Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03350.t01
CDS Infomation

cds chromosome:12X:6:16555054:16558478:1 gene:VIT_06s0009g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCCATCACCAAGCACAGCTCTTCAATGGAGATCCTCATCTTCTTTATACACCTACTC
CTCTGCACCACCGTGACTCCTTTATCGAGCCCCATCAAGACCATCGTCGTGCTGGTAATG
GAGAACCGCTCCTTCGACCATATGCTCGGTTGGATGAAACAAATCAACCCTCAAATCAAC
GGCGTCGATGGTTCTGAATATAACCCCATCTCTCCATCCGACCCAACCTCCCCTCTCGTC
TTCTTCACCAACACCTCCCACTACGTGGACGCCGATCCACCCCACTCCTTCCAGGCCATT
CGCGAGCAAATATTCGGTTCCGACAACGCCTCCGCCGACCATCCACCAATGAACGGCTTC
GCCCAACAAGCCACCACCACCTCCGCCGCCCCCCAAACCGTCATGTCCGGCTTCGACCCC
TCCATGGTCGCCGTCTACAAAACCCTCGTCTCGGAGTTCGCCGTCTTCGACAGGTGGTTC
GCCTCCGTTCCGGCGTCCACCCAGCCCAACCGCCTCTTCGTCCACTCCGCCACCTCCGCC
GGCGCCACCGGCAACATCCCGACAATGCTGGCCAAGGGCTACCCCCAGCGAACCATCTTC
GACAATCTGGACGCCGCAGGAGTTCCATTCGGAATATACTACCAGAATATTCCGGCGACA
CTGTTCTACCAGAGCTTGAGGAAGCTCAAGTATCTCGACAAATTCCATTTCTATGGTTTG
TCCTTTGAGAGGCACGCGCGGGAGGGGAAGCTGCCAGGGTATACTGTGATAGAGCAGCGG
TACATGGACACTAAGGTGGAGCCGGGGAACGACGACCATCCGTCGCACGATGTGTATGAG
GGACAGATGTTTGTGAAGGAGGTGTACGAGACACTAAGGGCGAGCCCGCAGTGGAACGAG
ACTCTGTTGGTGATCACCTACGACGAGCATGGCGGATTTTATGATCACGTGCCGACACCG
GTCCGAGGGGTGCCGAGCCCGGACGGGATAGCGGGGCCAGAGCCGTTTCTTTTTGGGTTC
GACCGTTTGGGTGTTAGGGTCCCAACCATCATGGTCTCACCATGGATTGACAAGGGCACT
GTTGTTCATGGGCCTAATGGATCACCATTCCCGACATCGGAGTATGAGCATTCATCCATT
CCGGCAACTGTGAAGAAGATCTTCAACCTGAGCTCTCCTTTCCTAACCAAGAGGGACGAA
TGGGCTGGCACCTTTGAAGGGATTGTCCAGACCCGGACCCAACCCAGAACTGATTGTCCA
GAGCAACTTCCAAAACCGATGAGAATGAGGAAGGGAGAGGCAAATGAGAGTGCGAAGCTT
AGTGAATTCCAGGAAGAGCTACTGCAGCTTGCAGCAGTGCTGAAAGGAGACAACATCCTG
ACAAGTTACCCAGAAAAGATTGGAAAGCAAATGAATGTGAAGCAAGGGAAGAAGTATATG
GAAGACGCAGTGAAACAGTTCCTCGAGGCAGGGCTTTCTGCTAAGAGAATGGGTGTTAAT
GAAGAACAAATTGTCAAAATGAGGCCATCCCTCACCACAAGATCACCATAA

Peptide Sequence

PEP ID

VIT_06s0009g03350.t01
PEP Infomation

pep chromosome:12X:6:16555054:16558478:1 gene:VIT_06s0009g03350 transcript:VIT_06s0009g03350.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSITKHSSSMEILIFFIHLLLCTTVTPLSSPIKTIVVLVMENRSFDHMLGWMKQINPQIN
GVDGSEYNPISPSDPTSPLVFFTNTSHYVDADPPHSFQAIREQIFGSDNASADHPPMNGF
AQQATTTSAAPQTVMSGFDPSMVAVYKTLVSEFAVFDRWFASVPASTQPNRLFVHSATSA
GATGNIPTMLAKGYPQRTIFDNLDAAGVPFGIYYQNIPATLFYQSLRKLKYLDKFHFYGL
SFERHAREGKLPGYTVIEQRYMDTKVEPGNDDHPSHDVYEGQMFVKEVYETLRASPQWNE
TLLVITYDEHGGFYDHVPTPVRGVPSPDGIAGPEPFLFGFDRLGVRVPTIMVSPWIDKGT
VVHGPNGSPFPTSEYEHSSIPATVKKIFNLSSPFLTKRDEWAGTFEGIVQTRTQPRTDCP
EQLPKPMRMRKGEANESAKLSEFQEELLQLAAVLKGDNILTSYPEKIGKQMNVKQGKKYM
EDAVKQFLEAGLSAKRMGVNEEQIVKMRPSLTTRSP

Transcript Sequence

Transcript ID

VIT_06s0009g03350.t01
Transcript Infomation

cdna chromosome:12X:6:16555054:16558478:1 gene:VIT_06s0009g03350 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AACACTTCAGATCACCATCTCTCCCAAGAAATGTCCATCACCAAGCACAGCTCTTCAATG
GAGATCCTCATCTTCTTTATACACCTACTCCTCTGCACCACCGTGACTCCTTTATCGAGC
CCCATCAAGACCATCGTCGTGCTGGTAATGGAGAACCGCTCCTTCGACCATATGCTCGGT
TGGATGAAACAAATCAACCCTCAAATCAACGGCGTCGATGGTTCTGAATATAACCCCATC
TCTCCATCCGACCCAACCTCCCCTCTCGTCTTCTTCACCAACACCTCCCACTACGTGGAC
GCCGATCCACCCCACTCCTTCCAGGCCATTCGCGAGCAAATATTCGGTTCCGACAACGCC
TCCGCCGACCATCCACCAATGAACGGCTTCGCCCAACAAGCCACCACCACCTCCGCCGCC
CCCCAAACCGTCATGTCCGGCTTCGACCCCTCCATGGTCGCCGTCTACAAAACCCTCGTC
TCGGAGTTCGCCGTCTTCGACAGGTGGTTCGCCTCCGTTCCGGCGTCCACCCAGCCCAAC
CGCCTCTTCGTCCACTCCGCCACCTCCGCCGGCGCCACCGGCAACATCCCGACAATGCTG
GCCAAGGGCTACCCCCAGCGAACCATCTTCGACAATCTGGACGCCGCAGGAGTTCCATTC
GGAATATACTACCAGAATATTCCGGCGACACTGTTCTACCAGAGCTTGAGGAAGCTCAAG
TATCTCGACAAATTCCATTTCTATGGTTTGTCCTTTGAGAGGCACGCGCGGGAGGGGAAG
CTGCCAGGGTATACTGTGATAGAGCAGCGGTACATGGACACTAAGGTGGAGCCGGGGAAC
GACGACCATCCGTCGCACGATGTGTATGAGGGACAGATGTTTGTGAAGGAGGTGTACGAG
ACACTAAGGGCGAGCCCGCAGTGGAACGAGACTCTGTTGGTGATCACCTACGACGAGCAT
GGCGGATTTTATGATCACGTGCCGACACCGGTCCGAGGGGTGCCGAGCCCGGACGGGATA
GCGGGGCCAGAGCCGTTTCTTTTTGGGTTCGACCGTTTGGGTGTTAGGGTCCCAACCATC
ATGGTCTCACCATGGATTGACAAGGGCACTGTTGTTCATGGGCCTAATGGATCACCATTC
CCGACATCGGAGTATGAGCATTCATCCATTCCGGCAACTGTGAAGAAGATCTTCAACCTG
AGCTCTCCTTTCCTAACCAAGAGGGACGAATGGGCTGGCACCTTTGAAGGGATTGTCCAG
ACCCGGACCCAACCCAGAACTGATTGTCCAGAGCAACTTCCAAAACCGATGAGAATGAGG
AAGGGAGAGGCAAATGAGAGTGCGAAGCTTAGTGAATTCCAGGAAGAGCTACTGCAGCTT
GCAGCAGTGCTGAAAGGAGACAACATCCTGACAAGTTACCCAGAAAAGATTGGAAAGCAA
ATGAATGTGAAGCAAGGGAAGAAGTATATGGAAGACGCAGTGAAACAGTTCCTCGAGGCA
GGGCTTTCTGCTAAGAGAATGGGTGTTAATGAAGAACAAATTGTCAAAATGAGGCCATCC
CTCACCACAAGATCACCATAACCCTCAACCAAGAACCCATAACAAGATACTATGTGAGAA
AGATGCCAAAATATATGAAATTGGAACTGTTGTTTTATGTCCATATAAATGA