Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02860.t01
CDS Infomation

cds chromosome:12X:6:15798846:15800864:1 gene:VIT_06s0009g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCATAGATACAAGCCTCTTGCTTAAGCTTGCTGCAGCAATTCTACTCTTCTTTATC
ACCCGCTTCTTCATTCGTTCTCTCCTTCCCAAACCTTCCCGGAAGCTCCCTCCTGGCCCC
AGAGGGTGGCCGCTCCTCGGCGCTCTTCCTCTTCTAGGTAACATGCCTCATGTTGCACTA
GCAAAGATGGCCAAAAGATACGGACCTGTCATGTTCTTGAAAATGGGCACTAACTGCATG
GTGGTGGCCTCAACTCCGGAGGCAGCTCAGGCTTTCCTTAAAACCCTAGACATTAATGTC
TCGAACCGCCCGCCTAATGCCGGTGCAACACACTTGGCCTATGATGCCCAAGACATGGTT
TTTGCGGATTATGGGCCAAGGTGGAAGCTCCTGAGAAAGCTAAGCAACTTACACATGCTT
GGTGGGAAGGCTCTTGAGGACTGGTCTCAGGTTCGAACTGTTGAGCTAGGTCACATGCTT
CGAGCCATGCTTGAGTTGAGCCAGCGAGAGGAGCCGGTGGTGGTGCCGGAGATGTTATCT
TTTTCCGTGGCCAACATGATAGGGCAAGTGATACTAAGCCGCCGGGTGTTTGAAACAAAA
GGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCACTGCTGGGTAC
TTCAATATTGGCGATTTTATTCCGTCCATCGCATGGCTGGACATCCAAGGGATCGAGCGC
GGGATGAAGCATTTACATAAGAAGTTCGACAAGTTATTGACAAGGATGATAGAGGAGCAC
ACGGCATCAGCCCATGAGCGCAAGGGAAACCCAGATTTTCTGGACGTAGTCATGGGCCAT
CAAGGAAATTCTACAGGGGAGAAGCTCACCCTTACCAACATTAAGGCGCTCCTCCTGAAT
TTATTTACTGCAGGAACAGACACTTCATCAAGCGTAATCGAGTGGTCTCTGGCTGAGATG
TTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGTGATTGGAAGG
AGCCGGCGGCTCGTGGAGTCTGACTTACCAAAACTTCCATACCTACAAGCCATATGCAAG
GAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTCAGCCCAGGCA
TGTGAAGTGAACGGCTACTACATCCCAAAGAACACTAGACTTAGCGTGAACATATGGGCA
ATCGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGAAAGGTTTTTA
AGTGGAAGAAATGCAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGATCCCGTTTGGG
GCTGGACGAAGGATTTGTGCTGGCACTAGAATGGGAATAGTGCTAGTTGAGTACATTTTG
GGGTCGTTGGTACACTCATTTGACTGGAAAATGCCGGATGGAGTTGAGATCAACATGGAC
GAAGCTTTCGGGCTTGCTTTGCAGAAGGCAGTTTCTCTTTCGGCTATGGTGACACCTAGG
CTTCACCAGAGTGCGTATGCAGTCTGA

Peptide Sequence

PEP ID

VIT_06s0009g02860.t01
PEP Infomation

pep chromosome:12X:6:15798846:15800864:1 gene:VIT_06s0009g02860 transcript:VIT_06s0009g02860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAIDTSLLLKLAAAILLFFITRFFIRSLLPKPSRKLPPGPRGWPLLGALPLLGNMPHVAL
AKMAKRYGPVMFLKMGTNCMVVASTPEAAQAFLKTLDINVSNRPPNAGATHLAYDAQDMV
FADYGPRWKLLRKLSNLHMLGGKALEDWSQVRTVELGHMLRAMLELSQREEPVVVPEMLS
FSVANMIGQVILSRRVFETKGSESNEFKDMVVELMTTAGYFNIGDFIPSIAWLDIQGIER
GMKHLHKKFDKLLTRMIEEHTASAHERKGNPDFLDVVMGHQGNSTGEKLTLTNIKALLLN
LFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGRSRRLVESDLPKLPYLQAICK
ESFRKHPSTPLNLPRVSAQACEVNGYYIPKNTRLSVNIWAIGRDPDVWESPEEFRPERFL
SGRNAKIDPRGNDFELIPFGAGRRICAGTRMGIVLVEYILGSLVHSFDWKMPDGVEINMD
EAFGLALQKAVSLSAMVTPRLHQSAYAV

Transcript Sequence

Transcript ID

VIT_06s0009g02860.t01
Transcript Infomation

cdna chromosome:12X:6:15798846:15800864:1 gene:VIT_06s0009g02860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCACTAAGCCATGGCCATAGATACAAGCCTCTTGCTTAAGCTTGCTGCAGCAATTCTACT
CTTCTTTATCACCCGCTTCTTCATTCGTTCTCTCCTTCCCAAACCTTCCCGGAAGCTCCC
TCCTGGCCCCAGAGGGTGGCCGCTCCTCGGCGCTCTTCCTCTTCTAGGTAACATGCCTCA
TGTTGCACTAGCAAAGATGGCCAAAAGATACGGACCTGTCATGTTCTTGAAAATGGGCAC
TAACTGCATGGTGGTGGCCTCAACTCCGGAGGCAGCTCAGGCTTTCCTTAAAACCCTAGA
CATTAATGTCTCGAACCGCCCGCCTAATGCCGGTGCAACACACTTGGCCTATGATGCCCA
AGACATGGTTTTTGCGGATTATGGGCCAAGGTGGAAGCTCCTGAGAAAGCTAAGCAACTT
ACACATGCTTGGTGGGAAGGCTCTTGAGGACTGGTCTCAGGTTCGAACTGTTGAGCTAGG
TCACATGCTTCGAGCCATGCTTGAGTTGAGCCAGCGAGAGGAGCCGGTGGTGGTGCCGGA
GATGTTATCTTTTTCCGTGGCCAACATGATAGGGCAAGTGATACTAAGCCGCCGGGTGTT
TGAAACAAAAGGGTCGGAGTCAAATGAGTTCAAGGACATGGTGGTGGAGCTCATGACCAC
TGCTGGGTACTTCAATATTGGCGATTTTATTCCGTCCATCGCATGGCTGGACATCCAAGG
GATCGAGCGCGGGATGAAGCATTTACATAAGAAGTTCGACAAGTTATTGACAAGGATGAT
AGAGGAGCACACGGCATCAGCCCATGAGCGCAAGGGAAACCCAGATTTTCTGGACGTAGT
CATGGGCCATCAAGGAAATTCTACAGGGGAGAAGCTCACCCTTACCAACATTAAGGCGCT
CCTCCTGAATTTATTTACTGCAGGAACAGACACTTCATCAAGCGTAATCGAGTGGTCTCT
GGCTGAGATGTTGAAAAACCCGAGCATCCTCAAGCGTGCTCACGAAGAAATGGATCAAGT
GATTGGAAGGAGCCGGCGGCTCGTGGAGTCTGACTTACCAAAACTTCCATACCTACAAGC
CATATGCAAGGAAAGCTTCCGGAAGCACCCATCCACCCCATTGAACCTTCCTCGTGTCTC
AGCCCAGGCATGTGAAGTGAACGGCTACTACATCCCAAAGAACACTAGACTTAGCGTGAA
CATATGGGCAATCGGGCGAGACCCTGATGTCTGGGAAAGCCCGGAAGAATTCAGGCCAGA
AAGGTTTTTAAGTGGAAGAAATGCAAAAATTGATCCTCGTGGAAATGATTTTGAGTTGAT
CCCGTTTGGGGCTGGACGAAGGATTTGTGCTGGCACTAGAATGGGAATAGTGCTAGTTGA
GTACATTTTGGGGTCGTTGGTACACTCATTTGACTGGAAAATGCCGGATGGAGTTGAGAT
CAACATGGACGAAGCTTTCGGGCTTGCTTTGCAGAAGGCAGTTTCTCTTTCGGCTATGGT
GACACCTAGGCTTCACCAGAGTGCGTATGCAGTCTGAGCTCAAGCTGTTCAGATCAAAAC
CCAGGGCTAGCTACTATATGGCATGGATTTGTTTTAGTTTCCTTTGGGTTAGTA