Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g01050.t01
CDS Infomation

cds chromosome:12X:6:18703315:18720531:1 gene:VIT_06s0061g01050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGAGGATCGGAACGGTGATCTGAGCGAGGCCAGTGACTATACGTCGGAAGACGAA
GGAACGGAAGATTACAGGCGAGGAGGGTACCATGCGGTTCGGATCGGGGATACCTTCAAG
AATGGGCGCTATGTGGTGCAGGCCAAGCTCGGTTGGGGACATTTCTCAACCGTGTGGCTC
GCTTGGGATACTCAAAAATCCAAATACGTCGCTTTGAAAGTTCAAAAGAGTGCTAAGCAT
TATACTGAGGCAGCCATGGATGAGATAACCATACTGAAACAGATTGCTGAGGGAGACCCA
GATGACAAGAGATGTGTTGTGAAGCTTTTGGATCATTTTAAGCATTCTGGGCCAAATGGG
CAACATGTGTGTATGGTTTTTGAGTACTTGGGGGATAATCTTTTGACCCTTATCAAGTAT
GCTGATTACCGAGGAACTCCCCTACACATGGTTAAAGAAATTTGTTTTCATATTTTAGTA
GGCCTGGATTACTTGCATCACCAGCTTTCAATTATACACACTGATTTGAAACCAGAGAAT
GTATTACTTTTATCCATGATTGATCCATCAAAAGACCCAAGAAAATCGGGTGCTTCTCTT
ATCCTTCCAACTAGCAGGGATAAAATTGTATCTGAGCCTGCAGCTTCAAAAGATACTAAG
AATATGAATGGGGATTTAACAAAGAACCAGAAAAAGAAAATCAGGCGAAAGGCTAAGCGG
GCGGCTCAAGGTTGCATGGGAAAAGAAGCTTCTGACGATCCTGAGCTAGATGCCAAAGCT
CCTGATTCAGAAGATTCAAATAATGATGCAAACTCAAATGGGGATTCTGTTGAGGAGCAA
CAAAATAGTTCTGTGATAAAGAGTAGCTCAGTGAACACTGATGATGTAAAGGATGTCCGA
CGAGAAAATCAGGGTCGTAGGAGAGGGAGCCGTTCCACTAGGCAGAAGCTGTTGGCTGAG
GTTGATCTGAAGTGCAAATTGGTTGACTTTGGGAATGCTTGTTGGACGTATAAACAATTT
ACAAATGATATTCAGACAAGGCAATATAGGTGTCCAGAGGTTATCCTTGGATCTAAATAT
TCAACTTCAGCTGATCTATGGTCCTTTGCTTGCATTTGTTTTGAGCTGGTAACTGGAGAT
GTTCTTTTTGATCCTCACAGTGGTGACAACTATGATAGGGATGAGGATCACTTGGCGCTG
ATGATGGAGCTTCTTGGAATGATGCCGCGCAAGATTGCATTAGGTGGTCGCTATTCCAGG
GACTTCTTCAACAGATATGGGGATTTAAGGCACATCCGTCGGCTGCGATTTTGGCCTCTT
AATAAGGTTCTTACAGAAAAGTATGAATTCAGCGAGCAAGATGCAAATGATATTGCTGAC
TTCCTTGTTCCCATACTTGATTTTGTCCCTGAAAAGAGACCAACTGCGGCTCAGTGCCTT
ACCCATCCATGGATTAATGCTGGCCCTCGACTTCGTGAGCCCTCCATTGCTAGCCTTCCC
AAGGCCACAGATGGTGGTGTTTCTGAGAAGAGGGAGAGGGATGAGAGGGAGGCCATGGAG
GTTGGAGTGGGGAATATAGCTATTGATGGACCTTCGAAGTCAGACAAAGAACCCCAATCT
ATACAAAAACTACAGAAACAGAGCTAG

Peptide Sequence

PEP ID

VIT_06s0061g01050.t01
PEP Infomation

pep chromosome:12X:6:18703315:18720531:1 gene:VIT_06s0061g01050 transcript:VIT_06s0061g01050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAEDRNGDLSEASDYTSEDEGTEDYRRGGYHAVRIGDTFKNGRYVVQAKLGWGHFSTVWL
AWDTQKSKYVALKVQKSAKHYTEAAMDEITILKQIAEGDPDDKRCVVKLLDHFKHSGPNG
QHVCMVFEYLGDNLLTLIKYADYRGTPLHMVKEICFHILVGLDYLHHQLSIIHTDLKPEN
VLLLSMIDPSKDPRKSGASLILPTSRDKIVSEPAASKDTKNMNGDLTKNQKKKIRRKAKR
AAQGCMGKEASDDPELDAKAPDSEDSNNDANSNGDSVEEQQNSSVIKSSSVNTDDVKDVR
RENQGRRRGSRSTRQKLLAEVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKY
STSADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALGGRYSR
DFFNRYGDLRHIRRLRFWPLNKVLTEKYEFSEQDANDIADFLVPILDFVPEKRPTAAQCL
THPWINAGPRLREPSIASLPKATDGGVSEKRERDEREAMEVGVGNIAIDGPSKSDKEPQS
IQKLQKQS

Transcript Sequence

Transcript ID

VIT_06s0061g01050.t01
Transcript Infomation

cdna chromosome:12X:6:18703315:18720531:1 gene:VIT_06s0061g01050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCACTGAAACCCTAATTTTATTCGCTGCAACCAGAGACTCCATATTGACCGTACAATACG
ACGTCGTTTTTTGTTTGGCCACAGGATCGTCAATGGCGGAGGATCGGAACGGTGATCTGA
GCGAGGCCAGTGACTATACGTCGGAAGACGAAGGAACGGAAGATTACAGGCGAGGAGGGT
ACCATGCGGTTCGGATCGGGGATACCTTCAAGAATGGGCGCTATGTGGTGCAGGCCAAGC
TCGGTTGGGGACATTTCTCAACCGTGTGGCTCGCTTGGGATACTCAAAAATCCAAATACG
TCGCTTTGAAAGTTCAAAAGAGTGCTAAGCATTATACTGAGGCAGCCATGGATGAGATAA
CCATACTGAAACAGATTGCTGAGGGAGACCCAGATGACAAGAGATGTGTTGTGAAGCTTT
TGGATCATTTTAAGCATTCTGGGCCAAATGGGCAACATGTGTGTATGGTTTTTGAGTACT
TGGGGGATAATCTTTTGACCCTTATCAAGTATGCTGATTACCGAGGAACTCCCCTACACA
TGGTTAAAGAAATTTGTTTTCATATTTTAGTAGGCCTGGATTACTTGCATCACCAGCTTT
CAATTATACACACTGATTTGAAACCAGAGAATGTATTACTTTTATCCATGATTGATCCAT
CAAAAGACCCAAGAAAATCGGGTGCTTCTCTTATCCTTCCAACTAGCAGGGATAAAATTG
TATCTGAGCCTGCAGCTTCAAAAGATACTAAGAATATGAATGGGGATTTAACAAAGAACC
AGAAAAAGAAAATCAGGCGAAAGGCTAAGCGGGCGGCTCAAGGTTGCATGGGAAAAGAAG
CTTCTGACGATCCTGAGCTAGATGCCAAAGCTCCTGATTCAGAAGATTCAAATAATGATG
CAAACTCAAATGGGGATTCTGTTGAGGAGCAACAAAATAGTTCTGTGATAAAGAGTAGCT
CAGTGAACACTGATGATGTAAAGGATGTCCGACGAGAAAATCAGGGTCGTAGGAGAGGGA
GCCGTTCCACTAGGCAGAAGCTGTTGGCTGAGGTTGATCTGAAGTGCAAATTGGTTGACT
TTGGGAATGCTTGTTGGACGTATAAACAATTTACAAATGATATTCAGACAAGGCAATATA
GGTGTCCAGAGGTTATCCTTGGATCTAAATATTCAACTTCAGCTGATCTATGGTCCTTTG
CTTGCATTTGTTTTGAGCTGGTAACTGGAGATGTTCTTTTTGATCCTCACAGTGGTGACA
ACTATGATAGGGATGAGGATCACTTGGCGCTGATGATGGAGCTTCTTGGAATGATGCCGC
GCAAGATTGCATTAGGTGGTCGCTATTCCAGGGACTTCTTCAACAGATATGGGGATTTAA
GGCACATCCGTCGGCTGCGATTTTGGCCTCTTAATAAGGTTCTTACAGAAAAGTATGAAT
TCAGCGAGCAAGATGCAAATGATATTGCTGACTTCCTTGTTCCCATACTTGATTTTGTCC
CTGAAAAGAGACCAACTGCGGCTCAGTGCCTTACCCATCCATGGATTAATGCTGGCCCTC
GACTTCGTGAGCCCTCCATTGCTAGCCTTCCCAAGGCCACAGATGGTGGTGTTTCTGAGA
AGAGGGAGAGGGATGAGAGGGAGGCCATGGAGGTTGGAGTGGGGAATATAGCTATTGATG
GACCTTCGAAGTCAGACAAAGAACCCCAATCTATACAAAAACTACAGAAACAGAGCTAGA
AGTTTTTAGTAAGGAATGTTTTCTCTCTTGATATCCGATTGGAGACCATGTGAGATGACC
TCGAAGTATTTGGTCTTTAGTGTGGGTGAGAAGGTTAGTGGCTTCATCAGTTACATAAGA
GTACCCTTGTCAGGCATTTTCTAACCTGAAGATGCTTTTGTCAAAGCTTCCCTCCGCGAT
CAACGGATCCAATTCTGTATTTTTTGGCCTTTTGTACAATGTATGATTGATTGTGCTGGG
TGATGATTCCTGTATCAAACCCTTACATCTGCCTTTTTTTTTTATAATACATTTGTTGGA
TGAAAAGTGTATATTTGATTTTGAGTTTT