Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00610.t01
CDS Infomation

cds chromosome:12X:6:18120004:18130427:1 gene:VIT_06s0061g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATCGACATGGATGGTCCTCTTGATTTCGAGTCTGAAGACCCACTTCTCAGCAGCTCT
ACTCCCAAGAAGAAGAGGAGGAAGGTTATTGGGTTGGATGATCTTCTGACTGATTACTAC
AAGGAGAAAAGCAGACTCGTTGAGAGGGAATCCAAACGGGCAAAGGCCAGCAAATGCTAC
AACTCGGATGAGGATGATGATGTAAGCAAAGAAACTGCATTCTTTGAGACTATTGATGAG
TGCCAACAACAGATGAAAGAAATAAGCAGCGAAGATGAGATTTCCTATTGGGGTATGCAG
GTTTTTGGAAATCAGAAAACTCCACAACCTGTTACTTTCCCTGAGCTTAGAAGTTGTGAG
ATTCTAAATTCTTTTATGAACAATGAGCTCAATTCGTCAGTTGAGCTTTGTGCTGAGAAA
GGTGAAGCTTTTCTTGAAGGATTAATCGTAAATGGTTGGCTCTCTAAATTGGTTTTTATG
TGTGGCCATGTAGAAAAATCAATTGCAATGTGGACCTTTAATTTGATGTTATACTCATCC
AAGGAAGAGTTGAGGACATCTGCATGTGATTTCTGGTGCAGTATTCTCTCAAAGACAGAG
GTTGATCTGCCATTTGCTAAAATTGACTGGTTTCCTAGCTATTCTGATCTAAAAAGAGCT
CTTGAAATATATGGATTTCTGCCCAATTTTTCATCAAATAGAGAATTGTTGAACACTGAT
TCTGATACTGGAGGTCCACCTCAAAATATTAGAGCTTGGATGAAATTTATGGCCATTTGT
TGTCAAGTAAGGAGTAAACATTCTATCTTCTCAACTTCAGAAGCTGAAGAGCTGATTGAA
GTCGTTATCTGTCTCTTCTTAGATCGCCAGCTTCAAGGCCTCTCAATGCTTTTCTATGAA
TGTATGCTATCAGTTATCAGTTTCTTTACAGAGAAAGAATGGCATTATAGCTGTGAGAAA
GTAGCAAAATCTCTTGCTTGCAGAGTTCCACAAGACCTGAACTGCTTGAGAATCGTGGAG
TGCATTTCAGGTGTCAACACTCGCAGCAAGTGCCTCCGAAGTGCAGTTGCATTTCAAATT
CTTGTAAACTGTTTTGATAACAAGGTCACTGATGCAGAAGAGATCCTGAAATTCCTCATC
TCAATTAATGTAAAAGACAGGAGTTGTGATCTTTTTAAGATGTATATATACTTGGTTCTG
ACAGAGAATTGGCTCTATTCTAATCCACTGTTAGAAGACAAACCAGTGATAAATGAAATG
TGGAGCCTTTATCTTCGTAACTGTTCTTGCCAAATCACCAACACAGATTTGAGGACTTAT
GCATCAAAGGTTCGGAATAAAGCTTCATATCTGCTACAAGGCACAGTCAAGGGATGA

Peptide Sequence

PEP ID

VIT_06s0061g00610.t01
PEP Infomation

pep chromosome:12X:6:18120004:18130427:1 gene:VIT_06s0061g00610 transcript:VIT_06s0061g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIDMDGPLDFESEDPLLSSSTPKKKRRKVIGLDDLLTDYYKEKSRLVERESKRAKASKCY
NSDEDDDVSKETAFFETIDECQQQMKEISSEDEISYWGMQVFGNQKTPQPVTFPELRSCE
ILNSFMNNELNSSVELCAEKGEAFLEGLIVNGWLSKLVFMCGHVEKSIAMWTFNLMLYSS
KEELRTSACDFWCSILSKTEVDLPFAKIDWFPSYSDLKRALEIYGFLPNFSSNRELLNTD
SDTGGPPQNIRAWMKFMAICCQVRSKHSIFSTSEAEELIEVVICLFLDRQLQGLSMLFYE
CMLSVISFFTEKEWHYSCEKVAKSLACRVPQDLNCLRIVECISGVNTRSKCLRSAVAFQI
LVNCFDNKVTDAEEILKFLISINVKDRSCDLFKMYIYLVLTENWLYSNPLLEDKPVINEM
WSLYLRNCSCQITNTDLRTYASKVRNKASYLLQGTVKG

Transcript Sequence

Transcript ID

VIT_06s0061g00610.t01
Transcript Infomation

cdna chromosome:12X:6:18120004:18130427:1 gene:VIT_06s0061g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCTGAGGGTTTTAGGTCGCTCGTTGCGCCAGACCGAGAAGGATTGTGTGGGAAGAGATGA
TCGACATGGATGGTCCTCTTGATTTCGAGTCTGAAGACCCACTTCTCAGCAGCTCTACTC
CCAAGAAGAAGAGGAGGAAGGTTATTGGGTTGGATGATCTTCTGACTGATTACTACAAGG
AGAAAAGCAGACTCGTTGAGAGGGAATCCAAACGGGCAAAGGCCAGCAAATGCTACAACT
CGGATGAGGATGATGATGTAAGCAAAGAAACTGCATTCTTTGAGACTATTGATGAGTGCC
AACAACAGATGAAAGAAATAAGCAGCGAAGATGAGATTTCCTATTGGGGTATGCAGGTTT
TTGGAAATCAGAAAACTCCACAACCTGTTACTTTCCCTGAGCTTAGAAGTTGTGAGATTC
TAAATTCTTTTATGAACAATGAGCTCAATTCGTCAGTTGAGCTTTGTGCTGAGAAAGGTG
AAGCTTTTCTTGAAGGATTAATCGTAAATGGTTGGCTCTCTAAATTGGTTTTTATGTGTG
GCCATGTAGAAAAATCAATTGCAATGTGGACCTTTAATTTGATGTTATACTCATCCAAGG
AAGAGTTGAGGACATCTGCATGTGATTTCTGGTGCAGTATTCTCTCAAAGACAGAGGTTG
ATCTGCCATTTGCTAAAATTGACTGGTTTCCTAGCTATTCTGATCTAAAAAGAGCTCTTG
AAATATATGGATTTCTGCCCAATTTTTCATCAAATAGAGAATTGTTGAACACTGATTCTG
ATACTGGAGGTCCACCTCAAAATATTAGAGCTTGGATGAAATTTATGGCCATTTGTTGTC
AAGTAAGGAGTAAACATTCTATCTTCTCAACTTCAGAAGCTGAAGAGCTGATTGAAGTCG
TTATCTGTCTCTTCTTAGATCGCCAGCTTCAAGGCCTCTCAATGCTTTTCTATGAATGTA
TGCTATCAGTTATCAGTTTCTTTACAGAGAAAGAATGGCATTATAGCTGTGAGAAAGTAG
CAAAATCTCTTGCTTGCAGAGTTCCACAAGACCTGAACTGCTTGAGAATCGTGGAGTGCA
TTTCAGGTGTCAACACTCGCAGCAAGTGCCTCCGAAGTGCAGTTGCATTTCAAATTCTTG
TAAACTGTTTTGATAACAAGGTCACTGATGCAGAAGAGATCCTGAAATTCCTCATCTCAA
TTAATGTAAAAGACAGGAGTTGTGATCTTTTTAAGATGTATATATACTTGGTTCTGACAG
AGAATTGGCTCTATTCTAATCCACTGTTAGAAGACAAACCAGTGATAAATGAAATGTGGA
GCCTTTATCTTCGTAACTGTTCTTGCCAAATCACCAACACAGATTTGAGGACTTATGCAT
CAAAGGTTCGGAATAAAGCTTCATATCTGCTACAAGGCACAGTCAAGGGATGATTGCTTC
AATTTGCAGGAATGTCTGGTGATAAATTAATTTCAGTTCATGGGTCAATGCTATTGATGG
ATTGAAATATCCATCCTTTTTTGTATAATCGAGATGCCAAAGCAGCACTTTTTGAAGAAT
ATGGAGGTGAAGACTGACAGGTTGTGGTTGCTGCAAAGCAGGTTGTATTTAAAATAGTGG
CTCGATGTATATTAAATTGTTAAGCTAGATACTGTGCATGTTCCTTCTTTTTGGTGGAAT
GGGTGGGGGGGCATACAGGCTTGAACACCAGAGATGATCTTGGGAGTTGCATCCTGTTAA
TCTGTTAGTGCCTGGCGGTATAATACTCTGCATCTCTACATTTTTTGTGACACCAAAACA
GAGACTTTAGCTAGACTTGTAATGTTTGCATGCCTACAGTGCGGATCATGAAACAGCGCA
AAGCACGGTGTGCTTTTGTGAAATTGTTGGGATGGTTTGAAAATCATTAGCAAAGTGGGT
TCCTAAAATAGTGTGCTAGAAAGTTCATAA