Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00350.t01
CDS Infomation

cds chromosome:12X:6:17746022:17756053:1 gene:VIT_06s0061g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGAAATACAGTCTCAATCAGATAATTATAGGTCATCATCTTCTTCGGCCAGCAGT
CCTGCAAGCAGAGTGCCCTCTAGTAATTTTTTCTACTTGCGAAAACCTGGTTCACTCAGA
CAACCCATATCATTTGAGGACTCACCGGAATGGGAGGACACAGATATTGATGTCAGGGTG
GAGGAAGGGGGTGACTCTATTCATATTGCAACACCGGCCTCCCCATCTCTCTCAAAGCTC
AATAGTGGGTCATTGCCGTCCCCACCCTTACCAGAGAGTGCGATTTTTGCAAGGAAAATT
GCGGGGGCTTCAATTGTGTGGAAGGACTTGACTGTTACAATAAAGGGGAAGAGGAAGTAC
TCTGATAAGGTTGTAAAGAGTTCAAATGGTTATACATTGCCCGGGACTATGACAGTAATC
ATGGGTCCTGCCAAATCAGGGAAATCCACATTATTGAGGGCTCTTGCAGGACGCTTGCAT
AACTCAGCCAAAATGTATGGTGAGGTGTTTGTTAATGGGACAAAACGGCACTTGCCATAT
GGGTCCTATGGATTTGTTGAGAGAGAAACCACACTGATTGGATCACTCACTGTCCGAGAG
TTTCTGTATTACTCAGCACTGCTTCAGCTTCCTGGTTTCTTCTGTCAGAAGAAGAGTGTG
GTAGAGGATTCCATCCATGCGATGTCTTTGGGTGATTATGCAAACAAACTGATAGGTGGC
CATTGTTATATGAAGGGCCTTCCTAGTGGTGAGAGAAGGCGTGTGAGCATTGCCAGGGAG
CTTGTGATGAGGCCTCATATCTTATTCATAGATGAGCCTCTTTATCATCTTGATAGTGTC
TCAGCGCTTTTGATGATGGTTACATTGAAGAAGCTTGCAAGCACAGGCTGCACTCTGATT
TTTACCATTTATCAAAGTAGCACAGAAGTATTTGGCCTTTTTGACCGGATTTGTCTGCTT
TCAAATGGGAATACCCTTTTTTTTGGAGAAACATTAGCCTGTTTGCAGCACTTCTCCAAT
GCTGGATTTCCTTGCCCAATTATGCAAAGCCCTTCAGATCACTTTCTACGTGCAATAAAT
ACGGATTTTGACAGGATCATTGCAATGTGCAAAAATTGGCAGGATGACCATGGGGATTTT
TCATCAGTGAATATGGACACAGCTGTTGCAATACGTACTCTTGAAGCAACTTACAAATCA
TCAGTGGATGCTGCAGCAGTTGAAAGTATGATTATCAAACTCACTGACAAGGAAGGGCCA
CTTCTCAAAAGCAAGGGGAAGGCTAGCAGTGCTACGCGAATTGCAGTTTTAACATGGAGA
TCATTATTAATCATGTCAAGGGAGTGGAAATACTTCTGGCTTCGGCTTGTTCTTTGCATG
CTTTTTACACTTTGTGTTGGTACAGTATTTTCCGGCTTGGGGCATTCTCTGTCATCTGTT
GTGACTAGGGTTGCAGCCATATTTGTATTTGTATCATTTACTTCACTTCTAAGCATTGCT
GGCGTACCTGCACATTTGAAAGAAATCAAGATATATGCCTGTGAAGAATCAAACCAGCAT
TCAGGAGCATTGGTTTTTCTGCTTGGACAGCTCCTCGCCAGCATTCCATTCCTGTTTCTC
ATCTCCGTTTCTTCAAGTCTTATCTTCTATTTTCTTATTGGGCTTCGTGATGAATTCAGC
TTGTTGATGTACTTTGTGCTGAATTTCTTCACATGCCTGTTAGTGAATGAAGGGCTAACG
CTGGTTGTTGCTTCTATTTGGCAAGACGCTTTCTGGAGCATCTTGACACTGGTTTGCATA
CATGTGTTAATGATGCTTTCAGCAGGCTACTTCAGACTTCGGAGTGCACTGCCTGGACCT
GTTTGGACTTATCCGTTATCCTATATTGCTTTCCACACCTATGCAATTCAGGGGCTCTTG
GAGAATGAGTACATTGGAACATCATTTGCAGTGGGGCAGGTAAGGAGCATATCTGGGTAT
CAGGCTCTCCGTAGTGCATACGACATCTCTCCCAACAGTAATTCCAAATGGGGGAATTTA
CTGGTCTTGTTTCTTATGGCGGTTGGGTATCGTATTCTTGTGTTTGTGTTGCTGCGTTTT
CGTGTAAGAAAAAATGTATCCGCATGTCGATTTTTCCAGTGTAATCAGAACACCAACGAT
GCAAGATGA

Peptide Sequence

PEP ID

VIT_06s0061g00350.t01
PEP Infomation

pep chromosome:12X:6:17746022:17756053:1 gene:VIT_06s0061g00350 transcript:VIT_06s0061g00350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEIQSQSDNYRSSSSSASSPASRVPSSNFFYLRKPGSLRQPISFEDSPEWEDTDIDVRV
EEGGDSIHIATPASPSLSKLNSGSLPSPPLPESAIFARKIAGASIVWKDLTVTIKGKRKY
SDKVVKSSNGYTLPGTMTVIMGPAKSGKSTLLRALAGRLHNSAKMYGEVFVNGTKRHLPY
GSYGFVERETTLIGSLTVREFLYYSALLQLPGFFCQKKSVVEDSIHAMSLGDYANKLIGG
HCYMKGLPSGERRRVSIARELVMRPHILFIDEPLYHLDSVSALLMMVTLKKLASTGCTLI
FTIYQSSTEVFGLFDRICLLSNGNTLFFGETLACLQHFSNAGFPCPIMQSPSDHFLRAIN
TDFDRIIAMCKNWQDDHGDFSSVNMDTAVAIRTLEATYKSSVDAAAVESMIIKLTDKEGP
LLKSKGKASSATRIAVLTWRSLLIMSREWKYFWLRLVLCMLFTLCVGTVFSGLGHSLSSV
VTRVAAIFVFVSFTSLLSIAGVPAHLKEIKIYACEESNQHSGALVFLLGQLLASIPFLFL
ISVSSSLIFYFLIGLRDEFSLLMYFVLNFFTCLLVNEGLTLVVASIWQDAFWSILTLVCI
HVLMMLSAGYFRLRSALPGPVWTYPLSYIAFHTYAIQGLLENEYIGTSFAVGQVRSISGY
QALRSAYDISPNSNSKWGNLLVLFLMAVGYRILVFVLLRFRVRKNVSACRFFQCNQNTND
AR

Transcript Sequence

Transcript ID

VIT_06s0061g00350.t01
Transcript Infomation

cdna chromosome:12X:6:17746022:17756053:1 gene:VIT_06s0061g00350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAGTGTATTTGAGCTTCTGAGATTTTCTTATTTTTGCTGAGAACAAGCAGAAAAGGGAG
TATATTGGTATTTGATTAATGGGTTCTGGTGGTATTATATCTTTTATTTGACCTGGGTTC
TGTGTGAAATGCAGAGTTACGGCTTCCTTTGATGTAATTTATTGGGGTTTTAGTGTATGT
TTGGTCACGATCCCTGCCTGATAGGCTTTGTAACAAGGGTTGTGATCCGGTCTGGGCTGC
CTTATTTTTGGTTGTGGCCTGTAGGATGGTGTTCTATACAATTTGATAATTGAAAATTTT
GAGACAATTTAAATGGAAGAAATACAGTCTCAATCAGATAATTATAGGTCATCATCTTCT
TCGGCCAGCAGTCCTGCAAGCAGAGTGCCCTCTAGTAATTTTTTCTACTTGCGAAAACCT
GGTTCACTCAGACAACCCATATCATTTGAGGACTCACCGGAATGGGAGGACACAGATATT
GATGTCAGGGTGGAGGAAGGGGGTGACTCTATTCATATTGCAACACCGGCCTCCCCATCT
CTCTCAAAGCTCAATAGTGGGTCATTGCCGTCCCCACCCTTACCAGAGAGTGCGATTTTT
GCAAGGAAAATTGCGGGGGCTTCAATTGTGTGGAAGGACTTGACTGTTACAATAAAGGGG
AAGAGGAAGTACTCTGATAAGGTTGTAAAGAGTTCAAATGGTTATACATTGCCCGGGACT
ATGACAGTAATCATGGGTCCTGCCAAATCAGGGAAATCCACATTATTGAGGGCTCTTGCA
GGACGCTTGCATAACTCAGCCAAAATGTATGGTGAGGTGTTTGTTAATGGGACAAAACGG
CACTTGCCATATGGGTCCTATGGATTTGTTGAGAGAGAAACCACACTGATTGGATCACTC
ACTGTCCGAGAGTTTCTGTATTACTCAGCACTGCTTCAGCTTCCTGGTTTCTTCTGTCAG
AAGAAGAGTGTGGTAGAGGATTCCATCCATGCGATGTCTTTGGGTGATTATGCAAACAAA
CTGATAGGTGGCCATTGTTATATGAAGGGCCTTCCTAGTGGTGAGAGAAGGCGTGTGAGC
ATTGCCAGGGAGCTTGTGATGAGGCCTCATATCTTATTCATAGATGAGCCTCTTTATCAT
CTTGATAGTGTCTCAGCGCTTTTGATGATGGTTACATTGAAGAAGCTTGCAAGCACAGGC
TGCACTCTGATTTTTACCATTTATCAAAGTAGCACAGAAGTATTTGGCCTTTTTGACCGG
ATTTGTCTGCTTTCAAATGGGAATACCCTTTTTTTTGGAGAAACATTAGCCTGTTTGCAG
CACTTCTCCAATGCTGGATTTCCTTGCCCAATTATGCAAAGCCCTTCAGATCACTTTCTA
CGTGCAATAAATACGGATTTTGACAGGATCATTGCAATGTGCAAAAATTGGCAGGATGAC
CATGGGGATTTTTCATCAGTGAATATGGACACAGCTGTTGCAATACGTACTCTTGAAGCA
ACTTACAAATCATCAGTGGATGCTGCAGCAGTTGAAAGTATGATTATCAAACTCACTGAC
AAGGAAGGGCCACTTCTCAAAAGCAAGGGGAAGGCTAGCAGTGCTACGCGAATTGCAGTT
TTAACATGGAGATCATTATTAATCATGTCAAGGGAGTGGAAATACTTCTGGCTTCGGCTT
GTTCTTTGCATGCTTTTTACACTTTGTGTTGGTACAGTATTTTCCGGCTTGGGGCATTCT
CTGTCATCTGTTGTGACTAGGGTTGCAGCCATATTTGTATTTGTATCATTTACTTCACTT
CTAAGCATTGCTGGCGTACCTGCACATTTGAAAGAAATCAAGATATATGCCTGTGAAGAA
TCAAACCAGCATTCAGGAGCATTGGTTTTTCTGCTTGGACAGCTCCTCGCCAGCATTCCA
TTCCTGTTTCTCATCTCCGTTTCTTCAAGTCTTATCTTCTATTTTCTTATTGGGCTTCGT
GATGAATTCAGCTTGTTGATGTACTTTGTGCTGAATTTCTTCACATGCCTGTTAGTGAAT
GAAGGGCTAACGCTGGTTGTTGCTTCTATTTGGCAAGACGCTTTCTGGAGCATCTTGACA
CTGGTTTGCATACATGTGTTAATGATGCTTTCAGCAGGCTACTTCAGACTTCGGAGTGCA
CTGCCTGGACCTGTTTGGACTTATCCGTTATCCTATATTGCTTTCCACACCTATGCAATT
CAGGGGCTCTTGGAGAATGAGTACATTGGAACATCATTTGCAGTGGGGCAGGTAAGGAGC
ATATCTGGGTATCAGGCTCTCCGTAGTGCATACGACATCTCTCCCAACAGTAATTCCAAA
TGGGGGAATTTACTGGTCTTGTTTCTTATGGCGGTTGGGTATCGTATTCTTGTGTTTGTG
TTGCTGCGTTTTCGTGTAAGAAAAAATGTATCCGCATGTCGATTTTTCCAGTGTAATCAG
AACACCAACGATGCAAGATGAATGGATAAAGTACTATCAGTTTTGTTTGGCTTTTC