Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03360.t01
CDS Infomation

cds chromosome:12X:6:16559508:16566742:-1 gene:VIT_06s0009g03360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTGTGAGGAAAAGCATGGGTCGTGCATCGCTACTGCTTTTGGTGCTTCTAGCACTA
GGGTTTTTCTTTGCTACCTATAATTTATTAACTATGATAATGCACAACAGAGGGAGTGGT
TTGGGGAATTGGATGACAGATGATTTCGATGTCTTTGATCCCATTACTAGGATGACTAAG
GAGACAAAGAAAGTGGGGAATCGTAATTTGTATTTCCATGTCGCCCTTACGGCAACTGAT
GCTCCCTATAGTCAATGGCAGTGTCGGATTATGTACTATTGGTATAAGAAAGTGAAAGAC
ATGCCTGGATCAGAAATGGGAGGGTTCACCCGGGTATTGCATTCAGGAAGTCCTGATAGT
TTGATGGATGAGATTCCGACTTTTGTGGTTTATCCCCTTCCTGATGGGCTGGATCGGGGA
TACATTGTCTTAAATAGACCATGGGCATTTGTGCAATGGCTGGAAAAAGCTACGATTGAG
GAAGAATACATTCTAATGGCAGAGCCTGACCACATATTTGTAAATCCTTTACCTAACTTG
GCACATGGAGGCCATCCAGCAGGGTTCCCATTTTTCTACATCAAACCGGCTGACAATGAG
AAAATTATAAGGAAGTTTTATCCCAAGGAGAAGGGTCCTGTCACTGATGTTGATCCAATT
GGAAATTCTCCTGTAATTATTGAAAAGTCCCAACTGGAGGAAATTGCACCTACATGGATG
AATATTTCTTTGAGAATGAAAGATGATCCAGAGACAGATAAAGCTTTTGGATGGGTGCTA
GAAATGTATGCATATGCTGTAGCATCTGCATTGCATGGTGTGCAGCATATCCTTCGTAAA
GACTTCATGCTACAGCCTCCATGGGATTTGGAAGTTGGGAAGAAGTTTATTATCCATTAT
ACATATGGATGTGACTACAATTTGAAGGGAGAGCTGACATATGGAAAGATTGGAGAATGG
CGTTTTGACAAGAGATCATTTCTTAGTGGCCCTCCACCAAAGAATCTCACCCTACCTCCT
CCTGGTGTTCCTGAAAGTGTGGTAAGACTTGTACAAATGGTGAATGAGGCTACTGCTAAT
ATTCCTGGGTGGGATGTGGAGTAA

Peptide Sequence

PEP ID

VIT_06s0009g03360.t01
PEP Infomation

pep chromosome:12X:6:16559508:16566742:-1 gene:VIT_06s0009g03360 transcript:VIT_06s0009g03360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIVRKSMGRASLLLLVLLALGFFFATYNLLTMIMHNRGSGLGNWMTDDFDVFDPITRMTK
ETKKVGNRNLYFHVALTATDAPYSQWQCRIMYYWYKKVKDMPGSEMGGFTRVLHSGSPDS
LMDEIPTFVVYPLPDGLDRGYIVLNRPWAFVQWLEKATIEEEYILMAEPDHIFVNPLPNL
AHGGHPAGFPFFYIKPADNEKIIRKFYPKEKGPVTDVDPIGNSPVIIEKSQLEEIAPTWM
NISLRMKDDPETDKAFGWVLEMYAYAVASALHGVQHILRKDFMLQPPWDLEVGKKFIIHY
TYGCDYNLKGELTYGKIGEWRFDKRSFLSGPPPKNLTLPPPGVPESVVRLVQMVNEATAN
IPGWDVE

Transcript Sequence

Transcript ID

VIT_06s0009g03360.t01
Transcript Infomation

cdna chromosome:12X:6:16559508:16566742:-1 gene:VIT_06s0009g03360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGAGATTTTATGTTTCGATATTAGTCTAGGATGATTGTGAGGAAAAGCATGGGTCGTGC
ATCGCTACTGCTTTTGGTGCTTCTAGCACTAGGGTTTTTCTTTGCTACCTATAATTTATT
AACTATGATAATGCACAACAGAGGGAGTGGTTTGGGGAATTGGATGACAGATGATTTCGA
TGTCTTTGATCCCATTACTAGGATGACTAAGGAGACAAAGAAAGTGGGGAATCGTAATTT
GTATTTCCATGTCGCCCTTACGGCAACTGATGCTCCCTATAGTCAATGGCAGTGTCGGAT
TATGTACTATTGGTATAAGAAAGTGAAAGACATGCCTGGATCAGAAATGGGAGGGTTCAC
CCGGGTATTGCATTCAGGAAGTCCTGATAGTTTGATGGATGAGATTCCGACTTTTGTGGT
TTATCCCCTTCCTGATGGGCTGGATCGGGGATACATTGTCTTAAATAGACCATGGGCATT
TGTGCAATGGCTGGAAAAAGCTACGATTGAGGAAGAATACATTCTAATGGCAGAGCCTGA
CCACATATTTGTAAATCCTTTACCTAACTTGGCACATGGAGGCCATCCAGCAGGGTTCCC
ATTTTTCTACATCAAACCGGCTGACAATGAGAAAATTATAAGGAAGTTTTATCCCAAGGA
GAAGGGTCCTGTCACTGATGTTGATCCAATTGGAAATTCTCCTGTAATTATTGAAAAGTC
CCAACTGGAGGAAATTGCACCTACATGGATGAATATTTCTTTGAGAATGAAAGATGATCC
AGAGACAGATAAAGCTTTTGGATGGGTGCTAGAAATGTATGCATATGCTGTAGCATCTGC
ATTGCATGGTGTGCAGCATATCCTTCGTAAAGACTTCATGCTACAGCCTCCATGGGATTT
GGAAGTTGGGAAGAAGTTTATTATCCATTATACATATGGATGTGACTACAATTTGAAGGG
AGAGCTGACATATGGAAAGATTGGAGAATGGCGTTTTGACAAGAGATCATTTCTTAGTGG
CCCTCCACCAAAGAATCTCACCCTACCTCCTCCTGGTGTTCCTGAAAGTGTGGTAAGACT
TGTACAAATGGTGAATGAGGCTACTGCTAATATTCCTGGGTGGGATGTGGAGTAAATAGT
GGCTTTGATCAAAGGAAGACAACAAGCGTGGATCCTAATTTTGGTTACTGATATCAGTGG
CCCCGAGGACAAATCCATGGATACAAATTACAGGTAACAGAAAGGAACGGTCTGCATAGA
TAAAAGAAATGTCTTGATATGTCAAATAACACATATTTTGTTATTCACATTTCTAAATTT
AAACCCTGGAGACCACTAAATTTTTTTGTATAAATATTTGTTACATTCCTTGGATTGAGT
TTATAGTTCAAGTTTTTGCTTATCAAATTGTTCAGTGCCTCCTCTAAACTGAAAACTCTT
TGTAGTCATGATACCCTTTTGAATTATATACATATTCGGACATGTATACCTTTCATGGCA