Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00320.t01
CDS Infomation

cds chromosome:12X:6:20237712:20240465:1 gene:VIT_06s0080g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTGGCTGTGGCAGCTCTGGTGCTGGGGGTGGGTGTTCTGGTATGGGCATATCAAGCA
GTGACCCCTCCGCCTCCAAAGATATGTGGCTCTCCGAATGGCCCGCCTGTTACTTCACCA
AGAATCAAGCTCAGTGATGGAAGGTATCTGGCTTACAAAGAGAGAGGCGTTCCTAAGGAA
CAGGCCAAATATAAAGTCATCCTCGTTCATGGCTTTGATAGCTCCAAAGACATCTATTTG
CCATTATCTCAGGATCTGATTGATGAGCTGGGTCTATACCTTGTGACATATGACAGAGCT
GGGTACGGAGAAAGTGATCCAAACCCAAAGCGGTCAGTGAAGAGCGAAGCATTCGATCTG
CAGGAACTTGCTGATCAGTTAGAGCTAGGCCCCAAGTTTCATGTGATTGGGATCTCCATT
GGAACTTACAGCATTTGGGCTTGCCTCAAATACATACCACACAGGCTGGCTGGTGTGGCT
CTAGTAGTTCCTGTCATCAATTACTGGTGGCTATCTTTTCCTTCAGAACTCTTCTCCAAG
AACTACAAGAAACAATTGGCCAGGGATCAATGGAAGCTTGGCATTGCACACTATACTCCT
GGACTAACATACTGGTGGCTGACCCAGAAGTGGTTCCCTTCATCATCCATCTTGGAGAGA
CACCCAATAATTTTCAGCAAACAAGATGTAGAAATCATACAGACAATATCAAAGATTCCA
ATGCCAGATGAGCATAAGATACGACAACAAGGTGTTTATGAGTCCCTTCATCGAGACATA
ATGGTGCATTTTGGAAAGTGGGATTTCGACCCAATGGAACTGAAAAATCCCTTCCCTAAC
AATGAGGGATCTGTTCACCTCTGGCAAGGCCACAAAGACTCGCTCGTGCCATTTGAAATG
CAACGATACCTCGCCCAGAAGCTACCTTGGATTCAGTATCATGAACTCCCTGATAGTGGC
CACTTGATCATTCATCACAACAAGCTGTGTGAAGCCATCTTCAGGTCACTTTTGCTAGGA
GAAGAATGCTCTGTCTCCCAAAATGGTGTTCCACATTGA

Peptide Sequence

PEP ID

VIT_06s0080g00320.t01
PEP Infomation

pep chromosome:12X:6:20237712:20240465:1 gene:VIT_06s0080g00320 transcript:VIT_06s0080g00320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLAVAALVLGVGVLVWAYQAVTPPPPKICGSPNGPPVTSPRIKLSDGRYLAYKERGVPKE
QAKYKVILVHGFDSSKDIYLPLSQDLIDELGLYLVTYDRAGYGESDPNPKRSVKSEAFDL
QELADQLELGPKFHVIGISIGTYSIWACLKYIPHRLAGVALVVPVINYWWLSFPSELFSK
NYKKQLARDQWKLGIAHYTPGLTYWWLTQKWFPSSSILERHPIIFSKQDVEIIQTISKIP
MPDEHKIRQQGVYESLHRDIMVHFGKWDFDPMELKNPFPNNEGSVHLWQGHKDSLVPFEM
QRYLAQKLPWIQYHELPDSGHLIIHHNKLCEAIFRSLLLGEECSVSQNGVPH

Transcript Sequence

Transcript ID

VIT_06s0080g00320.t01
Transcript Infomation

cdna chromosome:12X:6:20237712:20240465:1 gene:VIT_06s0080g00320 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTGAACTTGCAGAAAGTTTTTATTTCTTCCTTTTCTACACTCAAAGAAAGGCTGATAG
TCAGGTACCAGCTAGAAGTCAGAAAATGATCTTATGACTGCTCCAAGGCTCTTTCTATAA
TAAGCCCCCTTCACCCCCCAGAAAAGTAATTGTAAATTTCTGTAGAGAGCAAGGAGCAGT
GATATTCAGGGATGCTGGCTGTGGCAGCTCTGGTGCTGGGGGTGGGTGTTCTGGTATGGG
CATATCAAGCAGTGACCCCTCCGCCTCCAAAGATATGTGGCTCTCCGAATGGCCCGCCTG
TTACTTCACCAAGAATCAAGCTCAGTGATGGAAGGTATCTGGCTTACAAAGAGAGAGGCG
TTCCTAAGGAACAGGCCAAATATAAAGTCATCCTCGTTCATGGCTTTGATAGCTCCAAAG
ACATCTATTTGCCATTATCTCAGGATCTGATTGATGAGCTGGGTCTATACCTTGTGACAT
ATGACAGAGCTGGGTACGGAGAAAGTGATCCAAACCCAAAGCGGTCAGTGAAGAGCGAAG
CATTCGATCTGCAGGAACTTGCTGATCAGTTAGAGCTAGGCCCCAAGTTTCATGTGATTG
GGATCTCCATTGGAACTTACAGCATTTGGGCTTGCCTCAAATACATACCACACAGGCTGG
CTGGTGTGGCTCTAGTAGTTCCTGTCATCAATTACTGGTGGCTATCTTTTCCTTCAGAAC
TCTTCTCCAAGAACTACAAGAAACAATTGGCCAGGGATCAATGGAAGCTTGGCATTGCAC
ACTATACTCCTGGACTAACATACTGGTGGCTGACCCAGAAGTGGTTCCCTTCATCATCCA
TCTTGGAGAGACACCCAATAATTTTCAGCAAACAAGATGTAGAAATCATACAGACAATAT
CAAAGATTCCAATGCCAGATGAGCATAAGATACGACAACAAGGTGTTTATGAGTCCCTTC
ATCGAGACATAATGGTGCATTTTGGAAAGTGGGATTTCGACCCAATGGAACTGAAAAATC
CCTTCCCTAACAATGAGGGATCTGTTCACCTCTGGCAAGGCCACAAAGACTCGCTCGTGC
CATTTGAAATGCAACGATACCTCGCCCAGAAGCTACCTTGGATTCAGTATCATGAACTCC
CTGATAGTGGCCACTTGATCATTCATCACAACAAGCTGTGTGAAGCCATCTTCAGGTCAC
TTTTGCTAGGAGAAGAATGCTCTGTCTCCCAAAATGGTGTTCCACATTGATCCAACCAAC
TACTACAAGCCTGTTTTTTCATAAATTGACAATTCTGCTCTGCATTTGTATGTGGAAATA
TCTGAAGGCTTGGATTCTTGAGCATTGTTTATTTGTTTCGTTGTGCAATTTTCAGGGTGT
TTTTTTATCCAATTACATGTGCTTCTTTTCAAAGAAAAGATGATCTCAGTACAAGTTTAT
AATAAAATAATCTTTTAAAA