Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g01590.t01
CDS Infomation

cds chromosome:12X:6:19509031:19533720:1 gene:VIT_06s0061g01590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCTTTAACTCATCCTTTGGCACAGCTGTTCTCTAAGACCTCAAAAGTTCTTGAA
GACAAACAACCCCTCATCCAAAACCTCCATCTACATAAGAAGAAATTAATGCTACTCAGA
CAACATGCTGATTTCTTACTTTTTGTTTCCATTTTTAAAGGACATTTGAAGTTTTGGAAG
AAGACAGCTATTGGCATTGAATTTGCAAAGCATTTTAGATCCCATCTTAATGCCATTGAA
GGGTTAGCTGTTAGTGTTGATGGTTTGCTTTGCTGCACAATTTCCAATGATGACTCTGTG
AAAGTATATGATGTAGTGAACTATGACATGATGGTCATGATTCGCTTACCATTTGTTCCT
GGTGCTGTTGAATGGGTTTCCAAACAAGGCGATGTCAAAGCTAGGCTTGCCATTAGTGAT
CGTAACTCTTCGTTTGTGCATGTGTATGATGCACGAGCTGGTTCAAATGAACCCATCATC
TCGAGAGAGATCCACTTGGGCCCAATAAAAGTTATGAAGTACAATCATGTTTTTGACTCT
GTGATATCTGCAGATGCCAATGGAATCATTGAGTACTGGAACCCTAATACACTTCAGTTC
CCAGAGAATGAGGTGAACTTTAGATTGAAAAGTGATACGAATCTCTTTGAAATTGTGAAA
TGTAAAACAACTGTTTCTTCGATTGAGGTGAGCCCTGATGGTAAACAGTTTTCTATCACA
TCACCTGATCATAGGATCCGTATTTTTTGGTTTAAAACTGGTAAACTAAGACGGGTTTAT
GATGAATCCCTTGAGGTGGCCCAAGATCTTCAGAGAAGTGATGCTCCCTTATACCGGCTG
GAAGCTATTGATTTTGGGAGAAGGATGGCTGTTGAGAAGGAAATTGAGAAAACAGAAAGT
GCACCACAACCAAATGCAATATTTGATGGAAGCTCTAACTTCCTTATATATGCAACACTC
CTTGGAATAAAAGTAGTAAACCTACATACAAATAAAGTTGCTCGAATTCTTGGAAAGGTG
GAGAACAACGATAGATTCCTGAGAATTGCTTTGTATCAAGGTGACCGTAGCAGTAAAAAG
GTTAGAAAAATTCCTGCAGCTGCAGCAAATGTCAATGAGAGCAAAGAACCTTTGACAGAT
CCCACTCTCTTATGCTGCGCTTTCAAGAAACATAGGATCTATTTGTTCAGTCGGAGAGAA
CCAGAGGAGCCTGAAGATGCAACAAAGGGTAGGGATGTGTTCAATGAAAAGCCACCTCCT
GATGAACTTTTGGCTGCATCGGATATAGGAAAAGCTGTCACAACATCTCTTCCTGATAAT
GTGATCCTTCACACCACAATGGGTGATATTCATATGAGACTGTACCCAGAAGAATGCCCA
AAAACTGTGGAGAATTTCACAACGCACTGCCGTAATGGCTATTATGATAATCTCATTTTT
CACCGGGTCATTAAAGGCTTCATGATACAAACGGGAGATCCTTTGGGAGACGGCACTGGT
GGACAGTCTATATGGGGAAGAGAATTTGAAGATGAGTTCCATAAAAGTTTACGACATGAC
AGGCCTTTTACATTGTCAATGGCAAATGCAGGGCCAAACACCAATGGCTCTCAGTTCTTT
ATTACCACAGTGGCTACTCCATGGCTGGACAACAAACACACTGTTTTTGGTAGAGTTGTC
AAGGGAATGGATGTTGTACAGGGCATAGAGAAAGTGAAGACAGACAAGGCCGACAAGCCA
TACCAAGATGTAAAAATCCTAAACGTGACTGTGCCCAAGGCTTAA

Peptide Sequence

PEP ID

VIT_06s0061g01590.t01
PEP Infomation

pep chromosome:12X:6:19509031:19533720:1 gene:VIT_06s0061g01590 transcript:VIT_06s0061g01590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVALTHPLAQLFSKTSKVLEDKQPLIQNLHLHKKKLMLLRQHADFLLFVSIFKGHLKFWK
KTAIGIEFAKHFRSHLNAIEGLAVSVDGLLCCTISNDDSVKVYDVVNYDMMVMIRLPFVP
GAVEWVSKQGDVKARLAISDRNSSFVHVYDARAGSNEPIISREIHLGPIKVMKYNHVFDS
VISADANGIIEYWNPNTLQFPENEVNFRLKSDTNLFEIVKCKTTVSSIEVSPDGKQFSIT
SPDHRIRIFWFKTGKLRRVYDESLEVAQDLQRSDAPLYRLEAIDFGRRMAVEKEIEKTES
APQPNAIFDGSSNFLIYATLLGIKVVNLHTNKVARILGKVENNDRFLRIALYQGDRSSKK
VRKIPAAAANVNESKEPLTDPTLLCCAFKKHRIYLFSRREPEEPEDATKGRDVFNEKPPP
DELLAASDIGKAVTTSLPDNVILHTTMGDIHMRLYPEECPKTVENFTTHCRNGYYDNLIF
HRVIKGFMIQTGDPLGDGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFF
ITTVATPWLDNKHTVFGRVVKGMDVVQGIEKVKTDKADKPYQDVKILNVTVPKA

Transcript Sequence

Transcript ID

VIT_06s0061g01590.t01
Transcript Infomation

cdna chromosome:12X:6:19509031:19533720:1 gene:VIT_06s0061g01590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCTTTAACTCATCCTTTGGCACAGCTGTTCTCTAAGACCTCAAAAGTTCTTGAA
GACAAACAACCCCTCATCCAAAACCTCCATCTACATAAGAAGAAATTAATGCTACTCAGA
CAACATGCTGATTTCTTACTTTTTGTTTCCATTTTTAAAGGACATTTGAAGTTTTGGAAG
AAGACAGCTATTGGCATTGAATTTGCAAAGCATTTTAGATCCCATCTTAATGCCATTGAA
GGGTTAGCTGTTAGTGTTGATGGTTTGCTTTGCTGCACAATTTCCAATGATGACTCTGTG
AAAGTATATGATGTAGTGAACTATGACATGATGGTCATGATTCGCTTACCATTTGTTCCT
GGTGCTGTTGAATGGGTTTCCAAACAAGGCGATGTCAAAGCTAGGCTTGCCATTAGTGAT
CGTAACTCTTCGTTTGTGCATGTGTATGATGCACGAGCTGGTTCAAATGAACCCATCATC
TCGAGAGAGATCCACTTGGGCCCAATAAAAGTTATGAAGTACAATCATGTTTTTGACTCT
GTGATATCTGCAGATGCCAATGGAATCATTGAGTACTGGAACCCTAATACACTTCAGTTC
CCAGAGAATGAGGTGAACTTTAGATTGAAAAGTGATACGAATCTCTTTGAAATTGTGAAA
TGTAAAACAACTGTTTCTTCGATTGAGGTGAGCCCTGATGGTAAACAGTTTTCTATCACA
TCACCTGATCATAGGATCCGTATTTTTTGGTTTAAAACTGGTAAACTAAGACGGGTTTAT
GATGAATCCCTTGAGGTGGCCCAAGATCTTCAGAGAAGTGATGCTCCCTTATACCGGCTG
GAAGCTATTGATTTTGGGAGAAGGATGGCTGTTGAGAAGGAAATTGAGAAAACAGAAAGT
GCACCACAACCAAATGCAATATTTGATGGAAGCTCTAACTTCCTTATATATGCAACACTC
CTTGGAATAAAAGTAGTAAACCTACATACAAATAAAGTTGCTCGAATTCTTGGAAAGGTG
GAGAACAACGATAGATTCCTGAGAATTGCTTTGTATCAAGGTGACCGTAGCAGTAAAAAG
GTTAGAAAAATTCCTGCAGCTGCAGCAAATGTCAATGAGAGCAAAGAACCTTTGACAGAT
CCCACTCTCTTATGCTGCGCTTTCAAGAAACATAGGATCTATTTGTTCAGTCGGAGAGAA
CCAGAGGAGCCTGAAGATGCAACAAAGGGTAGGGATGTGTTCAATGAAAAGCCACCTCCT
GATGAACTTTTGGCTGCATCGGATATAGGAAAAGCTGTCACAACATCTCTTCCTGATAAT
GTGATCCTTCACACCACAATGGGTGATATTCATATGAGACTGTACCCAGAAGAATGCCCA
AAAACTGTGGAGAATTTCACAACGCACTGCCGTAATGGCTATTATGATAATCTCATTTTT
CACCGGGTCATTAAAGGCTTCATGATACAAACGGGAGATCCTTTGGGAGACGGCACTGGT
GGACAGTCTATATGGGGAAGAGAATTTGAAGATGAGTTCCATAAAAGTTTACGACATGAC
AGGCCTTTTACATTGTCAATGGCAAATGCAGGGCCAAACACCAATGGCTCTCAGTTCTTT
ATTACCACAGTGGCTACTCCATGGCTGGACAACAAACACACTGTTTTTGGTAGAGTTGTC
AAGGGAATGGATGTTGTACAGGGCATAGAGAAAGTGAAGACAGACAAGGCCGACAAGCCA
TACCAAGATGTAAAAATCCTAAACGTGACTGTGCCCAAGGCTTAAGATTTGTTCCTGTAC
TAATTTATTTGTTTAGATGTGAGTTTCTTGACTCCATTTGCTACCCTTGGCTGCTAAAAG
ATTGTACACCTGCCGGGTAAGTGTGTACTATATTTTTATGAGATAATAACGCTCCTTGTA
CTTGAGACTATGATAAGAGAT