATGACTCGGATTTTGGTTCAGCGTGGTTCTGGTTCGAA
CCCTAATCGCACTTCTTCCTTGCCCAGTTCTTCTTTGGCTCCATCCCAGCCTCAGGCCGC
TACTCAAGTTCCTTCTACTGTCAAAGATGAGGAAGTCGGAGAGGAGGTGCAGGAACAAAC
AATCGTGGATGATACCTTGGAGACTTGTGAGAATAAGGTGACGAAAACTGATGATCTTTT
GCAAGAAAGTGTCCGGAATGACAATGCAAATGATGATAATGTTGATGGTGAAAAGATTGT
TAATGATGATGTTCTGGGGTCTGGGGATTTGGATCAAGAGTTTGGTGGGTTGAGGATTAA
TGAGAAACTTGCAGTTGAAAATGAGGGCTCGAGTGCTGATTCTTCACAGATTGTTAACAG
GAGTTCCTATCCCCCTCCTCCTCCTGTCCCTCCCCCAAAACATTGGGCGACTAATTCAAA
TCCAATGAGATTTGGCTCAGACGGTTCAAATTCTGTACGGATTGGATCACCTAGAAGAGC
AGTTGCCTGGCCTATTGTTTCAACTAGGACTTCTCCAACTGGTTCACGGCCTTCCTCTCC
CAGGTCTCATGGTGAAAGTGAAGGTTACAATAGTGCTGATGAGCAGAATTCCTGCTTTGT
ATCCTCCTATGATGATGCTGAAAGAGAACGCCAATTTGAGATTGATATCAGGCGGGCAAA
AGGTTTAGAAGTCAAACGGATGGTGGAGGATGGGAACTGCCTCTTTCGTGCTGTTGCAGA
TCAGGTCTATGGGGACTCTGAAGCGTATGATTTGATTAGGCAAATGTGCATTGATTATAT
GGAGCGGGAGAGAGATCACTTTTCTCAATTCATAACAGAAGGTTTTATGTCTTACTGTAA
GAGGAAGAGAAGAGACAAGGTCTATGGAAACAATGCAGAGATCCAAGCTTTATCTGAAAT
GTATAATCGGCCTATCCATATATATTCCTATAGCACAGAACCTATCAACATTTTTCATGG
AAGCTATGATACTGACACACCTCCCATTCGATTAAGCTATCATCATGGGAATCATTACAA
CTCACTTGTTGATCCCCGGCGATTAACCATTGGTGCTGGGCTTGGATTTAGCTCTCTACG
TGGGGTGAATGTTGACAAGGATCAAGTCAAGGCTGCTATTAAAGCTCAACAAGACCAACA
AATTGATAATGCACTTCTAGCTGAGGGGCGGTTTTACTCGGATCTTGAGCTCACGGAGAA
GGAGATTGAACGTATGGTGATGGAAGCCTCTCGAGCTGAGTATCTTGCTGATGACAAATT
CAAGTCACAACTTGGCTGTAGAGAGTCTTCTTCTACGTCTGGTGCTGAACCATCGTCTTC
TGGAGCAAGGCCATCAGGGAGTGAGACGAAGCTGGAAGGGGGAAGGGAGCAGCATGGGTT
ACCAGATACTGTCCTCAGCAGTAGCATGCAGATGGTTCTGTCAATGGGGTTCAGCTATCT
GCAGGTGATTGAAGCTTACAGCATATTTGGGGACGATGCTGAATCTATGGCTTGTTACCT
GGTGGAAACTGGGAGTAGCAGCAGACGCAAAGGCAAGGCAACTGAATGAAAATAGCATGA
CAATATTATTAGGATGCGAGTGAGAGGTTATATTGGCTTCTTGTTGCTGACATTGTAGCT
TTAGTAAAGAAACTATTCCTATGTAGCAAGCAGCTAGCCTTTCTGAACTCTACTTATGGG
TTATTCAAGCCTAAATAAATAAAATGGATTTAGTGGTTA