Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00410.t01
CDS Infomation

cds chromosome:12X:6:17837728:17845007:-1 gene:VIT_06s0061g00410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGTCTGACGCGAGCAAGAAGAAGGCGGCGGCGAAGAAGGCCGCGGCGGCCGCCAAG
AGGGGAGGCAAGTCTGCTGCTGCCGCATCTTCGAAGGCGGCGGCGTCTGCGGCGGCCGCC
GATGTACAGAACGGCGTTGACAAGATGGCCGATATGAAAATATCAGATCGGACTTGTACT
GGTGTGCTCTGTTCGCATCCTCTTTCGCGCGATATTCGGATAGAGTCTTTATCGGTTACT
TTCCATGGTCATGATCTTATAGTGGATACTGAGCTAGAGCTTAACTATGGCAGACGATAT
GGTTTACTTGGACTGAATGGGTGTGGAAAATCTACCCTCCTCACTGCAATTGGGTGCCGA
GAACTTCCCATTCCAGAACACATGGACATCCATCATCTAACCAGAGAGATTGAAGCTTCT
GACATGTCTGCCCTTGAGGCTGTCATAAGCTGTGATGAGGAGAGGTTGAAATTGGAGAAA
GAAGCTGAAGTGTTGGCTGCACAGGATGATGGTGGCGGAGAGGCCCTTGATCGTGTATAT
GAGCGTTTGGAAGCCATGGATGCATCAACTGCAGAAAAGCGCGCTGCTGAAATCTTGTTT
GGTCTTGGTTTTAATAAGACGATGCAAGCAAAGAAAACACAAGATTTCTCTGGTGGTTGG
AGAATGAGGATAGCATTAGCTCGGGCTTTGTTTATGAATCCAACCATTCTGTTACTCGAT
GAACCCACTAATCATCTTGATTTAGAAGCTTGTGTCTGGTTGGAGGAGACATTGAAGAAC
TTTGATCGCATCTTAGTTGTGGTTTCACACTCCCAGGACTTTCTGAATGGTGTCTGCACA
AATATCATCCACATGCAAAACAGGAAACTGAAGCTTTACACTGGTAATTATGACCAATAT
GTTCAAACCCGTGCTGAACTGGAAGAGAACCAGATGAAACAGTACAAGTGGGAGCAGGAC
CAGATTGCTTCAATGAAGGAGTATATTGCCCGATTTGGGCATGGGTCTGCGAAACTAGCT
CGCCAGGCTCAGAGCAAGGAAAAAACTCTGGCCAAAATGGAACGTGGAGGCCTTACAGAA
AAAGTGGTTAGAGACAAGATTCTTGTCTTTCGCTTCACTGATGTGGGAAAGCTTCCCCCG
CCAGTACTGCAGTTTGTAGAAGTCACATTTGGCTATACTCCTGATAATCTCATTTACAAG
AACATTGACTTTGGGGTAGACCTGGACTCAAGGATTGCTCTGGTGGGACCCAATGGGGCT
GGGAAGAGTACTTTGCTGAAGCTCATGACTGGGGATCTGTTTCCTATTGATGGCATGGTC
CGGCGGCACAACCACTTGAGAATTGCTCAGTTCCATCAGCACCTGACTGAGAAACTTGAC
TTGGAGATGTCTGCTCTCCTGTACATGATGAGAGAATACCCAGGAAATGAAGAAGAGAAG
ATGAGGGCAGCAATCGGGAAGTTTGGGCTGACAGGTAAGGCGCAGGTGATGCCAATGAAG
AATCTGTCAGATGGTCAAAGGAGCCGGGTGATTTTTGCATGGTTAGCTTATAGGCAACCT
CACATGTTGCTGCTGGACGAACCAACTAATCATTTGGATATTGAGACAATTGACTCACTA
GCTGAAGCATTGAATGAGTGGGATGGTGGTCTGGTTCTTGTTAGTCATGATTTCAGGCTC
ATAAACCAGGTGGCTCAGGAGATATGGGTGTGTGAGAATCAGAAGGTGACCCGCTGGGAG
GGTGACATTATGGACTTTAAGGAGCATCTGAAGAGCAAGGCTGGATTGTCTGGTTGA

Peptide Sequence

PEP ID

VIT_06s0061g00410.t01
PEP Infomation

pep chromosome:12X:6:17837728:17845007:-1 gene:VIT_06s0061g00410 transcript:VIT_06s0061g00410.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVSDASKKKAAAKKAAAAAKRGGKSAAAASSKAAASAAAADVQNGVDKMADMKISDRTCT
GVLCSHPLSRDIRIESLSVTFHGHDLIVDTELELNYGRRYGLLGLNGCGKSTLLTAIGCR
ELPIPEHMDIHHLTREIEASDMSALEAVISCDEERLKLEKEAEVLAAQDDGGGEALDRVY
ERLEAMDASTAEKRAAEILFGLGFNKTMQAKKTQDFSGGWRMRIALARALFMNPTILLLD
EPTNHLDLEACVWLEETLKNFDRILVVVSHSQDFLNGVCTNIIHMQNRKLKLYTGNYDQY
VQTRAELEENQMKQYKWEQDQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTE
KVVRDKILVFRFTDVGKLPPPVLQFVEVTFGYTPDNLIYKNIDFGVDLDSRIALVGPNGA
GKSTLLKLMTGDLFPIDGMVRRHNHLRIAQFHQHLTEKLDLEMSALLYMMREYPGNEEEK
MRAAIGKFGLTGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHMLLLDEPTNHLDIETIDSL
AEALNEWDGGLVLVSHDFRLINQVAQEIWVCENQKVTRWEGDIMDFKEHLKSKAGLSG

Transcript Sequence

Transcript ID

VIT_06s0061g00410.t01
Transcript Infomation

cdna chromosome:12X:6:17837728:17845007:-1 gene:VIT_06s0061g00410 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCACACGGTCCGCCTCTCCAAAAACCCTAGATCTCACGGTCCTCCTCTCACCTCAGATCA
GTTAGGTTGAAGATGGTGTCTGACGCGAGCAAGAAGAAGGCGGCGGCGAAGAAGGCCGCG
GCGGCCGCCAAGAGGGGAGGCAAGTCTGCTGCTGCCGCATCTTCGAAGGCGGCGGCGTCT
GCGGCGGCCGCCGATGTACAGAACGGCGTTGACAAGATGGCCGATATGAAAATATCAGAT
CGGACTTGTACTGGTGTGCTCTGTTCGCATCCTCTTTCGCGCGATATTCGGATAGAGTCT
TTATCGGTTACTTTCCATGGTCATGATCTTATAGTGGATACTGAGCTAGAGCTTAACTAT
GGCAGACGATATGGTTTACTTGGACTGAATGGGTGTGGAAAATCTACCCTCCTCACTGCA
ATTGGGTGCCGAGAACTTCCCATTCCAGAACACATGGACATCCATCATCTAACCAGAGAG
ATTGAAGCTTCTGACATGTCTGCCCTTGAGGCTGTCATAAGCTGTGATGAGGAGAGGTTG
AAATTGGAGAAAGAAGCTGAAGTGTTGGCTGCACAGGATGATGGTGGCGGAGAGGCCCTT
GATCGTGTATATGAGCGTTTGGAAGCCATGGATGCATCAACTGCAGAAAAGCGCGCTGCT
GAAATCTTGTTTGGTCTTGGTTTTAATAAGACGATGCAAGCAAAGAAAACACAAGATTTC
TCTGGTGGTTGGAGAATGAGGATAGCATTAGCTCGGGCTTTGTTTATGAATCCAACCATT
CTGTTACTCGATGAACCCACTAATCATCTTGATTTAGAAGCTTGTGTCTGGTTGGAGGAG
ACATTGAAGAACTTTGATCGCATCTTAGTTGTGGTTTCACACTCCCAGGACTTTCTGAAT
GGTGTCTGCACAAATATCATCCACATGCAAAACAGGAAACTGAAGCTTTACACTGGTAAT
TATGACCAATATGTTCAAACCCGTGCTGAACTGGAAGAGAACCAGATGAAACAGTACAAG
TGGGAGCAGGACCAGATTGCTTCAATGAAGGAGTATATTGCCCGATTTGGGCATGGGTCT
GCGAAACTAGCTCGCCAGGCTCAGAGCAAGGAAAAAACTCTGGCCAAAATGGAACGTGGA
GGCCTTACAGAAAAAGTGGTTAGAGACAAGATTCTTGTCTTTCGCTTCACTGATGTGGGA
AAGCTTCCCCCGCCAGTACTGCAGTTTGTAGAAGTCACATTTGGCTATACTCCTGATAAT
CTCATTTACAAGAACATTGACTTTGGGGTAGACCTGGACTCAAGGATTGCTCTGGTGGGA
CCCAATGGGGCTGGGAAGAGTACTTTGCTGAAGCTCATGACTGGGGATCTGTTTCCTATT
GATGGCATGGTCCGGCGGCACAACCACTTGAGAATTGCTCAGTTCCATCAGCACCTGACT
GAGAAACTTGACTTGGAGATGTCTGCTCTCCTGTACATGATGAGAGAATACCCAGGAAAT
GAAGAAGAGAAGATGAGGGCAGCAATCGGGAAGTTTGGGCTGACAGGTAAGGCGCAGGTG
ATGCCAATGAAGAATCTGTCAGATGGTCAAAGGAGCCGGGTGATTTTTGCATGGTTAGCT
TATAGGCAACCTCACATGTTGCTGCTGGACGAACCAACTAATCATTTGGATATTGAGACA
ATTGACTCACTAGCTGAAGCATTGAATGAGTGGGATGGTGGTCTGGTTCTTGTTAGTCAT
GATTTCAGGCTCATAAACCAGGTGGCTCAGGAGATATGGGTGTGTGAGAATCAGAAGGTG
ACCCGCTGGGAGGGTGACATTATGGACTTTAAGGAGCATCTGAAGAGCAAGGCTGGATTG
TCTGGTTGAACCAGATAGCAGAGGCTGTGTCAGCATTATACCATTGTACTAGTCTATCTT
TGCTTACATTGATCATCTATATCACTACACGACTGGTAAATGATGCATCTAGTGGACATG
TGATCTCCCAGAGGATTATGATGAAAGCAAGGAAAGTGGCAAACACAAGTGATCAAGGCA
AGGGGTTATTGTTTCAAGCTGATGTGTTTTGATACCTGTCTGGTTATTATTTACTAGGAG
GTGATATATAATTTTTTTTCCTTTACAAATATACACTGCCCTTATATTATTCTTGGTTAT
CGGCTCAGAACCAGGAAATACCTTTTTAACAATGTTTCTTCTGGTAGACGAGATGCCTAT
GTGAACCTCCTTATGATTGTGCTTCATTCCCTTTGAATGATGTGTTGTAGGCCATTATGA
TGTTATCCTATTTTTTTTTCTCAAGT