Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00230.t01
CDS Infomation

cds chromosome:12X:6:17493185:17498593:1 gene:VIT_06s0061g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTCCTTCTGGCTCTGGGAAATCCACTCTTCTTGACTCTCTAGCAGGTAGACTCTCA
AGAAATGTGATAATGACTGGAAATGTTCTTCTTAATGGGAGGAAGAGGAGGCTAGACTGT
GGATTTGTTGCTTATGTGACCCAAGAAGATGTACTGCTGGGAACGCTCACAGTTAGGGAA
ACCATAACATACTCAGCACATTTGAGGCTTCCAACTAGCATGACCAAAGAAGAGATTAAT
GGGATTGTAGATGGAACAATCATGGAAATGGGTCTACAAGATTGCTCTGATAGACTGATT
GGGAACTGGCATTTAAGAGGTATAAGTGGTGGAGAGAAGAAGAGATTGAGCATTGCCCTT
GAAATTCTTACGCGTCCCCGTCTTTTGTTTCTTGATGAACCTACAAGTGGCCTAGACAGT
GCCTCAGCTTTCTTCGTTATACAAACACTTAGAAATGTTGCTCGCGATGGAAGAACTATT
ATCTCCTCAATTCACCAACCAAGTAGTGAAGTTTTCGACCTCTTTGATGACCTTTTCTTA
CTCTCTGGTGGTGAAACAATCTACTTTGGAGAAGCAAAAAAGGCTTTAGAGTTCTTTGCC
GAAGCGGGCTTTCCATGCCCAAGCAGAAGAAGTCCTTCTGATCACTTCCTTCGTTGTATC
AATTCAGACTTCGACATTGTAACAGCCACCCTCAAAGGATCTCAAAGACTTCGTGAAATC
CAGCAATCATCAAATTCTGTCATGGAATTGGCAACAGCAGAGATCAAAGCAATTCTTGCA
GATAAGTACAGGGGCTCAAAGTATCAAAGACGGGCAGGGGAGAGGATTCGGGAAATATCA
ACTTCTGAAGGACTTGTGCCTGGATCACAAAGTGGGAGCCAAGCGAGTTGGTGGAAGCAA
CTTGTCACATTGACACGGCGATCTTTTCTGAACATGTCTAGGGACGTTGGATATTACTGG
CTGAGGTTAATGATCTACATAGTAGTGTCAATTTGTGTGGGTACTATCTATTTTGATGTT
GGCACTAGCTATACTGCAATCTTGGCTCGGTGTGCTTGTGGTGGATTCATATCAGGCTTC
ATGACCTTCATGTCCATTGGAGCCTTCCCGTCCTTTGTCGAAGAAATGAAGGTCTTCTAT
AGAGAAAGGCTTAATGGGCATTATGGAGTTGCTGTGTTTATACTATCAAACTTCTTGTCT
TCATTCCCATACTTGGTGGCAATTTCAGTGGCTACAGGGACTATTACATTTTACATGGTG
AAGTTTCGGTCTGAATTTTCTCATTATGTGTTCTTCTGCCTCAATCTTTTTAGTTGCATT
GCTGTTGTTGAGAGCTGCATGATGGTTGTGGCTTCATTAGTCCCAAATTTCTTGATGGGA
ATCATAACTGGGGCTGGACTTATTGGAATCATGATGATGACTTCGGGATTCTTCCGTTTG
TTGTCTGATCTTCCCAAGCCTTTTTGGCGCTATCCTGTTTCATATATCAGTTATGGGGCA
TGGGGACTACAGGGAGCATACAAGAATGACTTGATTGGGCTGGAGTTTGAACCTCTTATA
TCTGGTGACCCCAAACTGAAGGGTTCAGAAATCATCACAAACATGCTCGGAATTCAACTG
GATCATTCCAAGTGGTGGGACTTGACTGCTTTATTTATCATTCTCATATCTTACAGACTC
ATCTTCTTCCTCATCCTCAAGTTCAAGGAAAGAGCCTGGCCATACTTTCAGACACTTCAC
AGCAACAGAACTCTGCAGCAACTTAATCGCAGGCCTTCATTCCATACCAAGCCTTCATTT
CCTTCAAAAAGACACCAGGCCCTCCATTCACTGTCTTCTCAAGAGGGTCTCAGCTCCCCA
ATCGCCTAG

Peptide Sequence

PEP ID

VIT_06s0061g00230.t01
PEP Infomation

pep chromosome:12X:6:17493185:17498593:1 gene:VIT_06s0061g00230 transcript:VIT_06s0061g00230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGPSGSGKSTLLDSLAGRLSRNVIMTGNVLLNGRKRRLDCGFVAYVTQEDVLLGTLTVRE
TITYSAHLRLPTSMTKEEINGIVDGTIMEMGLQDCSDRLIGNWHLRGISGGEKKRLSIAL
EILTRPRLLFLDEPTSGLDSASAFFVIQTLRNVARDGRTIISSIHQPSSEVFDLFDDLFL
LSGGETIYFGEAKKALEFFAEAGFPCPSRRSPSDHFLRCINSDFDIVTATLKGSQRLREI
QQSSNSVMELATAEIKAILADKYRGSKYQRRAGERIREISTSEGLVPGSQSGSQASWWKQ
LVTLTRRSFLNMSRDVGYYWLRLMIYIVVSICVGTIYFDVGTSYTAILARCACGGFISGF
MTFMSIGAFPSFVEEMKVFYRERLNGHYGVAVFILSNFLSSFPYLVAISVATGTITFYMV
KFRSEFSHYVFFCLNLFSCIAVVESCMMVVASLVPNFLMGIITGAGLIGIMMMTSGFFRL
LSDLPKPFWRYPVSYISYGAWGLQGAYKNDLIGLEFEPLISGDPKLKGSEIITNMLGIQL
DHSKWWDLTALFIILISYRLIFFLILKFKERAWPYFQTLHSNRTLQQLNRRPSFHTKPSF
PSKRHQALHSLSSQEGLSSPIA

Transcript Sequence

Transcript ID

VIT_06s0061g00230.t01
Transcript Infomation

cdna chromosome:12X:6:17493185:17498593:1 gene:VIT_06s0061g00230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGGACATGGGGAGGGGGATAGAGATGGCCAGTGGTGGCAGTGACGGTGTGGAAGTGGAG
GATGGGTGGTCTAGAGGCAGAGCTCATGAGGGAGGAACTTACTTGGTGTGGGAGGATCTC
ACTGTGGTGCTGCCAAACTTCGGGAAGGGACCCACTAAGCGGTTGCTTCAGGGGCTAACT
GGCTATGCTGAGCCTGGTAGGATCATGGCCATTATGGGTCCTTCTGGCTCTGGGAAATCC
ACTCTTCTTGACTCTCTAGCAGGTAGACTCTCAAGAAATGTGATAATGACTGGAAATGTT
CTTCTTAATGGGAGGAAGAGGAGGCTAGACTGTGGATTTGTTGCTTATGTGACCCAAGAA
GATGTACTGCTGGGAACGCTCACAGTTAGGGAAACCATAACATACTCAGCACATTTGAGG
CTTCCAACTAGCATGACCAAAGAAGAGATTAATGGGATTGTAGATGGAACAATCATGGAA
ATGGGTCTACAAGATTGCTCTGATAGACTGATTGGGAACTGGCATTTAAGAGGTATAAGT
GGTGGAGAGAAGAAGAGATTGAGCATTGCCCTTGAAATTCTTACGCGTCCCCGTCTTTTG
TTTCTTGATGAACCTACAAGTGGCCTAGACAGTGCCTCAGCTTTCTTCGTTATACAAACA
CTTAGAAATGTTGCTCGCGATGGAAGAACTATTATCTCCTCAATTCACCAACCAAGTAGT
GAAGTTTTCGACCTCTTTGATGACCTTTTCTTACTCTCTGGTGGTGAAACAATCTACTTT
GGAGAAGCAAAAAAGGCTTTAGAGTTCTTTGCCGAAGCGGGCTTTCCATGCCCAAGCAGA
AGAAGTCCTTCTGATCACTTCCTTCGTTGTATCAATTCAGACTTCGACATTGTAACAGCC
ACCCTCAAAGGATCTCAAAGACTTCGTGAAATCCAGCAATCATCAAATTCTGTCATGGAA
TTGGCAACAGCAGAGATCAAAGCAATTCTTGCAGATAAGTACAGGGGCTCAAAGTATCAA
AGACGGGCAGGGGAGAGGATTCGGGAAATATCAACTTCTGAAGGACTTGTGCCTGGATCA
CAAAGTGGGAGCCAAGCGAGTTGGTGGAAGCAACTTGTCACATTGACACGGCGATCTTTT
CTGAACATGTCTAGGGACGTTGGATATTACTGGCTGAGGTTAATGATCTACATAGTAGTG
TCAATTTGTGTGGGTACTATCTATTTTGATGTTGGCACTAGCTATACTGCAATCTTGGCT
CGGTGTGCTTGTGGTGGATTCATATCAGGCTTCATGACCTTCATGTCCATTGGAGCCTTC
CCGTCCTTTGTCGAAGAAATGAAGGTCTTCTATAGAGAAAGGCTTAATGGGCATTATGGA
GTTGCTGTGTTTATACTATCAAACTTCTTGTCTTCATTCCCATACTTGGTGGCAATTTCA
GTGGCTACAGGGACTATTACATTTTACATGGTGAAGTTTCGGTCTGAATTTTCTCATTAT
GTGTTCTTCTGCCTCAATCTTTTTAGTTGCATTGCTGTTGTTGAGAGCTGCATGATGGTT
GTGGCTTCATTAGTCCCAAATTTCTTGATGGGAATCATAACTGGGGCTGGACTTATTGGA
ATCATGATGATGACTTCGGGATTCTTCCGTTTGTTGTCTGATCTTCCCAAGCCTTTTTGG
CGCTATCCTGTTTCATATATCAGTTATGGGGCATGGGGACTACAGGGAGCATACAAGAAT
GACTTGATTGGGCTGGAGTTTGAACCTCTTATATCTGGTGACCCCAAACTGAAGGGTTCA
GAAATCATCACAAACATGCTCGGAATTCAACTGGATCATTCCAAGTGGTGGGACTTGACT
GCTTTATTTATCATTCTCATATCTTACAGACTCATCTTCTTCCTCATCCTCAAGTTCAAG
GAAAGAGCCTGGCCATACTTTCAGACACTTCACAGCAACAGAACTCTGCAGCAACTTAAT
CGCAGGCCTTCATTCCATACCAAGCCTTCATTTCCTTCAAAAAGACACCAGGCCCTCCAT
TCACTGTCTTCTCAAGAGGGTCTCAGCTCCCCAATCGCCTAGTGTGACATACCTATACTT
TACAAGCTATAACCGTTATCTGGCGGTTTGTTTGTATTGATTAGTTTATGAGCTTACTAT
TTATTGCTTGTAGAAAGATAATCTTTCTTGTAAACCCCATAAATCTCCCTGTTATTACAC
CATAAATCACAGCCCCTGGGGTACTGGGGGGTGTTGTGCCAAAGAAAATCTGGTGATCAA
AACTCCCAGCCTGTGACCAAAATAGAACAAAGATACAAAGTTGATTACTTCTATATAAGA
GACACGTGTTGATGTGTGT