Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00790.t01
CDS Infomation

cds chromosome:12X:6:18321234:18327332:-1 gene:VIT_06s0061g00790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTTCCTTCTCTACGGTTGTGCTACTACAGCCGCACTCCCTGGCCTCTTTCCCAAT
TCCACCACCTGCTTCCTCTCCTCTCATCCCTCCAAACCAACGAACCCTTCCTTTAGAACA
ACCAGATCACTGACTTTCTCTCCCTTGAGGGTGGCTGCTCCTCCCACCCAGCCTGTGACC
TCAGATCAATCCAATGAAGAACGTGAGGATGAAGTTGTTGCGGTTGATGATGAGAGGTCG
TCGTCGTCTTCCAAGTTCTTGTGGAGAGATCACTGGTATCCAGTGTCGCTAATTGAGGAC
CTGGACACTAATCGCCCGACCCCGTTTCAGCTTCTTGGCCGAGACATCGTTCTCTGGAAG
GATAAATCTACTGCTGAATGGGTTGCCTTTGATGACAAGTGCCCGCACCGCCTCGCCCCA
TTATCTGAGGGAAGAATTGATGAAAATGGTTACTTGCAATGTTCTTACCATGGATGGTCC
TTTGACAAGTGTGGATCTTGCAAACGGATTCCCCAGGCCTTGCCTGAAGGACCTGAAGCT
CGTGCTGTTGGGTCTCCAAGGGCCTGCGCAACAAGGTTTCCTACAATGGTTTCTCAGGGT
CTGCTCTTTGTTTGGCCGGATGAGAACGGTTGGGAAAGAGCTTCTGCAACTAAGCCTCCA
ATGCTGCCTGATGAGTTCGAGAATCCCGAGTTCTCAACTGTGACAATTCAGCGAGATCTG
TTTTATGGCTATGATACGCTGATGGAGAATGTGTCCGATCCTTCCCACATTGATTTTGCA
CATCACAAGGTTACAGGGAGAAGAGATAGAGCCAAGCCTTTGCCATTTAAGTTGGAGTCT
AGTGGCCCTGGGGGATTTGCTGGAGCAAATGATGGGAACCCACGAATCAGTGCCAAATTT
GTTGCACCTTGTTATTATATGAATAAAATAGAGATAGATACAAAGCTTCCCATAGTTGGT
GAGCAGAAGTGGAAGATATGGATTTGTTCCTTCAATGTACCAATGGCACCTGGGAAAACT
CGTTCGATTGTTTGTAGTGCTCGAAACTTTTTCCAGTTCTCTATGCCAGGGCCTGCTTGG
TGGCAGGTGGTTCCTAGATGGCATGAGCACTGGACTTCAAATAAGGTATATGATGGAGAC
ATGATTGTCCTTCAGGGTCAAGAGAAGATATTCCTTTCAAAGTCAAAGGAGGGTTCTGCA
GATGTCAATGAGCAGTACACACAGATCACATTTACACCCACACAATCCGATCGCTTCGTC
TTGGCATTTCGAAATTGGCTGAGGCGGCATGGGAACAGCCAACCTGACTGGTTTGGCATC
TCAAATCAAGGACCTTTGCCATCAACAGTCTTATCAAAACGCCAGATGTTGGATAGATTT
GAGCAGCACACTCTTAACTGTTCATCCTGTAAAGGAGCTTATACAACCTTCCAGACAATG
CAGAAGTTGTTCATTGGTGCCGCTGTTGTTTTCTGTGCAACCACTGGGATTCCTTCAGAG
ATGTGGATTCGGGTCATCTTGGCTGGGCTGGCACTTCTAAGTTCTGCATTGGCTTATGCT
TTGCATGAGCTCCAAAAGAATTTTGTTTTCGTTGATTATGTCCATGCTGAAATCGAATAG

Peptide Sequence

PEP ID

VIT_06s0061g00790.t01
PEP Infomation

pep chromosome:12X:6:18321234:18327332:-1 gene:VIT_06s0061g00790 transcript:VIT_06s0061g00790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAFLLYGCATTAALPGLFPNSTTCFLSSHPSKPTNPSFRTTRSLTFSPLRVAAPPTQPVT
SDQSNEEREDEVVAVDDERSSSSSKFLWRDHWYPVSLIEDLDTNRPTPFQLLGRDIVLWK
DKSTAEWVAFDDKCPHRLAPLSEGRIDENGYLQCSYHGWSFDKCGSCKRIPQALPEGPEA
RAVGSPRACATRFPTMVSQGLLFVWPDENGWERASATKPPMLPDEFENPEFSTVTIQRDL
FYGYDTLMENVSDPSHIDFAHHKVTGRRDRAKPLPFKLESSGPGGFAGANDGNPRISAKF
VAPCYYMNKIEIDTKLPIVGEQKWKIWICSFNVPMAPGKTRSIVCSARNFFQFSMPGPAW
WQVVPRWHEHWTSNKVYDGDMIVLQGQEKIFLSKSKEGSADVNEQYTQITFTPTQSDRFV
LAFRNWLRRHGNSQPDWFGISNQGPLPSTVLSKRQMLDRFEQHTLNCSSCKGAYTTFQTM
QKLFIGAAVVFCATTGIPSEMWIRVILAGLALLSSALAYALHELQKNFVFVDYVHAEIE

Transcript Sequence

Transcript ID

VIT_06s0061g00790.t01
Transcript Infomation

cdna chromosome:12X:6:18321234:18327332:-1 gene:VIT_06s0061g00790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATGCCGGTAAAAATCCCACTCTTTTTACACACGCCGCAACTCAATTGAGTCGACTCGC
TGTTCTGTCTCCTTCTCACTGTAAATAACGGCTCCAGAAGAATTCCAGACTTGTACGCAA
ACGGTTTCTCTAAAAATCTGAAGCCACTCCTCCATCTCACAGAGCTGGAAAATGGCTTTC
CTTCTCTACGGTTGTGCTACTACAGCCGCACTCCCTGGCCTCTTTCCCAATTCCACCACC
TGCTTCCTCTCCTCTCATCCCTCCAAACCAACGAACCCTTCCTTTAGAACAACCAGATCA
CTGACTTTCTCTCCCTTGAGGGTGGCTGCTCCTCCCACCCAGCCTGTGACCTCAGATCAA
TCCAATGAAGAACGTGAGGATGAAGTTGTTGCGGTTGATGATGAGAGGTCGTCGTCGTCT
TCCAAGTTCTTGTGGAGAGATCACTGGTATCCAGTGTCGCTAATTGAGGACCTGGACACT
AATCGCCCGACCCCGTTTCAGCTTCTTGGCCGAGACATCGTTCTCTGGAAGGATAAATCT
ACTGCTGAATGGGTTGCCTTTGATGACAAGTGCCCGCACCGCCTCGCCCCATTATCTGAG
GGAAGAATTGATGAAAATGGTTACTTGCAATGTTCTTACCATGGATGGTCCTTTGACAAG
TGTGGATCTTGCAAACGGATTCCCCAGGCCTTGCCTGAAGGACCTGAAGCTCGTGCTGTT
GGGTCTCCAAGGGCCTGCGCAACAAGGTTTCCTACAATGGTTTCTCAGGGTCTGCTCTTT
GTTTGGCCGGATGAGAACGGTTGGGAAAGAGCTTCTGCAACTAAGCCTCCAATGCTGCCT
GATGAGTTCGAGAATCCCGAGTTCTCAACTGTGACAATTCAGCGAGATCTGTTTTATGGC
TATGATACGCTGATGGAGAATGTGTCCGATCCTTCCCACATTGATTTTGCACATCACAAG
GTTACAGGGAGAAGAGATAGAGCCAAGCCTTTGCCATTTAAGTTGGAGTCTAGTGGCCCT
GGGGGATTTGCTGGAGCAAATGATGGGAACCCACGAATCAGTGCCAAATTTGTTGCACCT
TGTTATTATATGAATAAAATAGAGATAGATACAAAGCTTCCCATAGTTGGTGAGCAGAAG
TGGAAGATATGGATTTGTTCCTTCAATGTACCAATGGCACCTGGGAAAACTCGTTCGATT
GTTTGTAGTGCTCGAAACTTTTTCCAGTTCTCTATGCCAGGGCCTGCTTGGTGGCAGGTG
GTTCCTAGATGGCATGAGCACTGGACTTCAAATAAGGTATATGATGGAGACATGATTGTC
CTTCAGGGTCAAGAGAAGATATTCCTTTCAAAGTCAAAGGAGGGTTCTGCAGATGTCAAT
GAGCAGTACACACAGATCACATTTACACCCACACAATCCGATCGCTTCGTCTTGGCATTT
CGAAATTGGCTGAGGCGGCATGGGAACAGCCAACCTGACTGGTTTGGCATCTCAAATCAA
GGACCTTTGCCATCAACAGTCTTATCAAAACGCCAGATGTTGGATAGATTTGAGCAGCAC
ACTCTTAACTGTTCATCCTGTAAAGGAGCTTATACAACCTTCCAGACAATGCAGAAGTTG
TTCATTGGTGCCGCTGTTGTTTTCTGTGCAACCACTGGGATTCCTTCAGAGATGTGGATT
CGGGTCATCTTGGCTGGGCTGGCACTTCTAAGTTCTGCATTGGCTTATGCTTTGCATGAG
CTCCAAAAGAATTTTGTTTTCGTTGATTATGTCCATGCTGAAATCGAATAGAAACTACTG
TTTGGATCAAACATTTTCCATGCACTTGTATTTCATCCAATGAGAATTGTGTATAGTATT
CATATATGCATGTGAGATAAGAAAGAATTACATGATTTAGATTGTTGTA