Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00590.t01
CDS Infomation

cds chromosome:12X:6:18099977:18101934:1 gene:VIT_06s0061g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGGGCAGGAGAGAGCAGTACTGGTGGGTGTGGAAGCGGAGAGGTGGGCCGATTT
GCAGTTCATGTGATTAGAGGGCGGTGGTTCTCGGTTTACGCCTCCTTCCTGATCATGGTG
GGAGCCGGAGCAACTTATCTTTTCGGAATCTATTCAAAAGAAATAAAGTCTTCCATGGGG
TACGACCAGTCTACCTTAAATCTCATAGGATTCTTCAAAGATCTGGGTGCAAACGTGGGT
GTCCCGGCAGGGCTTATTGCTGAGGTAACGCCCACATGGTTCGTCCTCTTGGTCGGCTCT
GCACTGAATTTTTCGGGCTTCTTCATGATATGGCTGGCTGTGACGGGCCAAATAGCCAAG
CCAAAGGTTTGGCAGATATGTGCCTACATCTGCGTTGGGGCCAATTCTCAGAACTTTGCA
AATACAGGGGCCCTCGTCACCTCTGTCAAGAACTTCCCGGAGAGCCGGGGGGTCATGTTA
GGCCTCTTGAAGGGCTTTGTGGGGCTCAGTGGTGCCATCATGACTCAAATATACTTTGCT
GTCTATGGCAATGATTCAAAATCTCTCATTCTCCTCATCGGATGGTTCCCTGCGGCGATA
TCGGTAGTGTTTGTGTTCACAATCCGAACCATGAAGGTGGTTCGGCAGCCGAATGAGCTC
AGAGTATTTTACCATTTCCTCTATGTATCGGTTGCACTGGCAGTGTTCCTCATGGTTATG
ACTATTCTTGAGAAACAGTTGGCTTTCCCCCGTGCTGCCTATGCCGGAAGCGTCACCGTC
GTTTGTGCCTTGCTCTTTCTCCCTCTTGTCATCGCCATTAGACAAGAATTTGCCCCCTGG
AACCAGCAGAAACAGCAGGACGATTCTCCCTCTGAGATTACCATCGAGAAGCCACAAGCA
GTGGAATCGAAACTGGTGGCTTTGCCGCCAACCTCATCACCAAATCGAGAGGGCAAATCC
AATTCCCCATCATGTTTCACTACCATTTTCCAGAAACCACCTAGAGGAGAAGACTACACC
ATCTTACAAGCCCTCCTAAGCATTGACATGTCCATCCTGTTCCTTGCAACTCTGTTCGGA
TTGGGGTCAAGTTTAACTGCCATTGACAACTTGGGTCAAATCGGAGAGTCCCTTGGCTAC
CCAACTAAAACCATAAGCTCCTTTGTGTCACTGGTAAGCATATGGAACTTCTTTGGGAGA
GTCTTCGCCGGCTTTCTCTCGGAAGCTCTAGTAGCAAAATGGAAATTCCCTCGGACCCTT
ATGCTAACCTTAGTCCTTCTCCTGCTATGCGTTGGCCACCTCATGATCGCCTTCCCTATC
TCCGGCTCAGTCTACGTAGCATCAGTGATCCTAGGATTCTCATTCGGAGCCCAATTGACT
CTGCTTTTCACCATCATTTCCGAGCTCTTTGGCCTAAAGTACTACTCTACATTGTTCAAT
TGTGGACAACTGGCGTCTCCCCTTGGGACATATGTACTCAATGTGAAGATCACTGGAATG
TTTTACGATAATGAGGCCCTGAAGGAGCTGGCAAAAAAGGGTATGACTAGATTATCTGTG
AATGAACTGACTTGCCTTGGGGTCCGATGTTATAGGAAATCCTTTATAATTTTGGCTGCC
GGCACTTTTTTTGGAGCCCTTGTTTCACTGATTTTGGTGATTAGAACCCGACAATTTTAC
AAAGGGGACATATACAAGAAGTTCAAAGAGGAAACGAAGCCCTCCGAAATCAATATGGCT
TCGGCCTCCACCGTCGATGGGCGATGA

Peptide Sequence

PEP ID

VIT_06s0061g00590.t01
PEP Infomation

pep chromosome:12X:6:18099977:18101934:1 gene:VIT_06s0061g00590 transcript:VIT_06s0061g00590.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGAGESSTGGCGSGEVGRFAVHVIRGRWFSVYASFLIMVGAGATYLFGIYSKEIKSSMG
YDQSTLNLIGFFKDLGANVGVPAGLIAEVTPTWFVLLVGSALNFSGFFMIWLAVTGQIAK
PKVWQICAYICVGANSQNFANTGALVTSVKNFPESRGVMLGLLKGFVGLSGAIMTQIYFA
VYGNDSKSLILLIGWFPAAISVVFVFTIRTMKVVRQPNELRVFYHFLYVSVALAVFLMVM
TILEKQLAFPRAAYAGSVTVVCALLFLPLVIAIRQEFAPWNQQKQQDDSPSEITIEKPQA
VESKLVALPPTSSPNREGKSNSPSCFTTIFQKPPRGEDYTILQALLSIDMSILFLATLFG
LGSSLTAIDNLGQIGESLGYPTKTISSFVSLVSIWNFFGRVFAGFLSEALVAKWKFPRTL
MLTLVLLLLCVGHLMIAFPISGSVYVASVILGFSFGAQLTLLFTIISELFGLKYYSTLFN
CGQLASPLGTYVLNVKITGMFYDNEALKELAKKGMTRLSVNELTCLGVRCYRKSFIILAA
GTFFGALVSLILVIRTRQFYKGDIYKKFKEETKPSEINMASASTVDGR

Transcript Sequence

Transcript ID

VIT_06s0061g00590.t01
Transcript Infomation

cdna chromosome:12X:6:18099977:18101934:1 gene:VIT_06s0061g00590 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGGGCAGGAGAGAGCAGTACTGGTGGGTGTGGAAGCGGAGAGGTGGGCCGATTT
GCAGTTCATGTGATTAGAGGGCGGTGGTTCTCGGTTTACGCCTCCTTCCTGATCATGGTG
GGAGCCGGAGCAACTTATCTTTTCGGAATCTATTCAAAAGAAATAAAGTCTTCCATGGGG
TACGACCAGTCTACCTTAAATCTCATAGGATTCTTCAAAGATCTGGGTGCAAACGTGGGT
GTCCCGGCAGGGCTTATTGCTGAGGTAACGCCCACATGGTTCGTCCTCTTGGTCGGCTCT
GCACTGAATTTTTCGGGCTTCTTCATGATATGGCTGGCTGTGACGGGCCAAATAGCCAAG
CCAAAGGTTTGGCAGATATGTGCCTACATCTGCGTTGGGGCCAATTCTCAGAACTTTGCA
AATACAGGGGCCCTCGTCACCTCTGTCAAGAACTTCCCGGAGAGCCGGGGGGTCATGTTA
GGCCTCTTGAAGGGCTTTGTGGGGCTCAGTGGTGCCATCATGACTCAAATATACTTTGCT
GTCTATGGCAATGATTCAAAATCTCTCATTCTCCTCATCGGATGGTTCCCTGCGGCGATA
TCGGTAGTGTTTGTGTTCACAATCCGAACCATGAAGGTGGTTCGGCAGCCGAATGAGCTC
AGAGTATTTTACCATTTCCTCTATGTATCGGTTGCACTGGCAGTGTTCCTCATGGTTATG
ACTATTCTTGAGAAACAGTTGGCTTTCCCCCGTGCTGCCTATGCCGGAAGCGTCACCGTC
GTTTGTGCCTTGCTCTTTCTCCCTCTTGTCATCGCCATTAGACAAGAATTTGCCCCCTGG
AACCAGCAGAAACAGCAGGACGATTCTCCCTCTGAGATTACCATCGAGAAGCCACAAGCA
GTGGAATCGAAACTGGTGGCTTTGCCGCCAACCTCATCACCAAATCGAGAGGGCAAATCC
AATTCCCCATCATGTTTCACTACCATTTTCCAGAAACCACCTAGAGGAGAAGACTACACC
ATCTTACAAGCCCTCCTAAGCATTGACATGTCCATCCTGTTCCTTGCAACTCTGTTCGGA
TTGGGGTCAAGTTTAACTGCCATTGACAACTTGGGTCAAATCGGAGAGTCCCTTGGCTAC
CCAACTAAAACCATAAGCTCCTTTGTGTCACTGGTAAGCATATGGAACTTCTTTGGGAGA
GTCTTCGCCGGCTTTCTCTCGGAAGCTCTAGTAGCAAAATGGAAATTCCCTCGGACCCTT
ATGCTAACCTTAGTCCTTCTCCTGCTATGCGTTGGCCACCTCATGATCGCCTTCCCTATC
TCCGGCTCAGTCTACGTAGCATCAGTGATCCTAGGATTCTCATTCGGAGCCCAATTGACT
CTGCTTTTCACCATCATTTCCGAGCTCTTTGGCCTAAAGTACTACTCTACATTGTTCAAT
TGTGGACAACTGGCGTCTCCCCTTGGGACATATGTACTCAATGTGAAGATCACTGGAATG
TTTTACGATAATGAGGCCCTGAAGGAGCTGGCAAAAAAGGGTATGACTAGATTATCTGTG
AATGAACTGACTTGCCTTGGGGTCCGATGTTATAGGAAATCCTTTATAATTTTGGCTGCC
GGCACTTTTTTTGGAGCCCTTGTTTCACTGATTTTGGTGATTAGAACCCGACAATTTTAC
AAAGGGGACATATACAAGAAGTTCAAAGAGGAAACGAAGCCCTCCGAAATCAATATGGCT
TCGGCCTCCACCGTCGATGGGCGATGAAACCAGGACAAGTGTTCAGTTGGAAAGTACTTT
TATTATTACTTCAGTTAGTTATTCTCCAAGCACTTTTCTTAGTACTTTTATTATTATTCA
GTTAGTTATTCTACAAGCACTTTTCTTATTTTCAAAAGTTGAAACTATTGTCAATTGTAT
TTTAGAAAATATTAAAGTCCTCAAACTTTACCTTTTA