Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00380.t01
CDS Infomation

cds chromosome:12X:6:17784600:17800453:1 gene:VIT_06s0061g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTCAGTCGTTGTGCAACGGCGAGAGAGCCGTGGTCCTCCTCTTCATCTCCGCC
ATCCTCTTCTCCACTCCCTCCTCGCTTTTCTCCCAAGCCCTGGTTCTCTTCCTTCTTGCC
ATCGCCGCCCTCTTCCTCGACATTCGCCTCGACAATTCCAATTTCTCTGTCCCCTTCAAG
ACCAGGCCAGGTGCTTCGTCAGGGATATTTCTGGGGGCAGTTACACTGCCTGCTGTTATG
ATCTCAAGGTTGATTCAGCTATCAAGAGCATTCTCGTTGCATGAAGTTGGAATTAAAGAG
CTTGGATATTTGAAAGTGCAATATTGGGCCACTTCTGCCAGCTGCTTCGGTGTGCTTATT
TTCATTTTCTTACTCATGCGGCGTTCTCCCAACAATAGCTGCTCCTTTTCTTCGAACAGT
CCTCAGGGTTTGAAGTTTAGCTCAAGTTGCGTGGTTTCATGTGCAGTGTTGTGCTGTGTG
TCTTTTGCTATAGTATCATATTATGGATTGCACACAGTACTACTGTTACTGTGGGTGCTC
TTTCATGGAGTGGCAGCTGTGAAATTAATTCAGCATGTTCATAATACTTTTCCATCATGT
GCTTCCATTGGAGAAGCACTTCTGGTGACTTCTGGTCTGGTTCTCTATTTTGGCGACATG
CTAGGATGTACCATTGCAAAGATTGATGGATACTGGATACCATTAGACTTACAGTATGGA
GCTAAAAGAAGTGAGATTAGTACCATCATTCAGGGAGTGGTGCTTGGCCTTCTTCTTTTT
CCAATATTCTTTAAATTTCTTCTTCAAATTTGGGAACACATTGCAAGTTCTGGTCACTCT
GAAGCAAGGGCGTGCAATGAGATTGGGAAATCTCTTATTTTCCATACTTCCCTTGCATTT
ATCTTGATTGTGATCATCCCATTATGGATGCAGTTTGTTCTGGATTTTCATATGCATCCG
CTGTTATGGATATTCAAATTTGTTTTCTCGGAACCACTTAAAAGACTATCATTGTGTATT
TATTGGGTGGGCGTTATATATGCATCAATTCTGCGGTTTTACAACATCTCAAAGAATAGT
AAAGTGGAGCGGATTCTTCTTCGCAAATACTATCATCTGATGGCTGTTTCGATGTTTCTG
CCTGCTGTTATCTTCCAGCCAAAGTTTCTTGATCTAGCCTTCGGTGCAGCTTTGGCAGCT
TTCTTGACATTAGAAATTATTCGAGTATGGAGAATTTGGCCCTTGGGACAACTTGTGCAC
CAGTTTATGAATGCTTTCACAGATCACCGTGATTCCAATCTTCTTGTTGTCAGCCATTTT
TCACTTTTATTGGGATGTGCACTTCCTATCTGGATGTCTTCTGGTTACAATGATCGACCT
CTTGCCCCCTTTGCTGGAATTTTGAGCCTTGGCATTGGAGATACAATGGCATCAATGGTT
GGTCACAAGTATGGTGTCCTCAGGTGGAGCAAAACTGGCAAGAAAACCATTGAAGGTACT
GCAGCTGGTATAACATCTGTCCTTGTAGCTTGCTCAATCCTTCTTCCACTTCTGGCTTCA
ACTGGATACATACTTACCCAGCACTGGGTCTCTCTTCTCTTAGCTGTGACCGCAAGTGGT
TTGCTGGAGGCCTACACAGCACAGCTTGATAATGCTTTCATACCTCTTATTTTCTACAGC
CTTCTCTGTTTGTAA

Peptide Sequence

PEP ID

VIT_06s0061g00380.t01
PEP Infomation

pep chromosome:12X:6:17784600:17800453:1 gene:VIT_06s0061g00380 transcript:VIT_06s0061g00380.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASQSLCNGERAVVLLFISAILFSTPSSLFSQALVLFLLAIAALFLDIRLDNSNFSVPFK
TRPGASSGIFLGAVTLPAVMISRLIQLSRAFSLHEVGIKELGYLKVQYWATSASCFGVLI
FIFLLMRRSPNNSCSFSSNSPQGLKFSSSCVVSCAVLCCVSFAIVSYYGLHTVLLLLWVL
FHGVAAVKLIQHVHNTFPSCASIGEALLVTSGLVLYFGDMLGCTIAKIDGYWIPLDLQYG
AKRSEISTIIQGVVLGLLLFPIFFKFLLQIWEHIASSGHSEARACNEIGKSLIFHTSLAF
ILIVIIPLWMQFVLDFHMHPLLWIFKFVFSEPLKRLSLCIYWVGVIYASILRFYNISKNS
KVERILLRKYYHLMAVSMFLPAVIFQPKFLDLAFGAALAAFLTLEIIRVWRIWPLGQLVH
QFMNAFTDHRDSNLLVVSHFSLLLGCALPIWMSSGYNDRPLAPFAGILSLGIGDTMASMV
GHKYGVLRWSKTGKKTIEGTAAGITSVLVACSILLPLLASTGYILTQHWVSLLLAVTASG
LLEAYTAQLDNAFIPLIFYSLLCL

Transcript Sequence

Transcript ID

VIT_06s0061g00380.t01
Transcript Infomation

cdna chromosome:12X:6:17784600:17800453:1 gene:VIT_06s0061g00380 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGATCGGCCGTCACCCAACCATTGATTCCATCCCCCTCGAGGCGCGCCAAAACTCTCTCT
TTCCCTCTCCCTTATCTCTGAATCGCTGTGTCTGCAAGACGCCATTAGAACGGTGTTGGC
CATGGCTTCTCAGTCGTTGTGCAACGGCGAGAGAGCCGTGGTCCTCCTCTTCATCTCCGC
CATCCTCTTCTCCACTCCCTCCTCGCTTTTCTCCCAAGCCCTGGTTCTCTTCCTTCTTGC
CATCGCCGCCCTCTTCCTCGACATTCGCCTCGACAATTCCAATTTCTCTGTCCCCTTCAA
GACCAGGCCAGGTGCTTCGTCAGGGATATTTCTGGGGGCAGTTACACTGCCTGCTGTTAT
GATCTCAAGGTTGATTCAGCTATCAAGAGCATTCTCGTTGCATGAAGTTGGAATTAAAGA
GCTTGGATATTTGAAAGTGCAATATTGGGCCACTTCTGCCAGCTGCTTCGGTGTGCTTAT
TTTCATTTTCTTACTCATGCGGCGTTCTCCCAACAATAGCTGCTCCTTTTCTTCGAACAG
TCCTCAGGGTTTGAAGTTTAGCTCAAGTTGCGTGGTTTCATGTGCAGTGTTGTGCTGTGT
GTCTTTTGCTATAGTATCATATTATGGATTGCACACAGTACTACTGTTACTGTGGGTGCT
CTTTCATGGAGTGGCAGCTGTGAAATTAATTCAGCATGTTCATAATACTTTTCCATCATG
TGCTTCCATTGGAGAAGCACTTCTGGTGACTTCTGGTCTGGTTCTCTATTTTGGCGACAT
GCTAGGATGTACCATTGCAAAGATTGATGGATACTGGATACCATTAGACTTACAGTATGG
AGCTAAAAGAAGTGAGATTAGTACCATCATTCAGGGAGTGGTGCTTGGCCTTCTTCTTTT
TCCAATATTCTTTAAATTTCTTCTTCAAATTTGGGAACACATTGCAAGTTCTGGTCACTC
TGAAGCAAGGGCGTGCAATGAGATTGGGAAATCTCTTATTTTCCATACTTCCCTTGCATT
TATCTTGATTGTGATCATCCCATTATGGATGCAGTTTGTTCTGGATTTTCATATGCATCC
GCTGTTATGGATATTCAAATTTGTTTTCTCGGAACCACTTAAAAGACTATCATTGTGTAT
TTATTGGGTGGGCGTTATATATGCATCAATTCTGCGGTTTTACAACATCTCAAAGAATAG
TAAAGTGGAGCGGATTCTTCTTCGCAAATACTATCATCTGATGGCTGTTTCGATGTTTCT
GCCTGCTGTTATCTTCCAGCCAAAGTTTCTTGATCTAGCCTTCGGTGCAGCTTTGGCAGC
TTTCTTGACATTAGAAATTATTCGAGTATGGAGAATTTGGCCCTTGGGACAACTTGTGCA
CCAGTTTATGAATGCTTTCACAGATCACCGTGATTCCAATCTTCTTGTTGTCAGCCATTT
TTCACTTTTATTGGGATGTGCACTTCCTATCTGGATGTCTTCTGGTTACAATGATCGACC
TCTTGCCCCCTTTGCTGGAATTTTGAGCCTTGGCATTGGAGATACAATGGCATCAATGGT
TGGTCACAAGTATGGTGTCCTCAGGTGGAGCAAAACTGGCAAGAAAACCATTGAAGGTAC
TGCAGCTGGTATAACATCTGTCCTTGTAGCTTGCTCAATCCTTCTTCCACTTCTGGCTTC
AACTGGATACATACTTACCCAGCACTGGGTCTCTCTTCTCTTAGCTGTGACCGCAAGTGG
TTTGCTGGAGGCCTACACAGCACAGCTTGATAATGCTTTCATACCTCTTATTTTCTACAG
CCTTCTCTGTTTGTAAATGCGGCTCCAGCCTCCCAAAAATAAATGACTGTTGGAGGGCAG
TACCAAATCATCCTAGATTTTCCATGATTCTTAATTTTGTGCTTCACTTGAGCACTTGCT
TTTAGATACAACCAACCTATTATTAGAGACTATAACTCACCTGCTGTATGGTAAGCTCAT
TGTCGGCAGGCATTCTTTTCGGATTGGGACTGAGTCTTAATATTTTAAATGTAGGTACGT
TCGGCACACATGTAAATGGATCTGCACTGGTAGGCTTACATGTTTAGAGATCTTAGGATA
GAATCACATTTGTAGCGAGAACAAACTTT