Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00580.t01
CDS Infomation

cds chromosome:12X:6:20573145:20581026:-1 gene:VIT_06s0080g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACTGAGGTCCTCCATTTGCCTTCATCTCCAAGGTCCTCCGCCTTATCCAATGATGGT
TTTTTCCAGGCTCAGACTGCTGGTTCTGGTGGTCTAGGTGTGGAGGGGGATTCAAGGGTC
ACCGGCGCTGAGGGACAGAGGGTGAAGGATAGGGAACAGTTGTCTCTGTTGGCGCTGCTT
GTAACGCTGTTCAGGAAGTCTTTGGTTGTTTGCAAGACGGACAGGGAGGAGCTTTGCGCC
ATGGAGATCGGGTGGCCGACTAATGTGCGCCATGTTGCGCATGTTACCTTCGATCGGTTC
AATGGTTTCCTGGGCTTGCCTGTTGAGTTCGAACCTGAAGTTCCCAGGAGGGCTCCGAGT
GCCAGTGCAAATGTTTTTGGAGTTTCAACGGAATCCATGCAGTTGTCATTTGACTCCAGA
GGAAACAGTGTGCCAACAATACTCCTACTGATGCAAAGACGCTTGTATCTTCAAGGAGGC
TTGCAGGCAGAAGGGATTTTTAGAATTAATGCAGAAAACAGCCAGGAGGAGTATGTGAGA
GAGCAATTAAATAGGGGAGTGGTACCAGAAGGAATAGATTTACATTGTCTAGCAGGTCTT
ATTAAGGCTTGGTTTAGAGAACTCCCAACTGGGGTTTTGGACTCTCTGTCACCTGAGCAG
GTAATGCAATGCCAAGCAGAAGAGGAATGTGCAGAGCTCGTGAGGCTTCTGCCTCCTACG
GAAGCTGCTCTACTGGATTGGGCCATCAACCTCATGGCAGATGTCGTCCAGGAGGAGCAT
CTAAACAAAATGAATGCACGCAACATTGCAATGGTCTTTGCACCAAACATGACTCAGATG
GCAGATCCTCTGACTGCATTGATGTATGCTGTCCAAGTCATGAATTTCCTCAAGACACTT
ATCATAAAGACACTACGAGAAAGAGAAGATTCAATGGTAGAGCCGGCTCCTACTTCCAGC
CTTGAGCCATTTGATGAGAATGGACACCAGAGCCCTTCTCAGCCCACCTGGCTAGAAAAT
ACTGCACAAGACAATGAAGAGACAGAGCAAGCCTTCATCATGGAAGAACCTGTTTTAGAA
AGCCCCCCTTACTGTACTCAGAACAAGCACGTGGAGGATAGAGAAGCACATGGTTTTTTA
ACTTCTCTTGAGAAGTCGCTCCCTAACATGGATGGATCTTTTGAGACTCTAACTCAAGTT
GAAACATTCGTCGCTGAAACAGAAGTTTATGCGGTTGATAGTCCAAAAACTGGGGTTCAA
GCAAACCCTCTTAAGAGCAAAAGTGGCCAATCAAGTAATTCAAATATCAAAAAGGGTCCC
AAAACAATTAACAGGCAGCCATCTTCAGTTTGTGAACCGGGACCCCTGGAGAAGACCAAG
GGAATCAGCAATCTCAGCCGCATAAATTCAAGGACGGAGCGGATTGAAGCCTGGCGGTGA

Peptide Sequence

PEP ID

VIT_06s0080g00580.t01
PEP Infomation

pep chromosome:12X:6:20573145:20581026:-1 gene:VIT_06s0080g00580 transcript:VIT_06s0080g00580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTEVLHLPSSPRSSALSNDGFFQAQTAGSGGLGVEGDSRVTGAEGQRVKDREQLSLLALL
VTLFRKSLVVCKTDREELCAMEIGWPTNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRAPS
ASANVFGVSTESMQLSFDSRGNSVPTILLLMQRRLYLQGGLQAEGIFRINAENSQEEYVR
EQLNRGVVPEGIDLHCLAGLIKAWFRELPTGVLDSLSPEQVMQCQAEEECAELVRLLPPT
EAALLDWAINLMADVVQEEHLNKMNARNIAMVFAPNMTQMADPLTALMYAVQVMNFLKTL
IIKTLREREDSMVEPAPTSSLEPFDENGHQSPSQPTWLENTAQDNEETEQAFIMEEPVLE
SPPYCTQNKHVEDREAHGFLTSLEKSLPNMDGSFETLTQVETFVAETEVYAVDSPKTGVQ
ANPLKSKSGQSSNSNIKKGPKTINRQPSSVCEPGPLEKTKGISNLSRINSRTERIEAWR

Transcript Sequence

Transcript ID

VIT_06s0080g00580.t01
Transcript Infomation

cdna chromosome:12X:6:20573145:20581026:-1 gene:VIT_06s0080g00580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCTAAAAGCCAGTTAACAGAAAAAAGAGAAAAATAATGACTTCATGATTCTCACGTCCC
CCACTCTTCACAATACCATTTCTTCAAGTCCAACTTCTCTCTGATCTTCTTCTTCATTTC
CCTCTTTCTTTAATCCCAATTCAACTATATTTTTTTCGGATTTTTTTGGGATTTTTTAAT
CTTTTTTTCTCTGTGGGGGGTTTTTTCATTGCCAGCCATGACTGAGGTCCTCCATTTGCC
TTCATCTCCAAGGTCCTCCGCCTTATCCAATGATGGTTTTTTCCAGGCTCAGACTGCTGG
TTCTGGTGGTCTAGGTGTGGAGGGGGATTCAAGGGTCACCGGCGCTGAGGGACAGAGGGT
GAAGGATAGGGAACAGTTGTCTCTGTTGGCGCTGCTTGTAACGCTGTTCAGGAAGTCTTT
GGTTGTTTGCAAGACGGACAGGGAGGAGCTTTGCGCCATGGAGATCGGGTGGCCGACTAA
TGTGCGCCATGTTGCGCATGTTACCTTCGATCGGTTCAATGGTTTCCTGGGCTTGCCTGT
TGAGTTCGAACCTGAAGTTCCCAGGAGGGCTCCGAGTGCCAGTGCAAATGTTTTTGGAGT
TTCAACGGAATCCATGCAGTTGTCATTTGACTCCAGAGGAAACAGTGTGCCAACAATACT
CCTACTGATGCAAAGACGCTTGTATCTTCAAGGAGGCTTGCAGGCAGAAGGGATTTTTAG
AATTAATGCAGAAAACAGCCAGGAGGAGTATGTGAGAGAGCAATTAAATAGGGGAGTGGT
ACCAGAAGGAATAGATTTACATTGTCTAGCAGGTCTTATTAAGGCTTGGTTTAGAGAACT
CCCAACTGGGGTTTTGGACTCTCTGTCACCTGAGCAGGTAATGCAATGCCAAGCAGAAGA
GGAATGTGCAGAGCTCGTGAGGCTTCTGCCTCCTACGGAAGCTGCTCTACTGGATTGGGC
CATCAACCTCATGGCAGATGTCGTCCAGGAGGAGCATCTAAACAAAATGAATGCACGCAA
CATTGCAATGGTCTTTGCACCAAACATGACTCAGATGGCAGATCCTCTGACTGCATTGAT
GTATGCTGTCCAAGTCATGAATTTCCTCAAGACACTTATCATAAAGACACTACGAGAAAG
AGAAGATTCAATGGTAGAGCCGGCTCCTACTTCCAGCCTTGAGCCATTTGATGAGAATGG
ACACCAGAGCCCTTCTCAGCCCACCTGGCTAGAAAATACTGCACAAGACAATGAAGAGAC
AGAGCAAGCCTTCATCATGGAAGAACCTGTTTTAGAAAGCCCCCCTTACTGTACTCAGAA
CAAGCACGTGGAGGATAGAGAAGCACATGGTTTTTTAACTTCTCTTGAGAAGTCGCTCCC
TAACATGGATGGATCTTTTGAGACTCTAACTCAAGTTGAAACATTCGTCGCTGAAACAGA
AGTTTATGCGGTTGATAGTCCAAAAACTGGGGTTCAAGCAAACCCTCTTAAGAGCAAAAG
TGGCCAATCAAGTAATTCAAATATCAAAAAGGGTCCCAAAACAATTAACAGGCAGCCATC
TTCAGTTTGTGAACCGGGACCCCTGGAGAAGACCAAGGGAATCAGCAATCTCAGCCGCAT
AAATTCAAGGACGGAGCGGATTGAAGCCTGGCGGTGAAGCTCAACAAGGGTCTGGCATGA
CTGATTCTATGACGAGTTGGCAGTGTAAGTCTGTTTGATTTGGAAGTTGTGAAAGTAAGT
TTGTTAAAATTGTTCATGCATGTTTTGTGCTGTGGGGTGGTTTGCTCAACCTGTTTTGAT
TTCAAGGATAACATCTGTATGCTACGATACTAACATTTTCTGCTTTCCAAAAATGCATTT
GAATCCAATGGATATAATCTTCATGGGTTTGGTCATATGTCCCATGACTGACCTTTTTTC
TGGTACCCCAAGCAAAAAAACGCC