Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03780.t01
CDS Infomation

cds chromosome:12X:6:17103606:17113806:-1 gene:VIT_06s0009g03780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTACCAATCTCCAGCTCCTTCCGATTCATGGCTTCCCTCTCTCCAGCTGGAAGTGC
CCGAAATACCCTCAAAGAGTCCCAGTATTTTCCCTTCAGCCACTCAATCCTCCTCCTCCT
CCTCCTCCTTCTCCCAAGAGCATCTTAAGCTCAAGAAGAAGAGCCTCAGTTGCTCATGCT
GTGAAAGAAGAAGTGATTCAATCCCCAAATTCAGACCCCGCCCTTGATTCCAAAACCTCC
CCTCCTGCTTCTTCCAAGCTCGTTCTCGTCGTTGGCGGCTCTGGCGGTGTCGGGCAGTTG
ATAGTAGCATCTTTGCTTGACCGTAATATTAAGTCCCGCCTCTTACTACGGGATCCTGAG
AAAGCAACTAGCTTGTTTGGTAAACAGGATGAGGAGACATTACAGGTATATAAAGGGGAC
ACCCGGAATCTGGAGGATCTAAATTCATCTATATTTGAGGGAGTCACACATGTGATTTGC
TGTACAGGAACAACTGCTTTTCCTTCAAAGCGATGGGATGGGGATAATACACCAGAAAAA
GTAGATTGGGAAGGTGTTAGAAATCTTGTATCAGCACTGCCTTCATCACTGAAGAGAATT
GTTCTTGTTTCATCCGTGGGAGTAACCAAGTTCAATGAGCTACCATGGAGTATCATGAAC
CTTTTTGGTGTTCTCAAGTATAAGAAGATGGGGGAGGATTTTCTTTGCAGTTCTGGTCTT
CCATTTACCATAATCAGAGCAGGTAGATTGACTGATGGACCATACACATCATATGATCTG
AATACTCTGCTCAAAGCTACAGCTGGGCAACGACGTGCTGTCCTCATGGGTCAAGGAGAT
AAACTTGTTGGAGAGGTTAGCAGAATTGTAGTTGCTGAAGCTTGCATACAGGCATTGGAC
ATAGAATTTACTGAAGGCAAAATTTATGAAATCAATTCAGTTGAGGGAGATGGTCCAGGA
AGTGATCCGCAGAAGTGGCAGGAGCTATTCAAAACTGCTGAAGCCAAATAA

Peptide Sequence

PEP ID

VIT_06s0009g03780.t01
PEP Infomation

pep chromosome:12X:6:17103606:17113806:-1 gene:VIT_06s0009g03780 transcript:VIT_06s0009g03780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MATNLQLLPIHGFPLSSWKCPKYPQRVPVFSLQPLNPPPPPPPSPKSILSSRRRASVAHA
VKEEVIQSPNSDPALDSKTSPPASSKLVLVVGGSGGVGQLIVASLLDRNIKSRLLLRDPE
KATSLFGKQDEETLQVYKGDTRNLEDLNSSIFEGVTHVICCTGTTAFPSKRWDGDNTPEK
VDWEGVRNLVSALPSSLKRIVLVSSVGVTKFNELPWSIMNLFGVLKYKKMGEDFLCSSGL
PFTIIRAGRLTDGPYTSYDLNTLLKATAGQRRAVLMGQGDKLVGEVSRIVVAEACIQALD
IEFTEGKIYEINSVEGDGPGSDPQKWQELFKTAEAK

Transcript Sequence

Transcript ID

VIT_06s0009g03780.t01
Transcript Infomation

cdna chromosome:12X:6:17103606:17113806:-1 gene:VIT_06s0009g03780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCATGGCTACCAATCTCCAGCTCCTTCCGATTCATGGCTTCCCTCTCTCCAGCTGGAAGT
GCCCGAAATACCCTCAAAGAGTCCCAGTATTTTCCCTTCAGCCACTCAATCCTCCTCCTC
CTCCTCCTCCTTCTCCCAAGAGCATCTTAAGCTCAAGAAGAAGAGCCTCAGTTGCTCATG
CTGTGAAAGAAGAAGTGATTCAATCCCCAAATTCAGACCCCGCCCTTGATTCCAAAACCT
CCCCTCCTGCTTCTTCCAAGCTCGTTCTCGTCGTTGGCGGCTCTGGCGGTGTCGGGCAGT
TGATAGTAGCATCTTTGCTTGACCGTAATATTAAGTCCCGCCTCTTACTACGGGATCCTG
AGAAAGCAACTAGCTTGTTTGGTAAACAGGATGAGGAGACATTACAGGTATATAAAGGGG
ACACCCGGAATCTGGAGGATCTAAATTCATCTATATTTGAGGGAGTCACACATGTGATTT
GCTGTACAGGAACAACTGCTTTTCCTTCAAAGCGATGGGATGGGGATAATACACCAGAAA
AAGTAGATTGGGAAGGTGTTAGAAATCTTGTATCAGCACTGCCTTCATCACTGAAGAGAA
TTGTTCTTGTTTCATCCGTGGGAGTAACCAAGTTCAATGAGCTACCATGGAGTATCATGA
ACCTTTTTGGTGTTCTCAAGTATAAGAAGATGGGGGAGGATTTTCTTTGCAGTTCTGGTC
TTCCATTTACCATAATCAGAGCAGGTAGATTGACTGATGGACCATACACATCATATGATC
TGAATACTCTGCTCAAAGCTACAGCTGGGCAACGACGTGCTGTCCTCATGGGTCAAGGAG
ATAAACTTGTTGGAGAGGTTAGCAGAATTGTAGTTGCTGAAGCTTGCATACAGGCATTGG
ACATAGAATTTACTGAAGGCAAAATTTATGAAATCAATTCAGTTGAGGGAGATGGTCCAG
GAAGTGATCCGCAGAAGTGGCAGGAGCTATTCAAAACTGCTGAAGCCAAATAATTGAAAC
CCCAAGCTCACCAGCTTCTTTCATTTGTACCGTACAAGATGTTCTGAGTTGAAAGAGGTC
AATTGTCACTCATCACCATGAATTGTATATAGTTGTAATATGCGTCGTTACATTCTCCAT
TCTTTCCCAGTTAACTCTTGTACTTAATCTTCCTTCAAGTGATTTGTATAAAGTTTTTGG
CTTTGTTTCCCTTTTTTCTTTGGATAAACGTGAAAAGTGTTCAAGTACATGTTACAATAA
TTTAATCTTTTTTCCCT