Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03670.t01
CDS Infomation

cds chromosome:12X:6:16925040:16926240:-1 gene:VIT_06s0009g03670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAATGAGGATCAAGGCCCAGATGATCATTTTGATCGCCTCTCAGATGAGCTTGTCACC
CTCATCTTCAACAAGGTCCTGGACGCCAAGTCCCTCTGCAGGTGCTCTGTGGTCTCCAAG
CGATTCGCTTCCCTTATTCCCCAAACCGACAATGTTTCACTCATAGTTCCTTCTTCAAAC
AACTCCAAACCCAAGCGTGGTACTTTTTTCATCGTCTTCCTAAAGTATCTGGTCGGCAAA
TTCATCACCAAACCGCTTCAGTTCCTGTACCAAACAGTCGTCCCAAAACTGTCGGTGAAC
TCAGATGAAGATGAAACATACCAGTTTACCACGGAAGTTCTAAGGAATTTCATTAACATT
AAGAGGCTGAGTATTCAACTTCCTTGCCATGGCGACGAGCTGGGGTCCAAGGGTACTGAT
TATTTCCTTAGGTGGAAAGCTGAGTTTGGGAGAGAACTCGAGAGCTGTGTGGTACTAGGG
GCAACATCTTTCCATAGAAGTAGCTCAACTCCAAGTTCTCACAAAAAGCACAAGCAACTT
CATGAGCCCATGTCGGCAACCGACGAGCTGAAGACGAGAGTTGTGTGGATGATATCAAGT
TTGATTGCAGCATCCACAAGGCACTGGTTGTTGAAACAGATCATTGCAGACATCCCCATG
AATCCCCAGAGTGTAATGATTTCAGATTCGAGTAAACAAGGAAGGCTGATCATGGGAGAA
GAACAATTCAAGGAGCTGAGAAGAAGCATGAACCCCACAGCACCAGTGGAGAGAACAATG
GTTCCAGCAGTGCGTGTGAAACTGTGGCATGTGCCCGTCCTAGAGTTGCCAGCTTCTGGG
CGTGTGATGAATGGGGCAACGCTTATTGTCATCAGACCAGCGGAGAGGACGATGAAAATG
GAGAGTGAGGATGAAGGTTTGGGAGATTGTTTTGAGGGGGAAGAGGAAGAAGAGGATTTG
AGGGAAGCTGTGAGAGAGATGCTGAAGGAGAAGAAGCCTTACAAGATTGAGATGGATTCA
TTATAA

Peptide Sequence

PEP ID

VIT_06s0009g03670.t01
PEP Infomation

pep chromosome:12X:6:16925040:16926240:-1 gene:VIT_06s0009g03670 transcript:VIT_06s0009g03670.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MNEDQGPDDHFDRLSDELVTLIFNKVLDAKSLCRCSVVSKRFASLIPQTDNVSLIVPSSN
NSKPKRGTFFIVFLKYLVGKFITKPLQFLYQTVVPKLSVNSDEDETYQFTTEVLRNFINI
KRLSIQLPCHGDELGSKGTDYFLRWKAEFGRELESCVVLGATSFHRSSSTPSSHKKHKQL
HEPMSATDELKTRVVWMISSLIAASTRHWLLKQIIADIPMNPQSVMISDSSKQGRLIMGE
EQFKELRRSMNPTAPVERTMVPAVRVKLWHVPVLELPASGRVMNGATLIVIRPAERTMKM
ESEDEGLGDCFEGEEEEEDLREAVREMLKEKKPYKIEMDSL

Transcript Sequence

Transcript ID

VIT_06s0009g03670.t01
Transcript Infomation

cdna chromosome:12X:6:16925040:16926240:-1 gene:VIT_06s0009g03670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGGATCGAAGACCAACTCCCTTTTCATCATCTTTGACAGAAATTAAGGAATGAATGAG
GATCAAGGCCCAGATGATCATTTTGATCGCCTCTCAGATGAGCTTGTCACCCTCATCTTC
AACAAGGTCCTGGACGCCAAGTCCCTCTGCAGGTGCTCTGTGGTCTCCAAGCGATTCGCT
TCCCTTATTCCCCAAACCGACAATGTTTCACTCATAGTTCCTTCTTCAAACAACTCCAAA
CCCAAGCGTGGTACTTTTTTCATCGTCTTCCTAAAGTATCTGGTCGGCAAATTCATCACC
AAACCGCTTCAGTTCCTGTACCAAACAGTCGTCCCAAAACTGTCGGTGAACTCAGATGAA
GATGAAACATACCAGTTTACCACGGAAGTTCTAAGGAATTTCATTAACATTAAGAGGCTG
AGTATTCAACTTCCTTGCCATGGCGACGAGCTGGGGTCCAAGGGTACTGATTATTTCCTT
AGGTGGAAAGCTGAGTTTGGGAGAGAACTCGAGAGCTGTGTGGTACTAGGGGCAACATCT
TTCCATAGAAGTAGCTCAACTCCAAGTTCTCACAAAAAGCACAAGCAACTTCATGAGCCC
ATGTCGGCAACCGACGAGCTGAAGACGAGAGTTGTGTGGATGATATCAAGTTTGATTGCA
GCATCCACAAGGCACTGGTTGTTGAAACAGATCATTGCAGACATCCCCATGAATCCCCAG
AGTGTAATGATTTCAGATTCGAGTAAACAAGGAAGGCTGATCATGGGAGAAGAACAATTC
AAGGAGCTGAGAAGAAGCATGAACCCCACAGCACCAGTGGAGAGAACAATGGTTCCAGCA
GTGCGTGTGAAACTGTGGCATGTGCCCGTCCTAGAGTTGCCAGCTTCTGGGCGTGTGATG
AATGGGGCAACGCTTATTGTCATCAGACCAGCGGAGAGGACGATGAAAATGGAGAGTGAG
GATGAAGGTTTGGGAGATTGTTTTGAGGGGGAAGAGGAAGAAGAGGATTTGAGGGAAGCT
GTGAGAGAGATGCTGAAGGAGAAGAAGCCTTACAAGATTGAGATGGATTCATTATAAGTC
TTGGCATTACAAAATTTACTTGTAATTAAGATAATGAAGATAGTAATCCATTTTTTAATT
CATTTTATTGTTTGATTATTTTTTAAATAAAAATAAATTGGTAATATTTATTATTTTATT
A