Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00360.t01
CDS Infomation

cds chromosome:12X:6:20304714:20311349:-1 gene:VIT_06s0080g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGACTCATAGGGTTGGAGAGACTAATTTATCAGGCTCAGCACCTTCAAACCACCAT
CTTCCATATGCAGTTCTTCATGGCATCAGCCCTCCTGCTGCAACTTTCATCAATCAAGAA
GGATCTGCCTTTGATTTTGGGGAGCTGGAAGAAGCAATTGTGCTGCAAGGTGTTAAGATT
AGAAATGATGAAGCTAAAACTTCTTTATTCACAGCCAGGCCTGCAGCTACTCTGGAAATG
TTCCCTTCATGGCCAATGAGATTCCAGCAAACCCAAAGAGGAAGTTCAAAGTCAGGAGGA
GAGAGCACTGACTCAGGATCAGCAGTGAACACTCTTTCAAGTAGAGCTGAGGCCCAGTTG
GAACCGGAATCTCCTATCAGTATAAAGCCAACGTCTGATCACCAGGCTTTTGATCAGAAG
CATCTGCAGTTTCAACATCAACAGCAGTTAGAGATGGCAAGTGATACTTCTAGATTAGCA
GGACCATCAGAATCTCAACCAGCTGCTTCTAAACCACCCCCGGAAAAGAGGAAAGGAGCT
GGATCAACGTCAGAGAAAACGCTTGATGCCAAGACACTGAGACGTTTGGCACAAAACAGA
GAAGCAGCAAGAAAGAGTAGGCTGAGAAAGAAGGCGTATGTGCAGCAGCTAGAATCCAGT
AGGATTAAGCTCACTCAGCTTGAACAAGACCTTCAACGAGCCAGATCCCAGGGGTTGTTC
TTGGGAGGAGGAGGAGGAGGTGGTGGTGGTGGGGGAGCTGGTGGAATTATAAGCCCTGGA
GCTGCAATCTTTGATATGGAATATGCAAGATGGCTCGAGGATGATCACCGGCACATGTCG
GAGCTTAGAACAGGCTTGCAGGCGCATTTGTTGGATGGCGATCTTAGGGTAATAGTTGAT
GGATATCTCTCTCACTATGATGAGATTTTTCGACTTAAGGGAGTGGCTGCTAAATCAGAT
GTTTTTCACCTCATTACTGGAATGTGGACAACTCCCGCTGAGCGTTGCTTCCTTTGGATG
GGCGGTTTCCGGCCGTCTGATCTCATCAAGATGTTAATAGCACAATTAGACCCCCTAACA
GAGCAGCAAGTTATGGGGATTTATGGTCTCCAACATTCCTCACAACAAGCAGAAGAGGCT
CTCTCCCAGGGTCAGGAGCAGCTCCAACAATCTCTCATCGACACCATTGCCAGCGGCTCG
GTTGCCGATGATATGGCTCATATGGTTATGGCTTTGGGCCAGCTTACCAACCTTGAAGGC
TTTGTTCGCCAGGCTGATAATTTGAGACAGCAAACCATTCACCAATTGTGTCGGATACTG
ACAGTTCGACAAGCAGCACGTTGTTTTTTGGTGATTGGCGAGTACTATGGCCGATTACGA
GCCCTCAGCTCCCTTTGGGCATCACGGCCCCGAGAGGCCATGATGGGCGACGAGCACTCA
TGCCAAACAACGACAGATTTGCATATGGTGCAGTCTTCACATAGTCATTTCACCAACTTT
TGA

Peptide Sequence

PEP ID

VIT_06s0080g00360.t01
PEP Infomation

pep chromosome:12X:6:20304714:20311349:-1 gene:VIT_06s0080g00360 transcript:VIT_06s0080g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATHRVGETNLSGSAPSNHHLPYAVLHGISPPAATFINQEGSAFDFGELEEAIVLQGVKI
RNDEAKTSLFTARPAATLEMFPSWPMRFQQTQRGSSKSGGESTDSGSAVNTLSSRAEAQL
EPESPISIKPTSDHQAFDQKHLQFQHQQQLEMASDTSRLAGPSESQPAASKPPPEKRKGA
GSTSEKTLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQDLQRARSQGLF
LGGGGGGGGGGGAGGIISPGAAIFDMEYARWLEDDHRHMSELRTGLQAHLLDGDLRVIVD
GYLSHYDEIFRLKGVAAKSDVFHLITGMWTTPAERCFLWMGGFRPSDLIKMLIAQLDPLT
EQQVMGIYGLQHSSQQAEEALSQGQEQLQQSLIDTIASGSVADDMAHMVMALGQLTNLEG
FVRQADNLRQQTIHQLCRILTVRQAARCFLVIGEYYGRLRALSSLWASRPREAMMGDEHS
CQTTTDLHMVQSSHSHFTNF

Transcript Sequence

Transcript ID

VIT_06s0080g00360.t01
Transcript Infomation

cdna chromosome:12X:6:20304714:20311349:-1 gene:VIT_06s0080g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAAGAAGAAGAAAGAGATAAAAAGACCCCATGAGAGATCAAAAGGTGCTAGGAGATA
TATATCCAAAGGAAAGACTGGACCCTCTTGTGCGTGCTACTTAGATATACTTTTTGACAA
GAAAGCTTTCATCTTTCCTTTCTTTCACTCTTCCCAAACATGATTTCATTCACCTTTGTG
CTGCTTGTTGGAGAAAGATGAGAGAATAGTCTGAAGAGGCCTTGCATGGCGACTCATAGG
GTTGGAGAGACTAATTTATCAGGCTCAGCACCTTCAAACCACCATCTTCCATATGCAGTT
CTTCATGGCATCAGCCCTCCTGCTGCAACTTTCATCAATCAAGAAGGATCTGCCTTTGAT
TTTGGGGAGCTGGAAGAAGCAATTGTGCTGCAAGGTGTTAAGATTAGAAATGATGAAGCT
AAAACTTCTTTATTCACAGCCAGGCCTGCAGCTACTCTGGAAATGTTCCCTTCATGGCCA
ATGAGATTCCAGCAAACCCAAAGAGGAAGTTCAAAGTCAGGAGGAGAGAGCACTGACTCA
GGATCAGCAGTGAACACTCTTTCAAGTAGAGCTGAGGCCCAGTTGGAACCGGAATCTCCT
ATCAGTATAAAGCCAACGTCTGATCACCAGGCTTTTGATCAGAAGCATCTGCAGTTTCAA
CATCAACAGCAGTTAGAGATGGCAAGTGATACTTCTAGATTAGCAGGACCATCAGAATCT
CAACCAGCTGCTTCTAAACCACCCCCGGAAAAGAGGAAAGGAGCTGGATCAACGTCAGAG
AAAACGCTTGATGCCAAGACACTGAGACGTTTGGCACAAAACAGAGAAGCAGCAAGAAAG
AGTAGGCTGAGAAAGAAGGCGTATGTGCAGCAGCTAGAATCCAGTAGGATTAAGCTCACT
CAGCTTGAACAAGACCTTCAACGAGCCAGATCCCAGGGGTTGTTCTTGGGAGGAGGAGGA
GGAGGTGGTGGTGGTGGGGGAGCTGGTGGAATTATAAGCCCTGGAGCTGCAATCTTTGAT
ATGGAATATGCAAGATGGCTCGAGGATGATCACCGGCACATGTCGGAGCTTAGAACAGGC
TTGCAGGCGCATTTGTTGGATGGCGATCTTAGGGTAATAGTTGATGGATATCTCTCTCAC
TATGATGAGATTTTTCGACTTAAGGGAGTGGCTGCTAAATCAGATGTTTTTCACCTCATT
ACTGGAATGTGGACAACTCCCGCTGAGCGTTGCTTCCTTTGGATGGGCGGTTTCCGGCCG
TCTGATCTCATCAAGATGTTAATAGCACAATTAGACCCCCTAACAGAGCAGCAAGTTATG
GGGATTTATGGTCTCCAACATTCCTCACAACAAGCAGAAGAGGCTCTCTCCCAGGGTCAG
GAGCAGCTCCAACAATCTCTCATCGACACCATTGCCAGCGGCTCGGTTGCCGATGATATG
GCTCATATGGTTATGGCTTTGGGCCAGCTTACCAACCTTGAAGGCTTTGTTCGCCAGGCT
GATAATTTGAGACAGCAAACCATTCACCAATTGTGTCGGATACTGACAGTTCGACAAGCA
GCACGTTGTTTTTTGGTGATTGGCGAGTACTATGGCCGATTACGAGCCCTCAGCTCCCTT
TGGGCATCACGGCCCCGAGAGGCCATGATGGGCGACGAGCACTCATGCCAAACAACGACA
GATTTGCATATGGTGCAGTCTTCACATAGTCATTTCACCAACTTTTGATCAAGATATCTA
TATATAGCTGCCCAGATGATCGAAAGGCCAATATCTTCTCCTTACTGGTGGCATTGTTGG
ATTTGTTGAAGCTACTTTAGAGGGAGA