Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0080g00230.t01
CDS Infomation

cds chromosome:12X:6:20025215:20027989:1 gene:VIT_06s0080g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAGAGCGGGAAGAAGCAGAGACAGCAACAGAAGCCTCCAAGAGGTTCCTACTTT
CCTCAAGAAGAAGACGATGAAGGCCATCATCATCACTATCACTATAGTGATGAAACTCTC
CAATCGTCTTCTAGAGGTATCAACATTGAAGACGACAAAGAAGTTGAAGATGAAGATGAA
GTACAAGAAGAAGATGGTGCTGATCCAAACCCATTAACAGATGATATGCCGTCCAAGTTC
CTACTCTATCAGCAATCTGTTCAGTCGCCCAAAGGAGACATCAGCTATCTGCAGAAGTTC
TTTCTGATGTATGTGGGTGGGAGAGTGCCTCTCCATCTCCAGGAAGATTTTTGCGGCACC
GCTCTTCTTAGTACAGAATGGCTCCGGAGTGACCCACGGCGAACAGCTGTAGGATTGGAT
TTGGATGTTGAGGCACTTGATTGGTGCATGGAAAACAATGTGAATAAAATTGGGGCTGAT
GGATACTCCCGATTATCCTTGTTTCATGGGAATGTTCTGCAACCTCTTGAGTCTAAGCTA
GTAAAATCCCAGCTTTCAGACATCATTAGAAACTTTACATTGGAAGATAGCATTGCTGAT
TCAGGGACTGTTCCATTGGACTCTAACATACAAGCATGCCCTAATGCTTCTACCGATGGT
GAGATCATAAAAAGAAACTTCGGACTGCCTGCAAGAGACATAGTGTGTGCTTTTAACTAC
AGCTGCTGTTGTCTCCATAAACGTGGAGAGCTGGTCTTGTATTTCAAGCATGTCCTTGAT
GTCTTATCCAAAAAGGGTGGCATATTTGTGATGGACTTGTATGGAGGCACATCATCAGAG
TGCAAGCTGAGGCTTCAGAGGAGATTTCCCAATTTTACGTATTACTGGGAGCAAGCTGAA
TTTGACATCATTCAACGCAAGACAAGAATTAGCCTCCATTTTCATCTCCAGAAACAGCAG
AGAAAACTTCGCCATGCATTTTCATACAGCTGGAGGCTGTGGTCGTTGCCCGAGATTAAA
GACTGCTTAGAAGAGGCTGGATTTCATTCCGTCCATTTTTGGATTCGACAAATGCCCGAT
ACTGAAGAAAACAGAAGCACGGAGGGATTTGGTATTGGGCAAGATGTGAAATATGAAGAG
GTTGCAAGTTTTCAGCAACAAGATGCATGGAATGCATATATTGTGGGTGTTGTAAAATGA

Peptide Sequence

PEP ID

VIT_06s0080g00230.t01
PEP Infomation

pep chromosome:12X:6:20025215:20027989:1 gene:VIT_06s0080g00230 transcript:VIT_06s0080g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKSGKKQRQQQKPPRGSYFPQEEDDEGHHHHYHYSDETLQSSSRGINIEDDKEVEDEDE
VQEEDGADPNPLTDDMPSKFLLYQQSVQSPKGDISYLQKFFLMYVGGRVPLHLQEDFCGT
ALLSTEWLRSDPRRTAVGLDLDVEALDWCMENNVNKIGADGYSRLSLFHGNVLQPLESKL
VKSQLSDIIRNFTLEDSIADSGTVPLDSNIQACPNASTDGEIIKRNFGLPARDIVCAFNY
SCCCLHKRGELVLYFKHVLDVLSKKGGIFVMDLYGGTSSECKLRLQRRFPNFTYYWEQAE
FDIIQRKTRISLHFHLQKQQRKLRHAFSYSWRLWSLPEIKDCLEEAGFHSVHFWIRQMPD
TEENRSTEGFGIGQDVKYEEVASFQQQDAWNAYIVGVVK

Transcript Sequence

Transcript ID

VIT_06s0080g00230.t01
Transcript Infomation

cdna chromosome:12X:6:20025215:20027989:1 gene:VIT_06s0080g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAAAAAATGGGAAAGAGCGGGAAGAAGCAGAGACAGCAACAGAAGCCTCCAAGAGGTTC
CTACTTTCCTCAAGAAGAAGACGATGAAGGCCATCATCATCACTATCACTATAGTGATGA
AACTCTCCAATCGTCTTCTAGAGGTATCAACATTGAAGACGACAAAGAAGTTGAAGATGA
AGATGAAGTACAAGAAGAAGATGGTGCTGATCCAAACCCATTAACAGATGATATGCCGTC
CAAGTTCCTACTCTATCAGCAATCTGTTCAGTCGCCCAAAGGAGACATCAGCTATCTGCA
GAAGTTCTTTCTGATGTATGTGGGTGGGAGAGTGCCTCTCCATCTCCAGGAAGATTTTTG
CGGCACCGCTCTTCTTAGTACAGAATGGCTCCGGAGTGACCCACGGCGAACAGCTGTAGG
ATTGGATTTGGATGTTGAGGCACTTGATTGGTGCATGGAAAACAATGTGAATAAAATTGG
GGCTGATGGATACTCCCGATTATCCTTGTTTCATGGGAATGTTCTGCAACCTCTTGAGTC
TAAGCTAGTAAAATCCCAGCTTTCAGACATCATTAGAAACTTTACATTGGAAGATAGCAT
TGCTGATTCAGGGACTGTTCCATTGGACTCTAACATACAAGCATGCCCTAATGCTTCTAC
CGATGGTGAGATCATAAAAAGAAACTTCGGACTGCCTGCAAGAGACATAGTGTGTGCTTT
TAACTACAGCTGCTGTTGTCTCCATAAACGTGGAGAGCTGGTCTTGTATTTCAAGCATGT
CCTTGATGTCTTATCCAAAAAGGGTGGCATATTTGTGATGGACTTGTATGGAGGCACATC
ATCAGAGTGCAAGCTGAGGCTTCAGAGGAGATTTCCCAATTTTACGTATTACTGGGAGCA
AGCTGAATTTGACATCATTCAACGCAAGACAAGAATTAGCCTCCATTTTCATCTCCAGAA
ACAGCAGAGAAAACTTCGCCATGCATTTTCATACAGCTGGAGGCTGTGGTCGTTGCCCGA
GATTAAAGACTGCTTAGAAGAGGCTGGATTTCATTCCGTCCATTTTTGGATTCGACAAAT
GCCCGATACTGAAGAAAACAGAAGCACGGAGGGATTTGGTATTGGGCAAGATGTGAAATA
TGAAGAGGTTGCAAGTTTTCAGCAACAAGATGCATGGAATGCATATATTGTGGGTGTTGT
AAAATGATTCTTGAGATTTTATCTGATAGCCCTTGGGTTGATGTCGTGTTGGTTCTAACA
GCAGTGGAAAGAATAAATGATCTCAAAACCTGGTAAATCAGAGGTATATTCACAATTGTA
AACTTTTGTTGAATTTGAATGATTAATTCACTGCCAAAATTTTCCTTTT