Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03520.t01
CDS Infomation

cds chromosome:12X:6:16772356:16786006:1 gene:VIT_06s0009g03520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGAACTGTGAACGTCTTGCCAATCTTGGTCTAGCAGGTTTAACATTGGCGCCACTG
GTTATGAAGGTAGATCCAAATTTAAATGTCATTTTAACAGCATGTCTCACAGTGTATGTA
GGTTGCTACCGCTCTGTTAAGCCAACTCCCCCTTCTGAGACAATGTCTAATGAACATGCT
ATGCGCTTTCCTTTTGTTGGGAGTGCAATGCTGTTATCACTATTCCTTCTCTTCAAGTTT
CTATCAAAAGACTTGGTTAATGCTGTACTGACATGCTACTTCTTTGTGCTTGGGATCATC
GCTCTTTCGGCAACATTGCTACCTGCAATTAGACGTTATTTGCCAAAGCATTGGAATGAT
GACCCTATCATCTGGCATTTTCCATATTTTCGCTCTTTGGAGATTGAGTTCACAAGATCT
CAGATCGTTGCAGCAATACCAGGGACCTTTTTCTGTGCATGGTATGCTTCCCAGAAGCAT
TGGCTAGCCAACAATATATTGGGCCTCGCTTTCTGCATTCAGGGTATTGAAATGCTCTCA
CTTGGGTCTTTTAAAACTGGTGCCATCCTTTTGGCAGGACTTTTTGTTTATGATATTTTC
TGGGTCTTCTTCACTCCAGTGATGGTCAGTGTTGCAAAGTCCTTCGATGCTCCTATTAAG
CTTTTGTTCCCAACAGCTGATTCTGCCCGGCCATTTTCCATGCTTGGACTTGGTGACATT
GTAATCCCTGGCATTTTTGTAGCATTGGCATTGCGATTTGATGTGTCCAGAGGGAAAGGG
AACCAGTACTTTAAGAGTGCATTTTTGGGATATACAACCGGTTTGGTTGTAACAATTGTT
GTCATGAACTGGTTTCAAGCTGCACAGCCTGCACTTCTTTATATTGTACCAGCAGTTATT
GGATTTATGGCTGCTCATTGCATATGGAATGGCGAAGTTAAACCGTTGTTGGAGTTTGAT
GAATCTAAGACTGCTAGCTCATCAAAAGATGATGGTGATGAAAAATCAAGCAAAAAGGTG
GAGTAA

Peptide Sequence

PEP ID

VIT_06s0009g03520.t01
PEP Infomation

pep chromosome:12X:6:16772356:16786006:1 gene:VIT_06s0009g03520 transcript:VIT_06s0009g03520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKNCERLANLGLAGLTLAPLVMKVDPNLNVILTACLTVYVGCYRSVKPTPPSETMSNEHA
MRFPFVGSAMLLSLFLLFKFLSKDLVNAVLTCYFFVLGIIALSATLLPAIRRYLPKHWND
DPIIWHFPYFRSLEIEFTRSQIVAAIPGTFFCAWYASQKHWLANNILGLAFCIQGIEMLS
LGSFKTGAILLAGLFVYDIFWVFFTPVMVSVAKSFDAPIKLLFPTADSARPFSMLGLGDI
VIPGIFVALALRFDVSRGKGNQYFKSAFLGYTTGLVVTIVVMNWFQAAQPALLYIVPAVI
GFMAAHCIWNGEVKPLLEFDESKTASSSKDDGDEKSSKKVE

Transcript Sequence

Transcript ID

VIT_06s0009g03520.t01
Transcript Infomation

cdna chromosome:12X:6:16772356:16786006:1 gene:VIT_06s0009g03520 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCATTTCTCTCTCTTCACGACGGCATCTCCGATCCGTATGGTCAACATACAGTAGAGAGA
GAAACTGTGCGATCGTCTGTCTCTCTCTCTCCTCAGCCATCAGGTAGGCGGTGATTGGTT
GAGTTTTTGCTAAGAAAGAGGCAATTGGAATAGGTACAATGAAGAACTGTGAACGTCTTG
CCAATCTTGGTCTAGCAGGTTTAACATTGGCGCCACTGGTTATGAAGGTAGATCCAAATT
TAAATGTCATTTTAACAGCATGTCTCACAGTGTATGTAGGTTGCTACCGCTCTGTTAAGC
CAACTCCCCCTTCTGAGACAATGTCTAATGAACATGCTATGCGCTTTCCTTTTGTTGGGA
GTGCAATGCTGTTATCACTATTCCTTCTCTTCAAGTTTCTATCAAAAGACTTGGTTAATG
CTGTACTGACATGCTACTTCTTTGTGCTTGGGATCATCGCTCTTTCGGCAACATTGCTAC
CTGCAATTAGACGTTATTTGCCAAAGCATTGGAATGATGACCCTATCATCTGGCATTTTC
CATATTTTCGCTCTTTGGAGATTGAGTTCACAAGATCTCAGATCGTTGCAGCAATACCAG
GGACCTTTTTCTGTGCATGGTATGCTTCCCAGAAGCATTGGCTAGCCAACAATATATTGG
GCCTCGCTTTCTGCATTCAGGGTATTGAAATGCTCTCACTTGGGTCTTTTAAAACTGGTG
CCATCCTTTTGGCAGGACTTTTTGTTTATGATATTTTCTGGGTCTTCTTCACTCCAGTGA
TGGTCAGTGTTGCAAAGTCCTTCGATGCTCCTATTAAGCTTTTGTTCCCAACAGCTGATT
CTGCCCGGCCATTTTCCATGCTTGGACTTGGTGACATTGTAATCCCTGGCATTTTTGTAG
CATTGGCATTGCGATTTGATGTGTCCAGAGGGAAAGGGAACCAGTACTTTAAGAGTGCAT
TTTTGGGATATACAACCGGTTTGGTTGTAACAATTGTTGTCATGAACTGGTTTCAAGCTG
CACAGCCTGCACTTCTTTATATTGTACCAGCAGTTATTGGATTTATGGCTGCTCATTGCA
TATGGAATGGCGAAGTTAAACCGTTGTTGGAGTTTGATGAATCTAAGACTGCTAGCTCAT
CAAAAGATGATGGTGATGAAAAATCAAGCAAAAAGGTGGAGTAAGTTGAAACCCTTTCCA
GCTGAGGAAAGAAATAGTGTTGTTTCCATGGAGGATCCAAAAGCATTTTTAGCTAAACCA
TGGGCTAACTTATGCAACTGCTCAGAATGCCATTGCAACAGATTTTGGAATTTTATGCGG
CTAATAATATAAAGTAGCATCCAATGACAATACACCCATGTTATATTTTCATCTGAACTG
CTCATTTTAGCATCTGACAGTGCCATTGCCAATTTTTCCTGATGTATCATGTGTTTGGAA
GACTCAAGACACTTAAATTCAGTTCCAGTATAATACTACATTTACGACT