Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0061g00120.t01
CDS Infomation

cds chromosome:12X:6:17352205:17354052:1 gene:VIT_06s0061g00120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucan endo-1,3-beta-glucosidase [Source:UniProtKB/Swiss-Prot;Acc:A7PQW3]
Sequence

ATGGCATTAACAAGGAACAGGCCCTTTGTTGTGGTGCTGCTTCTTGGGTTTGTCATCATG
TCCACCATCACAATAGGAGCACAATCCATTGGAGTTTGTTATGGAAGGAATGGCAACAAC
TTGCCTAGCGCATCACAAGTTATAAATCTCTACAAAAGCAATGGCATTGGAAGCATGCGA
ATCTATGATCCAAATTCAGATACTCTCCAAGCGCTTAGAGGATCGGACATAGAACTTATC
CTCGACGTCCCCAACACCGACCTTCAATCCCTTGCCTCCGATGCTTCAGCTGCAGCTACC
TGGGTGCAAAACAACGTAGTAAACTACGCATCAGAAGTGAAGTTCCGCTACATCGCTGTT
GGGAATGAAGTTTTACCCACCGGCTCAAATGCTCAGTACGCCCAATACGTCCTTCCTGCC
ATGAAAAACGTTCAGAGTGCAATAACATCCGCAGGCCTGCAAGACCAAATCAAGGTCTCT
ACCGCAACATTTTCAGCCGTCCTCGGCAAATCATACCCTCCATCTGAAGGATCCTTCAGT
GATGATGTCTCTTCATTCATAAACCCAATCATAAGCTTCCTCGCTGAGAATGGCTCCCCA
CTCCTGGCCAATATATATCCCTACTTCAGTTACACTGGCGACACACAAAACATTCGGCTT
GATTACGCCTTATTCACTGCATCAGGGGTTGTGGTACAAGACGGGAGCTACCAGTATCAG
AACCTTTTCGATGCCTTGTTGGATGCCCTCTATGCTGCTCTTGAAAAGGCGGGCGGGTCT
AACTTGAAGATCGTTGTATCCGAGAGTGGCTGGCCATCCGAGGGAGGTACTGCAGCGACA
GTGGACAATGCCAGAACTTACTACAAGAATTTGATTAATCATGTGAAGGGAGGGACTCCA
AGGAAGTCTGGAGCCATAGAGACCTACTTGTTTGCTATGTTTGATGAAAACCAGAAGACT
GGACTTGAGACTGAGAAACATTTCGGCCTCTTCACCCCTGGTCAAGAGTCCAAATACCAA
ATCAGTTTCAGTTGA

Peptide Sequence

PEP ID

VIT_06s0061g00120.t01
PEP Infomation

pep chromosome:12X:6:17352205:17354052:1 gene:VIT_06s0061g00120 transcript:VIT_06s0061g00120.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucan endo-1,3-beta-glucosidase [Source:UniProtKB/Swiss-Prot;Acc:A7PQW3]
Sequence

MALTRNRPFVVVLLLGFVIMSTITIGAQSIGVCYGRNGNNLPSASQVINLYKSNGIGSMR
IYDPNSDTLQALRGSDIELILDVPNTDLQSLASDASAAATWVQNNVVNYASEVKFRYIAV
GNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQDQIKVSTATFSAVLGKSYPPSEGSFS
DDVSSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTASGVVVQDGSYQYQ
NLFDALLDALYAALEKAGGSNLKIVVSESGWPSEGGTAATVDNARTYYKNLINHVKGGTP
RKSGAIETYLFAMFDENQKTGLETEKHFGLFTPGQESKYQISFS

Transcript Sequence

Transcript ID

VIT_06s0061g00120.t01
Transcript Infomation

cdna chromosome:12X:6:17352205:17354052:1 gene:VIT_06s0061g00120 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glucan endo-1,3-beta-glucosidase [Source:UniProtKB/Swiss-Prot;Acc:A7PQW3]
Sequence

AGCTTGGCCAGCCCTCCATAGATTCATCAAAATTGTTGTGCTTTTGTCTTCCTTTGAATA
TTCTCCAATATGGCATTAACAAGGAACAGGCCCTTTGTTGTGGTGCTGCTTCTTGGGTTT
GTCATCATGTCCACCATCACAATAGGAGCACAATCCATTGGAGTTTGTTATGGAAGGAAT
GGCAACAACTTGCCTAGCGCATCACAAGTTATAAATCTCTACAAAAGCAATGGCATTGGA
AGCATGCGAATCTATGATCCAAATTCAGATACTCTCCAAGCGCTTAGAGGATCGGACATA
GAACTTATCCTCGACGTCCCCAACACCGACCTTCAATCCCTTGCCTCCGATGCTTCAGCT
GCAGCTACCTGGGTGCAAAACAACGTAGTAAACTACGCATCAGAAGTGAAGTTCCGCTAC
ATCGCTGTTGGGAATGAAGTTTTACCCACCGGCTCAAATGCTCAGTACGCCCAATACGTC
CTTCCTGCCATGAAAAACGTTCAGAGTGCAATAACATCCGCAGGCCTGCAAGACCAAATC
AAGGTCTCTACCGCAACATTTTCAGCCGTCCTCGGCAAATCATACCCTCCATCTGAAGGA
TCCTTCAGTGATGATGTCTCTTCATTCATAAACCCAATCATAAGCTTCCTCGCTGAGAAT
GGCTCCCCACTCCTGGCCAATATATATCCCTACTTCAGTTACACTGGCGACACACAAAAC
ATTCGGCTTGATTACGCCTTATTCACTGCATCAGGGGTTGTGGTACAAGACGGGAGCTAC
CAGTATCAGAACCTTTTCGATGCCTTGTTGGATGCCCTCTATGCTGCTCTTGAAAAGGCG
GGCGGGTCTAACTTGAAGATCGTTGTATCCGAGAGTGGCTGGCCATCCGAGGGAGGTACT
GCAGCGACAGTGGACAATGCCAGAACTTACTACAAGAATTTGATTAATCATGTGAAGGGA
GGGACTCCAAGGAAGTCTGGAGCCATAGAGACCTACTTGTTTGCTATGTTTGATGAAAAC
CAGAAGACTGGACTTGAGACTGAGAAACATTTCGGCCTCTTCACCCCTGGTCAAGAGTCC
AAATACCAAATCAGTTTCAGTTGAAGTGATGCAGGATTGGAACATAATCCTATATCCATA
CTTAATTTTGAGTAATTGTCATGGAAATAAGAGTGCATGCCCATGCACGTATGCTTCTTT
TTCTTTACAATGATATTG