Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Vitis vinifera

CDS Sequence

CDS ID	VIT_06s0061g00690.t01
CDS Infomation	cds chromosome:12X:6:18191674:18230600:-1 gene:VIT_06s0061g00690 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:F6GW85]
Sequence	ATGTCCAAAGCCCGAGCCGCGGCCAAGAAGAAGCCCCAATCCCAGTCCGAATCCCAATCC CAATCCTCGTCTCCGAAGAAGCGCAAAACCCAAACTCAAACCCCAGACCTTGCCCCACCT AAAAAATCTACCAATTCCCAAACCCCCGATTCCAAGATCGAACCATTGGATGCGTTGCCG GCGAAGAAACCGAAGAAGGTTGACGTCGAAGAGTGTATTGGGCAATTGAGGAAAAAGGCG GCGGATTTCAATCCCAAAACGGCGGCGTATTGGGAGGACAAGCCAGTTCCATTTCTTTTT CTTGTCAGGGCTTTTGATATGATTTCCAAGGAGACGGGTCGGATTGTGATTACGGATATT GTGTGCAATATGTTGAGGACGGTGATGCACGCCACCCCGGACGATTTAGTAGCGGTTGTC TATCTTTCAGCCAACAGGATTGCGCCGGCGCATGAGGGCTTGGAGCTTGGGATTGGGGAT GCGTCAATTATTAAGGCACTTGCGGAAGCCTGTGGAAGAAAAGAAGAGCAGATTAAGAGC CAGTACAAGGCATTGGGAGATTTGGGGCTTGTTGCAAAAGCATGCCGATCATCCCAGTCT CTGATGCGCAAGCCTGATCCATTAACCGTTGCCAAGGTTTTTAATACATTTGGACTTATT GCCAAGGAATCTGGAAAGGATAGTCAAGAGAAGAAAAAGAACCATATCAAGACACTTCTT GTTGCAGCCACCGACTGCGAGCCACAGTATTTAATTCGTCTACTTCAGACGAAGTTGCGA ATTGGTTTGGCAGAGCAAACTCTGTTAACTGCATTGGGACAAGCTGCTGTATATAATGAC AAAGAGTTGACACAACCACCTCCACATATCCAGTCGCCTCTAGAGGAGGCTGCAAATATT GTTAAGCAATCGTACTCTGTACTTCCTGTTTATGATAAAATAGTCCCTGCTCTTCTTAGC GGTGGTGTATGGAATCTTCCAAAGACATGTAGCTTTATGCCAGGTGTCCCTGTTGGACCT ATGCTAGCAAAACCAACCAAGGGGGTATCTGAAATCATTGATAAATTCCAGGATATGGAA TTCACCTGTGAATACAAATATGATGGAGAACGTGCTCAGATACACTACAAGGAGGATGGG TCAGTTGAGATATATAGTCGCAATGCCGAACGAAATACTGGAAAGTATCCTGATGTTGTT GTTGCAGTTTCAAGATTAAAGAAGTCATCTGTGAGTTCATTTGTTTTGGATTGCGAACTA GTTGCCTATGACCGTCAAAAGGGGAAAATTTTGCCATTCCAGGTCCTCAGCACCCGTGCT CGTAAAAATGTGGTTATGAGTGAAATCAAGGTTGATGTTTGCATATTTGCTTTTGACATT TTGTATCGTAATGGCCAACCACTTCTTCAAGAGCAGCTCAAAATTCGTCGTGAGCATCTT TATGAGTCATTTGAGGAAGAACCTGGATTTTTCCAGTTTGCAACAGCAATAACATCAAAT GATCTTGAGGAAATACAAAAATTCCTTGAAGCTGCTGTTGATACCAGTTGTGAAGGCTTG ATCATTAAAACATTGAATGGAGATGCTACATATGAGCCTTCAAAGCGGTCACATAACTGG CTAAAATTGAAGAAAGATTACATGGAGAATATTGGTGACTCGCTTGATCTAGTACCTATA GCTGCTTTCCACGGTCGCGGGAAACGTGCAGGTGTCTATGGTGCCTTCCTCCTTGCTTGT TATGACAGCAATAAAGAAGAATATCAAAGCATTTGTAAAATAGGCACTGGATTTTCTGAG GCAGTGCTTGAAGAACGCTCAGCCAGTCTTCGTTCTAAAGTGATTTCCAGACCAAAGCCT TACTATCGGTATGCTGATTCAATTGATCCAGATGTATGGTTTGAACCCACTGAGGTTTGG GAGGTGAAAGCTGCAGACTTGACCATTAGCCCTGTTCATCGTGCTGCAGTTGGAATAGTG GATCCTAACAAGGGTATTTCTCTTCGGTTTCCACGTCTGGTTCGCATTCGAGATGATAAG AATCCAGAGCAAGCGTCGTCATCTGACTTGGTTGCTGAGATGTATAATGGCCAAAAGCTC AATCACCAGTCCAATCAAGATGAAAATGAAGAAGACTGA

Peptide Sequence

PEP ID	VIT_06s0061g00690.t01
PEP Infomation	pep chromosome:12X:6:18191674:18230600:-1 gene:VIT_06s0061g00690 transcript:VIT_06s0061g00690.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:F6GW85]
Sequence	MSKARAAAKKKPQSQSESQSQSSSPKKRKTQTQTPDLAPPKKSTNSQTPDSKIEPLDALP AKKPKKVDVEECIGQLRKKAADFNPKTAAYWEDKPVPFLFLVRAFDMISKETGRIVITDI VCNMLRTVMHATPDDLVAVVYLSANRIAPAHEGLELGIGDASIIKALAEACGRKEEQIKS QYKALGDLGLVAKACRSSQSLMRKPDPLTVAKVFNTFGLIAKESGKDSQEKKKNHIKTLL VAATDCEPQYLIRLLQTKLRIGLAEQTLLTALGQAAVYNDKELTQPPPHIQSPLEEAANI VKQSYSVLPVYDKIVPALLSGGVWNLPKTCSFMPGVPVGPMLAKPTKGVSEIIDKFQDME FTCEYKYDGERAQIHYKEDGSVEIYSRNAERNTGKYPDVVVAVSRLKKSSVSSFVLDCEL VAYDRQKGKILPFQVLSTRARKNVVMSEIKVDVCIFAFDILYRNGQPLLQEQLKIRREHL YESFEEEPGFFQFATAITSNDLEEIQKFLEAAVDTSCEGLIIKTLNGDATYEPSKRSHNW LKLKKDYMENIGDSLDLVPIAAFHGRGKRAGVYGAFLLACYDSNKEEYQSICKIGTGFSE AVLEERSASLRSKVISRPKPYYRYADSIDPDVWFEPTEVWEVKAADLTISPVHRAAVGIV DPNKGISLRFPRLVRIRDDKNPEQASSSDLVAEMYNGQKLNHQSNQDENEED

Transcript Sequence

Transcript ID	VIT_06s0061g00690.t01
Transcript Infomation	cdna chromosome:12X:6:18191674:18230600:-1 gene:VIT_06s0061g00690 gene_biotype:protein_coding transcript_biotype:protein_coding description:DNA ligase [Source:UniProtKB/TrEMBL;Acc:F6GW85]
Sequence	ATGTCCAAAGCCCGAGCCGCGGCCAAGAAGAAGCCCCAATCCCAGTCCGAATCCCAATCC CAATCCTCGTCTCCGAAGAAGCGCAAAACCCAAACTCAAACCCCAGACCTTGCCCCACCT AAAAAATCTACCAATTCCCAAACCCCCGATTCCAAGATCGAACCATTGGATGCGTTGCCG GCGAAGAAACCGAAGAAGGTTGACGTCGAAGAGTGTATTGGGCAATTGAGGAAAAAGGCG GCGGATTTCAATCCCAAAACGGCGGCGTATTGGGAGGACAAGCCAGTTCCATTTCTTTTT CTTGTCAGGGCTTTTGATATGATTTCCAAGGAGACGGGTCGGATTGTGATTACGGATATT GTGTGCAATATGTTGAGGACGGTGATGCACGCCACCCCGGACGATTTAGTAGCGGTTGTC TATCTTTCAGCCAACAGGATTGCGCCGGCGCATGAGGGCTTGGAGCTTGGGATTGGGGAT GCGTCAATTATTAAGGCACTTGCGGAAGCCTGTGGAAGAAAAGAAGAGCAGATTAAGAGC CAGTACAAGGCATTGGGAGATTTGGGGCTTGTTGCAAAAGCATGCCGATCATCCCAGTCT CTGATGCGCAAGCCTGATCCATTAACCGTTGCCAAGGTTTTTAATACATTTGGACTTATT GCCAAGGAATCTGGAAAGGATAGTCAAGAGAAGAAAAAGAACCATATCAAGACACTTCTT GTTGCAGCCACCGACTGCGAGCCACAGTATTTAATTCGTCTACTTCAGACGAAGTTGCGA ATTGGTTTGGCAGAGCAAACTCTGTTAACTGCATTGGGACAAGCTGCTGTATATAATGAC AAAGAGTTGACACAACCACCTCCACATATCCAGTCGCCTCTAGAGGAGGCTGCAAATATT GTTAAGCAATCGTACTCTGTACTTCCTGTTTATGATAAAATAGTCCCTGCTCTTCTTAGC GGTGGTGTATGGAATCTTCCAAAGACATGTAGCTTTATGCCAGGTGTCCCTGTTGGACCT ATGCTAGCAAAACCAACCAAGGGGGTATCTGAAATCATTGATAAATTCCAGGATATGGAA TTCACCTGTGAATACAAATATGATGGAGAACGTGCTCAGATACACTACAAGGAGGATGGG TCAGTTGAGATATATAGTCGCAATGCCGAACGAAATACTGGAAAGTATCCTGATGTTGTT GTTGCAGTTTCAAGATTAAAGAAGTCATCTGTGAGTTCATTTGTTTTGGATTGCGAACTA GTTGCCTATGACCGTCAAAAGGGGAAAATTTTGCCATTCCAGGTCCTCAGCACCCGTGCT CGTAAAAATGTGGTTATGAGTGAAATCAAGGTTGATGTTTGCATATTTGCTTTTGACATT TTGTATCGTAATGGCCAACCACTTCTTCAAGAGCAGCTCAAAATTCGTCGTGAGCATCTT TATGAGTCATTTGAGGAAGAACCTGGATTTTTCCAGTTTGCAACAGCAATAACATCAAAT GATCTTGAGGAAATACAAAAATTCCTTGAAGCTGCTGTTGATACCAGTTGTGAAGGCTTG ATCATTAAAACATTGAATGGAGATGCTACATATGAGCCTTCAAAGCGGTCACATAACTGG CTAAAATTGAAGAAAGATTACATGGAGAATATTGGTGACTCGCTTGATCTAGTACCTATA GCTGCTTTCCACGGTCGCGGGAAACGTGCAGGTGTCTATGGTGCCTTCCTCCTTGCTTGT TATGACAGCAATAAAGAAGAATATCAAAGCATTTGTAAAATAGGCACTGGATTTTCTGAG GCAGTGCTTGAAGAACGCTCAGCCAGTCTTCGTTCTAAAGTGATTTCCAGACCAAAGCCT TACTATCGGTATGCTGATTCAATTGATCCAGATGTATGGTTTGAACCCACTGAGGTTTGG GAGGTGAAAGCTGCAGACTTGACCATTAGCCCTGTTCATCGTGCTGCAGTTGGAATAGTG GATCCTAACAAGGGTATTTCTCTTCGGTTTCCACGTCTGGTTCGCATTCGAGATGATAAG AATCCAGAGCAAGCGTCGTCATCTGACTTGGTTGCTGAGATGTATAATGGCCAAAAGCTC AATCACCAGTCCAATCAAGATGAAAATGAAGAAGACTGATGGAACAAATTTACCATGTTT CAATTCTTTCTGAGGTGATTTTTCCTCGTGGAAGTGAAGATCTCTAGTCTCATACCCAGT CAAGCAGATAGTGGGTTGTTTG