Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00470.t01
CDS Infomation

cds chromosome:12X:6:20432141:20450865:-1 gene:VIT_06s0080g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCAAGGGCAAAGGGAAATGCATCAGCAACCTGTAAGCCAGTTGAACCTGAAAAGCTA
AGCGAGCCTGAAAAGCCAATTGAGTCTGATGAGAGGGTGGATCTTGATGAAGACAATGAT
CCTGATGAGGCAATGGATGAAGAGGTCGAGTATGAAGAAGTAGAGGTAGAAGAAGAAGTG
GAAGAAGTGGAAGAAGAGGTAGAGGAAGAGGAAGTGGAAGAAGAAGAAGAAGAAGTAGAG
GAAGAAGAGGAAGAAGAAGAGGCTAATGAAGCTGATGAACAGAAAAGCCCAAGTGGTGGT
GGAGGGAAGATTGAAGACGAGGATGAGAGCAAAAAACATGCTGAGCTTCTTGCCCTGCCA
CCTCATGGTTCTGAAGTATATGTTGGCGGTATTTCACAAGATGCTTCTGAGGAGGACTTG
AAGAGCTTTTGCGAGTCTGTAGGAGAAGTAACTGAAGTCAGAATAATGAAAGGCAAAGAT
TCGGGTGAGAACAAGGGCTTTGCATTTGTGACCTTTAGAAATGTAGAATTGGCTTCTAAA
GCAATTGAGGAGCTGAATAATACTGAATTTAAGGGGAGAAAAATAAAATGTTCAACATCT
CAAGCAAAGCATCGTCTGTTCATTGGTAATGTTCCTAGAAGCTGGGGAGAAGAAGATATA
AAGAAGGTGGTGACTGAGATTGGACCTGGAGTTACAGCTGTTGAACTGGTGAAGGATATG
AAGAACTCTAGCAACAACCGTGGCTTTGCTTTTATTGACTATTATAACCACGCATGTGCT
GAATATTCGAGGCAGAAGATGATGAACCCGAAATTCAAACTAGACAATAATGCTCCTACT
GTGAGCTGGGCTGACCCTAAGAATGCTGATTCTTCTCCTGCTTCACAGGTGAAAGCAGTA
TACGTGAAGAATTTGCCAAAGAACATAACCCAAGATCAGCTAAAGCAGCTTTTTGAACAC
CATGGAAAAATCACGAAAGTGGTTTTACCACCAGCAAAATCTGGACAGGAAAAGAGTAGA
ATTGGTTTTGTACACTTTGCAGAGAGGTCAAGTGCTATGAAAGCTCTTAAGAACACTGAG
AAATATGAGATAGATGGCCAGGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGATCAG
AAATCTGTTGGTGGATCTAATTCACAAAAATCAGGTTTGCTTTCAAGTTATCCACCTCGT
GTAGGTTATGGTTTTGTTGGTGGTGCCTATGGTGCTCTAGGTGCAGGTTATGGCACAGCA
GGCTTTGCACAGCCCCTGATCTATGGGAGGGGACCAACTCCTGCTGGTATGGCAATGATG
CCAATGCTTCTCCCTGACGGGCGGATTGGATATGTCTTGCAACAGCCAGGAGCACAGCCA
CACACCCCACCTTCACATCAGAGAAGTAGTGGCAGGGGTGGGAGTGGGAGTGGCAGCAAG
AGTGGTGGGAGCTCTAGCAGGGGAAGGCACAACAACGATGGTGGCCATGGAAGGAGGTAT
CACCCATATTAA

Peptide Sequence

PEP ID

VIT_06s0080g00470.t01
PEP Infomation

pep chromosome:12X:6:20432141:20450865:-1 gene:VIT_06s0080g00470 transcript:VIT_06s0080g00470.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPRAKGNASATCKPVEPEKLSEPEKPIESDERVDLDEDNDPDEAMDEEVEYEEVEVEEEV
EEVEEEVEEEEVEEEEEEVEEEEEEEEANEADEQKSPSGGGGKIEDEDESKKHAELLALP
PHGSEVYVGGISQDASEEDLKSFCESVGEVTEVRIMKGKDSGENKGFAFVTFRNVELASK
AIEELNNTEFKGRKIKCSTSQAKHRLFIGNVPRSWGEEDIKKVVTEIGPGVTAVELVKDM
KNSSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDNNAPTVSWADPKNADSSPASQVKAV
YVKNLPKNITQDQLKQLFEHHGKITKVVLPPAKSGQEKSRIGFVHFAERSSAMKALKNTE
KYEIDGQVLECSLAKPQADQKSVGGSNSQKSGLLSSYPPRVGYGFVGGAYGALGAGYGTA
GFAQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGAQPHTPPSHQRSSGRGGSGSGSK
SGGSSSRGRHNNDGGHGRRYHPY

Transcript Sequence

Transcript ID

VIT_06s0080g00470.t01
Transcript Infomation

cdna chromosome:12X:6:20432141:20450865:-1 gene:VIT_06s0080g00470 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCTCAACTTCCAAAGAATCTCTCTGCCGATAGCTTTTTCGGGAAGCGGCACTAATTGTT
GCCTTGCAAGCTTACTTAATTAGATACATAAGATGCCAAGGGCAAAGGGAAATGCATCAG
CAACCTGTAAGCCAGTTGAACCTGAAAAGCTAAGCGAGCCTGAAAAGCCAATTGAGTCTG
ATGAGAGGGTGGATCTTGATGAAGACAATGATCCTGATGAGGCAATGGATGAAGAGGTCG
AGTATGAAGAAGTAGAGGTAGAAGAAGAAGTGGAAGAAGTGGAAGAAGAGGTAGAGGAAG
AGGAAGTGGAAGAAGAAGAAGAAGAAGTAGAGGAAGAAGAGGAAGAAGAAGAGGCTAATG
AAGCTGATGAACAGAAAAGCCCAAGTGGTGGTGGAGGGAAGATTGAAGACGAGGATGAGA
GCAAAAAACATGCTGAGCTTCTTGCCCTGCCACCTCATGGTTCTGAAGTATATGTTGGCG
GTATTTCACAAGATGCTTCTGAGGAGGACTTGAAGAGCTTTTGCGAGTCTGTAGGAGAAG
TAACTGAAGTCAGAATAATGAAAGGCAAAGATTCGGGTGAGAACAAGGGCTTTGCATTTG
TGACCTTTAGAAATGTAGAATTGGCTTCTAAAGCAATTGAGGAGCTGAATAATACTGAAT
TTAAGGGGAGAAAAATAAAATGTTCAACATCTCAAGCAAAGCATCGTCTGTTCATTGGTA
ATGTTCCTAGAAGCTGGGGAGAAGAAGATATAAAGAAGGTGGTGACTGAGATTGGACCTG
GAGTTACAGCTGTTGAACTGGTGAAGGATATGAAGAACTCTAGCAACAACCGTGGCTTTG
CTTTTATTGACTATTATAACCACGCATGTGCTGAATATTCGAGGCAGAAGATGATGAACC
CGAAATTCAAACTAGACAATAATGCTCCTACTGTGAGCTGGGCTGACCCTAAGAATGCTG
ATTCTTCTCCTGCTTCACAGGTGAAAGCAGTATACGTGAAGAATTTGCCAAAGAACATAA
CCCAAGATCAGCTAAAGCAGCTTTTTGAACACCATGGAAAAATCACGAAAGTGGTTTTAC
CACCAGCAAAATCTGGACAGGAAAAGAGTAGAATTGGTTTTGTACACTTTGCAGAGAGGT
CAAGTGCTATGAAAGCTCTTAAGAACACTGAGAAATATGAGATAGATGGCCAGGTTTTGG
AGTGTTCTCTTGCAAAGCCACAGGCAGATCAGAAATCTGTTGGTGGATCTAATTCACAAA
AATCAGGTTTGCTTTCAAGTTATCCACCTCGTGTAGGTTATGGTTTTGTTGGTGGTGCCT
ATGGTGCTCTAGGTGCAGGTTATGGCACAGCAGGCTTTGCACAGCCCCTGATCTATGGGA
GGGGACCAACTCCTGCTGGTATGGCAATGATGCCAATGCTTCTCCCTGACGGGCGGATTG
GATATGTCTTGCAACAGCCAGGAGCACAGCCACACACCCCACCTTCACATCAGAGAAGTA
GTGGCAGGGGTGGGAGTGGGAGTGGCAGCAAGAGTGGTGGGAGCTCTAGCAGGGGAAGGC
ACAACAACGATGGTGGCCATGGAAGGAGGTATCACCCATATTAAACTGCAGGGGAGAGCA
GCGGCAATGGTTCCAATTTACTGCTTACCTTGAGTGCCCATTGTGGAGGGAATTAGGTGT
GAGGACAGAGGGAGGGAATCTCTTTGCTCCTATTCCTATGTGTGATTTCTACTATTATGC
CATTTGAGATTATTTAGTGTTTCACTATAAGTAGTATTTAACCTTCAACTCCATAAACAT
TCTTCTTGTCTTGTTG