Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g01140.t01
CDS Infomation

cds chromosome:12X:6:18851759:18854998:1 gene:VIT_06s0061g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTGAAGAATCTCAAGGTATTCATGAGGCTAAATTCACTACTTCACTAGAAGGATTC
CCTGGTGGTCCTGACATTTTCTTGATCGCTGTTAAATTCTGTTATGGTGTCCGGGTGGAG
TTGACACCAAGGAACATAATAATGGTGTATTGTGCGGCAGACTATCTAGGAATGACAGAT
GCATATGGAGAAGAGAACTTACTGTCTAAATCAGAGAGTTTCTTTCATAAAACTATACTT
CGCAACTGGAAGGATTGTATATTGGCCCTTCAAAGTTCTGATCCTGTCATGCCTATGGCT
GAAAAGCTCCACATAATAAGCAAATGTTTGAATGCTCTATCTATGATGGTTTCTACAGAT
CCAAGTTTGTTTGGATGGCCCATGATGATGTATGGCAGCTTGCAAAGCCCAGGAGGAAGC
ATCCTATGGAATGGGATAAACACCGGCGCAAGAATCCGAAGCTCAGAATCTGACTGGTGG
TTTGAAGATATATCATATCTCAATGTGCTTTTGTTTAAGAGACTTATTCAGACAATGGAA
GCAAGAGGTATAAGATCCGAAAACTTAGCAGGTGCTGTAATGTATTACACTAGAAAGTAC
CTACCAGGTCTGGGCCGGTGGCAGAGTGGACAAAGTGGCAAAACTATGACAGTTGCAAGT
TTTAGCTTGACACCTGCAGCCGTTGATCAGAGAGTCCTGTTGGAAAGCATTGAAAAGCTA
CTCCCTGAAAAGAAGGGGAAGTCCTTTTGCCGTTTCCTACTGGGACTTCTTCGAGTTGCA
TTGATACTAGGTGTTAATCAAACATGCAAGGAGTCATTAATGAGGAGAATAGGGATGCAA
CTGGAACTGGCAACTCTAGATAGTCTTCTGATTCCTACTTATTCTGATTCTGATACTTTG
TATAATAATGACTGTGTTGAACAGATTGTCCACCATTTTATATCTTCAGAACCAAGGATA
ACATCATTTTCTCCTGCATCTTTGGACCTGGAGACATCACCATTATCTGGACCATTAAGA
AAAGTTGCGAAGTTGATGGATAGCTATATTGCAGAGGTGGCTTCTGATGTAAACCTGAAG
CCAGGAAAAATACGTTCTCTTGCAGAGGCCCTTCCAGAATCGTCAAGATCTTTGCATGAT
GGGCTGTACAGAGCACTGGATATATATTTCAAGGCACACCCTTGGCTTTCAGAGAAAGAG
AAGGAACAACTCTGTAACATAATCGACTACCAGAAACTCTCTATTGATGCATGTGCCCAT
GCATCCCAAAATGAAAGACTGCCTCTTAGGGTAGTTCTTCAAGTTCTGTTCTTTGAGCAA
ATGCAGTTGAGAACCGCACTGGCTGGTTGTCTTCATGTCATAGACAATGAAAATGCCCCT
GCAGGTCCCATAACCATCTCAAGTGACATGGCAGGCCAGATTGTACAGCGAGATGGATGG
GTGACTGTTGTTCGAGAAAACCAGGTCTTAAAAGTAGACTTGGAAAGAATGAGATCTAGA
GTTGGGGAACTTGAAGAAGAGTTTACTAAAATGAAGCAAGAGATGAAAAAGGTCAGCAAG
ACCCATAGTTCCCTCAATTCTCCTCGCATGGTTGCAAGAAGAATTGGTTGCAAGCTTCTC
CCTCGAGCCTCAGATGCCCAAGCAGATACTGTTGATAGTACAGCACCCACTCCAAGAGCA
TCAGTTGAGCAGGCCCGTTCTTCCTATCATTCCGGGCACCGTAAAACATTCTCTTTATTT
TAA

Peptide Sequence

PEP ID

VIT_06s0061g01140.t01
PEP Infomation

pep chromosome:12X:6:18851759:18854998:1 gene:VIT_06s0061g01140 transcript:VIT_06s0061g01140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFEESQGIHEAKFTTSLEGFPGGPDIFLIAVKFCYGVRVELTPRNIIMVYCAADYLGMTD
AYGEENLLSKSESFFHKTILRNWKDCILALQSSDPVMPMAEKLHIISKCLNALSMMVSTD
PSLFGWPMMMYGSLQSPGGSILWNGINTGARIRSSESDWWFEDISYLNVLLFKRLIQTME
ARGIRSENLAGAVMYYTRKYLPGLGRWQSGQSGKTMTVASFSLTPAAVDQRVLLESIEKL
LPEKKGKSFCRFLLGLLRVALILGVNQTCKESLMRRIGMQLELATLDSLLIPTYSDSDTL
YNNDCVEQIVHHFISSEPRITSFSPASLDLETSPLSGPLRKVAKLMDSYIAEVASDVNLK
PGKIRSLAEALPESSRSLHDGLYRALDIYFKAHPWLSEKEKEQLCNIIDYQKLSIDACAH
ASQNERLPLRVVLQVLFFEQMQLRTALAGCLHVIDNENAPAGPITISSDMAGQIVQRDGW
VTVVRENQVLKVDLERMRSRVGELEEEFTKMKQEMKKVSKTHSSLNSPRMVARRIGCKLL
PRASDAQADTVDSTAPTPRASVEQARSSYHSGHRKTFSLF

Transcript Sequence

Transcript ID

VIT_06s0061g01140.t01
Transcript Infomation

cdna chromosome:12X:6:18851759:18854998:1 gene:VIT_06s0061g01140 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CAGTTTCCTCTCATATCCAAATGTGGGAAGATAGAGAAAATGTTTGAAGAATCTCAAGGT
ATTCATGAGGCTAAATTCACTACTTCACTAGAAGGATTCCCTGGTGGTCCTGACATTTTC
TTGATCGCTGTTAAATTCTGTTATGGTGTCCGGGTGGAGTTGACACCAAGGAACATAATA
ATGGTGTATTGTGCGGCAGACTATCTAGGAATGACAGATGCATATGGAGAAGAGAACTTA
CTGTCTAAATCAGAGAGTTTCTTTCATAAAACTATACTTCGCAACTGGAAGGATTGTATA
TTGGCCCTTCAAAGTTCTGATCCTGTCATGCCTATGGCTGAAAAGCTCCACATAATAAGC
AAATGTTTGAATGCTCTATCTATGATGGTTTCTACAGATCCAAGTTTGTTTGGATGGCCC
ATGATGATGTATGGCAGCTTGCAAAGCCCAGGAGGAAGCATCCTATGGAATGGGATAAAC
ACCGGCGCAAGAATCCGAAGCTCAGAATCTGACTGGTGGTTTGAAGATATATCATATCTC
AATGTGCTTTTGTTTAAGAGACTTATTCAGACAATGGAAGCAAGAGGTATAAGATCCGAA
AACTTAGCAGGTGCTGTAATGTATTACACTAGAAAGTACCTACCAGGTCTGGGCCGGTGG
CAGAGTGGACAAAGTGGCAAAACTATGACAGTTGCAAGTTTTAGCTTGACACCTGCAGCC
GTTGATCAGAGAGTCCTGTTGGAAAGCATTGAAAAGCTACTCCCTGAAAAGAAGGGGAAG
TCCTTTTGCCGTTTCCTACTGGGACTTCTTCGAGTTGCATTGATACTAGGTGTTAATCAA
ACATGCAAGGAGTCATTAATGAGGAGAATAGGGATGCAACTGGAACTGGCAACTCTAGAT
AGTCTTCTGATTCCTACTTATTCTGATTCTGATACTTTGTATAATAATGACTGTGTTGAA
CAGATTGTCCACCATTTTATATCTTCAGAACCAAGGATAACATCATTTTCTCCTGCATCT
TTGGACCTGGAGACATCACCATTATCTGGACCATTAAGAAAAGTTGCGAAGTTGATGGAT
AGCTATATTGCAGAGGTGGCTTCTGATGTAAACCTGAAGCCAGGAAAAATACGTTCTCTT
GCAGAGGCCCTTCCAGAATCGTCAAGATCTTTGCATGATGGGCTGTACAGAGCACTGGAT
ATATATTTCAAGGCACACCCTTGGCTTTCAGAGAAAGAGAAGGAACAACTCTGTAACATA
ATCGACTACCAGAAACTCTCTATTGATGCATGTGCCCATGCATCCCAAAATGAAAGACTG
CCTCTTAGGGTAGTTCTTCAAGTTCTGTTCTTTGAGCAAATGCAGTTGAGAACCGCACTG
GCTGGTTGTCTTCATGTCATAGACAATGAAAATGCCCCTGCAGGTCCCATAACCATCTCA
AGTGACATGGCAGGCCAGATTGTACAGCGAGATGGATGGGTGACTGTTGTTCGAGAAAAC
CAGGTCTTAAAAGTAGACTTGGAAAGAATGAGATCTAGAGTTGGGGAACTTGAAGAAGAG
TTTACTAAAATGAAGCAAGAGATGAAAAAGGTCAGCAAGACCCATAGTTCCCTCAATTCT
CCTCGCATGGTTGCAAGAAGAATTGGTTGCAAGCTTCTCCCTCGAGCCTCAGATGCCCAA
GCAGATACTGTTGATAGTACAGCACCCACTCCAAGAGCATCAGTTGAGCAGGCCCGTTCT
TCCTATCATTCCGGGCACCGTAAAACATTCTCTTTATTTTAAGTGCTAACCCAAACACCT
GAAGTTCATATATCCAATATGAGTAGTATTACTTCAGAAGAGAAGAAAGGCAGGAGGATA
AGTAAACAGAGATCTCATCCAAGATTGTTTTTCATAGAATGTCTACAGAGAGTGAGAGAG
GTTCTTCCCAGATTGATTGAAGTAGTCTTCAGTTATTTTGTATAGAGCATCAATGGAGAA
AATTTTCACCTTCTGAAAGGTTGGGGCCAGCAATCAGTGAAAAATGGCTTACAAAGTTGA
AGTTATACTGAAGCCCATCATAGATCTGGAGTAGCAAGGTGTCTGCTGCCCAAAGTGAGA
GGTGGGAGTTTTCATACACATACATACATCATGTCTCAAAATGGATACATGAAAAATTAT
ATCTGTCATCATTAGTTTTTTGCTTATATCTGTCATCATTAGTTTCTTTTTCTTTTTATT
CTTTCAGGGTCATACATGTAAATCTTTGTAAACCGAGATGTAAGTTTGTTGAAATATTGG
GGAAGATATCAAGCAATTTTTTGAGTTGCCTTCCTAG