Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g01230.t01
CDS Infomation

cds chromosome:12X:6:19031074:19036458:1 gene:VIT_06s0061g01230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTGAGATTTCTGCAAAGACGCTCATTCCAGAGACGTTCCAGGGGACGAGGCTGGAC
ATTGCGGGGCAAATTGGATTGGTGTGGGAGCTGGTGAAGGCGCCATTGATAGTTCCTCTG
CTGAGAGTGGCGGTGTATATATGCTTGACCATGTCACTGATGCTGTTCGTGGAGAGGCTA
TACATGGGAATTGTGATCATCCTGGTGAAGATCTTCTGGAAAAAACCAGATAAGCGTTAC
AAATGGGAGCCCCTGCGTGAAGACTTGGAGTCCGGTAACTCGAATTTCCCCCATGTGGTC
GTGCAAATCCCAATGTACAACGAAAAAGAGGTTTACAAGCTCTCCATTGGAGCTGCATGC
GGACTTTCTTGGCCGGCCGATCGTCTCGTGATCCAAGTCCTCGATGATTCAACAGACCCT
GCTATCAAGAACCTGGTGGAGACGGAATGCCAGAGATGGGCAGCCAAAGGCATCAACATA
AGGTACCAAATCAGAGAGAACAGAGTGGGGTACAAAGCAGGAGCTCTGAGAGAAGGCCTG
AAGCGGAGCTACGTCAAGCACTGCGAGTACGTGGCCATTTTCGACGCCGACTTCCAGCCG
GAGCCCGACTATCTGAAGAGAGCCATCCCCTTCCTCGTCTACAACTCGGATATTGCTCTT
GTTCAAGGTCGCTGGAGATTTGTAAATGCGGACGAGTGCTTAATGACAAGGATGCAAGAG
ATGTCATTGGATTATCATTTTACAGTGGAGCAAGAAGTTGGATCAGCTACTCATGCCTTC
TTCGGTTTCAATGGTACAGCTGGTGTGTGGAGAATTGCAGCTATCAACGAGGCTGGTGGG
TGGAAGGACAGAACAACCGTGGAGGACATGGATCTTGCCGTCCGTGCTAGTCTCAAGGGC
TGGAAATTCGTTTATCTTGGTGATCTTCAGGTGAAAAGTGAGCTGCCTAGTACTTTCAAG
GCCTTCCGCTTTCAGCAACACAGGTGGTCCTGTGGTCCAGCCAATTTGTTCAGAAAAATG
GTGATGGAGATTGTAAGAAACAAGAAAGTGAGGTTTTGGAAGAAGGTATATGTGATCTAC
AGCTTCTTCTTAGTGAGGAAGATCGTGGCCCATATGGTCACCTTTTGCCTTTACTGTGTG
GTACTTCCCCTCACCATTTTGATCCCAGAGGTTGAGATTCCTATTTGGGGGATTGTTTAT
ATCCCCTCCATCATCACCACATTGAATGCAGTTGGAACTCCAAGGTCAATTCACCTACTG
TTCTACTGGATTCTTTTTGAGAATGTGATGTCTTTCCACCGGACCAAGGCCACTCTTATC
GGTCTGCTAGAAGCAGGGAGAGCTAATGAATGGGTTGTCACTGAAAAACTAGGCGATACT
CTCAAGAACAAGGCCAACACCAAAGCAGCAGCCAAGAGACCTCGATTCAAGATCGGAGAC
AGAATCAATACCATGGAGCTGGGATTTTCTGCTTTCCTCTTCTTCTGCGCATGCTATGAT
TTTCTGTATGGGAAGTACTACTTCTATGTGTACCTTTTCCTCCAAACCATTACCTACTTC
ATCGTTGGAATTGGGTACGTGGGGACCATTGTCCCTAGCTAG

Peptide Sequence

PEP ID

VIT_06s0061g01230.t01
PEP Infomation

pep chromosome:12X:6:19031074:19036458:1 gene:VIT_06s0061g01230 transcript:VIT_06s0061g01230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEISAKTLIPETFQGTRLDIAGQIGLVWELVKAPLIVPLLRVAVYICLTMSLMLFVERL
YMGIVIILVKIFWKKPDKRYKWEPLREDLESGNSNFPHVVVQIPMYNEKEVYKLSIGAAC
GLSWPADRLVIQVLDDSTDPAIKNLVETECQRWAAKGINIRYQIRENRVGYKAGALREGL
KRSYVKHCEYVAIFDADFQPEPDYLKRAIPFLVYNSDIALVQGRWRFVNADECLMTRMQE
MSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLKG
WKFVYLGDLQVKSELPSTFKAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIY
SFFLVRKIVAHMVTFCLYCVVLPLTILIPEVEIPIWGIVYIPSIITTLNAVGTPRSIHLL
FYWILFENVMSFHRTKATLIGLLEAGRANEWVVTEKLGDTLKNKANTKAAAKRPRFKIGD
RINTMELGFSAFLFFCACYDFLYGKYYFYVYLFLQTITYFIVGIGYVGTIVPS

Transcript Sequence

Transcript ID

VIT_06s0061g01230.t01
Transcript Infomation

cdna chromosome:12X:6:19031074:19036458:1 gene:VIT_06s0061g01230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGAAACAAAATTGCAAAAGATACCAAAATTGGCTATATAACTCCCTCTTCTATCTCTT
TCTCTCTCTGTCCCTCTCTCTCTACTTCTCTGCTCTGCTCTGCTCTGCTTTGCTTTGCTT
TGCTTTCTCACTCCTCTCTCTCTCTCTTCCACAATGCTCCAGTACTCTTCTATCCCTGTT
GTTTTCTTGTGAAGCAAACAAACAGAAGTAGTATTCTTTGGCATCAGTTTGGAGAGAGGA
GGACTTGAAGGAGCAGGGATTTTGATCTTTTCTGTACTTGTTTTCTCCTGGGAGAGAAGA
GAGAGAGATCTGAAGTGGGTATTGTGTTGCTTTGCATGAGTATTGGGGGTCTTGGGTGAG
TGATTTGGAGCACAGCTGGACCACATTGTTGGGTAATTGGGAGGGAAAACCAGAGAGATC
TGATATCATCCCCTGTTTTGCTGTGGTTCTGGGAGAGAGATGGCTGAGATTTCTGCAAAG
ACGCTCATTCCAGAGACGTTCCAGGGGACGAGGCTGGACATTGCGGGGCAAATTGGATTG
GTGTGGGAGCTGGTGAAGGCGCCATTGATAGTTCCTCTGCTGAGAGTGGCGGTGTATATA
TGCTTGACCATGTCACTGATGCTGTTCGTGGAGAGGCTATACATGGGAATTGTGATCATC
CTGGTGAAGATCTTCTGGAAAAAACCAGATAAGCGTTACAAATGGGAGCCCCTGCGTGAA
GACTTGGAGTCCGGTAACTCGAATTTCCCCCATGTGGTCGTGCAAATCCCAATGTACAAC
GAAAAAGAGGTTTACAAGCTCTCCATTGGAGCTGCATGCGGACTTTCTTGGCCGGCCGAT
CGTCTCGTGATCCAAGTCCTCGATGATTCAACAGACCCTGCTATCAAGAACCTGGTGGAG
ACGGAATGCCAGAGATGGGCAGCCAAAGGCATCAACATAAGGTACCAAATCAGAGAGAAC
AGAGTGGGGTACAAAGCAGGAGCTCTGAGAGAAGGCCTGAAGCGGAGCTACGTCAAGCAC
TGCGAGTACGTGGCCATTTTCGACGCCGACTTCCAGCCGGAGCCCGACTATCTGAAGAGA
GCCATCCCCTTCCTCGTCTACAACTCGGATATTGCTCTTGTTCAAGGTCGCTGGAGATTT
GTAAATGCGGACGAGTGCTTAATGACAAGGATGCAAGAGATGTCATTGGATTATCATTTT
ACAGTGGAGCAAGAAGTTGGATCAGCTACTCATGCCTTCTTCGGTTTCAATGGTACAGCT
GGTGTGTGGAGAATTGCAGCTATCAACGAGGCTGGTGGGTGGAAGGACAGAACAACCGTG
GAGGACATGGATCTTGCCGTCCGTGCTAGTCTCAAGGGCTGGAAATTCGTTTATCTTGGT
GATCTTCAGGTGAAAAGTGAGCTGCCTAGTACTTTCAAGGCCTTCCGCTTTCAGCAACAC
AGGTGGTCCTGTGGTCCAGCCAATTTGTTCAGAAAAATGGTGATGGAGATTGTAAGAAAC
AAGAAAGTGAGGTTTTGGAAGAAGGTATATGTGATCTACAGCTTCTTCTTAGTGAGGAAG
ATCGTGGCCCATATGGTCACCTTTTGCCTTTACTGTGTGGTACTTCCCCTCACCATTTTG
ATCCCAGAGGTTGAGATTCCTATTTGGGGGATTGTTTATATCCCCTCCATCATCACCACA
TTGAATGCAGTTGGAACTCCAAGGTCAATTCACCTACTGTTCTACTGGATTCTTTTTGAG
AATGTGATGTCTTTCCACCGGACCAAGGCCACTCTTATCGGTCTGCTAGAAGCAGGGAGA
GCTAATGAATGGGTTGTCACTGAAAAACTAGGCGATACTCTCAAGAACAAGGCCAACACC
AAAGCAGCAGCCAAGAGACCTCGATTCAAGATCGGAGACAGAATCAATACCATGGAGCTG
GGATTTTCTGCTTTCCTCTTCTTCTGCGCATGCTATGATTTTCTGTATGGGAAGTACTAC
TTCTATGTGTACCTTTTCCTCCAAACCATTACCTACTTCATCGTTGGAATTGGGTACGTG
GGGACCATTGTCCCTAGCTAGTGGAGGTGGCATCCCTCAGTCAGACCACCCCACATGGAC
ATGGATTGGCACAAATCCACCTTAGTATTCGTCTTACTGCATCTCTATTTCTCTTCAACA
ATACATATGTGGGCTTCTGCTAGCAACAGTTGATTGCAAATTACTACTATCTTAGCTCTT
AAAAACAAAAATAGGTCATTCATCATGTCGTGCAAAAACCAAAAAAAAAAATGAATAAAA
AATCCCAAAAAAATTCAAGCCATGACTTCCTTGGAACATCTCATGTGATCACTTCGGGAA
AAACCGGGGAGATACAACAACAAATGGTGGTAACATGTGAACACATTATAGAGAGTGAAG
GAGGAAGAAGCAGAAACAACATGTGGGTTTAGAGAACAAAATAGATGCTGTTATTTTCTT
TGAATAGATTGTTTGTAATTGTGAGATTTTGTATTTCTTGCTTGTTTGGCCTTCCATTTG
TTAGTTCCTTTTTTCTTGGTTTTGAAAGGGAATAAGTTGATGGCAGAGAAAGGTTTAACT
TGTAATCAAAGCTTTTATCATTTTATAGTCTCTTATATGTTTCTTTGGCATTAGACTGAA
CTAGATTTCAAGTCATCATATGGTGAAGAACAACA