Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g03150.t01
CDS Infomation

cds chromosome:12X:6:16322877:16325979:-1 gene:VIT_06s0009g03150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCAACTGTTGCTCCCAAGGCAACACCAACGATGGCCCAGCTAATGACAAGGGAGAA
ACCATCCCTGAGCCTACGACCAACCCGGAAACTGCTGCGCCTGAGAGTTCAGCCGCGCAG
AATAAGCCTGCAGCCAGTTCCACTCCTGCTGCTTCATCCGGAGCGTCTACCAAGCCTAGC
AAGCCAACCCCTATAGGACCTGTGTTGGGCAGGCCTATGGAAGATGTTCGTACCCTTTAC
ACTATAGGAAAGGAGCTCGGTCGCGGGCAGTTTGGTGTTACCCATTTGTGTACCAGCAAG
GCAACCGGCGAGCAGTTTGCTTGTAAGACAATAGCCAAGCGGAAACTTGTAAACAAGGAG
GATATTGAGGATGTCAGGAGGGAAGTTCAGATCATGCACCATTTGACGGGTCAGCCTAAT
ATAGTCGAGCTTAAGGGTGCCTATGAGGACAAGCAATCGGTTCATCTGGTGATGGAGTTG
TGTGCAGGAGGAGAGCTCTTTGATCGTATTATCTCAAAGGGGCATTACACCGAGCGTGGT
GCAGCATCTTTGCTGAGGACTATTGTTCAGATTGTCCACACCTGCCATTCCATGGGAGTT
GTCCATAGGGATCTCAAGCCTGAAAATTTCCTTCTGCTGAACAAGGATGAGAATGCACCT
CTCAAGGCTACAGATTTCGGTTTATCCGTGTTCTTCAAACAAGGAGAAGTATTTAGAGAT
ATTGTTGGTAGTGCATATTACATTGCACCTGAAGTATTGAAGAGAAGATATGGACCAGAG
GTCGATATATGGAGTGTTGGGGTTATGTTGTATATCCTTCTATGTGGAGTTCCTCCCTTC
TGGGCAGAATCGGAGCATGGGATATTCAATGCAATCTTACGCGGCCACATTGATTTTACA
AGCGACCCATGGCCCACTATTTCATCTGGTGCCAAGGATCTTGTCAGAAAGATGTTAACT
TCAGACCCAAAGCAGAGGATAACAGCATTCCAAGTTCTGAATCATCCATGGATTAAGGAG
GATGGAGAAGCACCTGATACTCCTCTTGACAATGCAGTTTTTGAAAGGTTCAAACAGTTT
AGAGCAATGAACAAGTTCAAGAAAGTTGCTCTTCGGGTCATTGCTGGCTGTCTATCAGAG
GAAGAAATCATGGGATTGAAGCAAATGTTTAAGGGCATGGACACTGATAATAGTGGAACC
ATAACACTTGAAGAGCTGAAGCAAGGTCTGTCCAAGCAAGGGACTAAGCTGTCTGAATAT
GAAGTTAAACAGTTGATGGAAGCTGCTGATGCAGATGGCAATGGAACCATTGACTATGAT
GAGTTTATCACGGCAACAATGCACCTGAACAGAATGGACAAAGAAGACCATCTTTACACA
GCCTTCCAATACTTCGACAAAGATAACAGCGGGTATATTACAACCGAAGAGTTGGAGCAA
GCTCTCCATGAATTTGGCATGCACGATGGAAGGGACATAAAAGAAATCCTTAATGAAGTT
GACGGTGATAATGATGGCCGGATCAACTACGATGAGTTCGTGACAATGATGAGAAAAGGG
AACCCAGAACCGAACCCAAAGAAGAGACGGGATGTATTTGTTTGA

Peptide Sequence

PEP ID

VIT_06s0009g03150.t01
PEP Infomation

pep chromosome:12X:6:16322877:16325979:-1 gene:VIT_06s0009g03150 transcript:VIT_06s0009g03150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNCCSQGNTNDGPANDKGETIPEPTTNPETAAPESSAAQNKPAASSTPAASSGASTKPS
KPTPIGPVLGRPMEDVRTLYTIGKELGRGQFGVTHLCTSKATGEQFACKTIAKRKLVNKE
DIEDVRREVQIMHHLTGQPNIVELKGAYEDKQSVHLVMELCAGGELFDRIISKGHYTERG
AASLLRTIVQIVHTCHSMGVVHRDLKPENFLLLNKDENAPLKATDFGLSVFFKQGEVFRD
IVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLCGVPPFWAESEHGIFNAILRGHIDFT
SDPWPTISSGAKDLVRKMLTSDPKQRITAFQVLNHPWIKEDGEAPDTPLDNAVFERFKQF
RAMNKFKKVALRVIAGCLSEEEIMGLKQMFKGMDTDNSGTITLEELKQGLSKQGTKLSEY
EVKQLMEAADADGNGTIDYDEFITATMHLNRMDKEDHLYTAFQYFDKDNSGYITTEELEQ
ALHEFGMHDGRDIKEILNEVDGDNDGRINYDEFVTMMRKGNPEPNPKKRRDVFV

Transcript Sequence

Transcript ID

VIT_06s0009g03150.t01
Transcript Infomation

cdna chromosome:12X:6:16322877:16325979:-1 gene:VIT_06s0009g03150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGCAACTGTTGCTCCCAAGGCAACACCAACGATGGCCCAGCTAATGACAAGGGAGAA
ACCATCCCTGAGCCTACGACCAACCCGGAAACTGCTGCGCCTGAGAGTTCAGCCGCGCAG
AATAAGCCTGCAGCCAGTTCCACTCCTGCTGCTTCATCCGGAGCGTCTACCAAGCCTAGC
AAGCCAACCCCTATAGGACCTGTGTTGGGCAGGCCTATGGAAGATGTTCGTACCCTTTAC
ACTATAGGAAAGGAGCTCGGTCGCGGGCAGTTTGGTGTTACCCATTTGTGTACCAGCAAG
GCAACCGGCGAGCAGTTTGCTTGTAAGACAATAGCCAAGCGGAAACTTGTAAACAAGGAG
GATATTGAGGATGTCAGGAGGGAAGTTCAGATCATGCACCATTTGACGGGTCAGCCTAAT
ATAGTCGAGCTTAAGGGTGCCTATGAGGACAAGCAATCGGTTCATCTGGTGATGGAGTTG
TGTGCAGGAGGAGAGCTCTTTGATCGTATTATCTCAAAGGGGCATTACACCGAGCGTGGT
GCAGCATCTTTGCTGAGGACTATTGTTCAGATTGTCCACACCTGCCATTCCATGGGAGTT
GTCCATAGGGATCTCAAGCCTGAAAATTTCCTTCTGCTGAACAAGGATGAGAATGCACCT
CTCAAGGCTACAGATTTCGGTTTATCCGTGTTCTTCAAACAAGGAGAAGTATTTAGAGAT
ATTGTTGGTAGTGCATATTACATTGCACCTGAAGTATTGAAGAGAAGATATGGACCAGAG
GTCGATATATGGAGTGTTGGGGTTATGTTGTATATCCTTCTATGTGGAGTTCCTCCCTTC
TGGGCAGAATCGGAGCATGGGATATTCAATGCAATCTTACGCGGCCACATTGATTTTACA
AGCGACCCATGGCCCACTATTTCATCTGGTGCCAAGGATCTTGTCAGAAAGATGTTAACT
TCAGACCCAAAGCAGAGGATAACAGCATTCCAAGTTCTGAATCATCCATGGATTAAGGAG
GATGGAGAAGCACCTGATACTCCTCTTGACAATGCAGTTTTTGAAAGGTTCAAACAGTTT
AGAGCAATGAACAAGTTCAAGAAAGTTGCTCTTCGGGTCATTGCTGGCTGTCTATCAGAG
GAAGAAATCATGGGATTGAAGCAAATGTTTAAGGGCATGGACACTGATAATAGTGGAACC
ATAACACTTGAAGAGCTGAAGCAAGGTCTGTCCAAGCAAGGGACTAAGCTGTCTGAATAT
GAAGTTAAACAGTTGATGGAAGCTGCTGATGCAGATGGCAATGGAACCATTGACTATGAT
GAGTTTATCACGGCAACAATGCACCTGAACAGAATGGACAAAGAAGACCATCTTTACACA
GCCTTCCAATACTTCGACAAAGATAACAGCGGGTATATTACAACCGAAGAGTTGGAGCAA
GCTCTCCATGAATTTGGCATGCACGATGGAAGGGACATAAAAGAAATCCTTAATGAAGTT
GACGGTGATAATGATGGCCGGATCAACTACGATGAGTTCGTGACAATGATGAGAAAAGGG
AACCCAGAACCGAACCCAAAGAAGAGACGGGATGTATTTGTTTGA