Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02790.t01
CDS Infomation

cds chromosome:12X:6:15634711:15656052:1 gene:VIT_06s0009g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCACTGCTCGCGTATCAGCTCCTTCGCATCCTATCCCTCACTCTTCTTCTCTCA
TCGTTCTCTCGTATCTCTAAATCAAGTGAGTTTTGTGATGCTGGAACTGGATTTGGTGAT
TCTGGATGTGTAGTCTCGTCGAAGTCTGCATCAAAGCTGTTAATCAAGGGAGGAACTGTT
GTGAATGCTCATCATCAGGAGATTGCTGATGTTTATGTAGAGGATGGGATCATTGTTGCT
GTGAAGCCTAATATTAAGGTAGGTGATGATGTTACTGTGCTTGATGCCACCGGAAAGTTT
GTCATGCCAGGTGGAATTGATCCTCACACACACCTAGCAATGGAGTTTATGGGTACTGAG
ACCATTGATGACTTTTTCAGTGGTCAAGCTGCTGCACTAGCAGGTGGAACAACAATGCAC
ATTGACTTTGTCATACCAGTCAAGGGCAGCTTATCAAAGGGTTTGGAAGCCTATAAAGAC
AAAGCGAAAAAATCTTGTATGGATTATGGTTTTCATATGGCAATCACAAAATGGGATGAA
AATGTTTCAAGGGAGATGGAAATCATGGTTAAGGAGAAAGGCATCAACTCTTTTAAGTTT
TTCCTGGCCTACAAGGGGGCTCTCATGATCAATGATGAGCTTCTACTTGAGGGATTAAAA
AAATGCAAGTCTCTTGGTGCTTTGGCCATGGTACATGCTGAAAATGGAGATGCTGTATTT
GAAGGGCAGAAAAGAATGATAGAACTTGGCATTACTGGTCCAGAGGGACATGCACTTTCA
AGGCCACCCGTGCTAGAAGGAGAGGCAACTGCTAGAGCTATTCGGTTGGCCAGTTTTGTT
AACACGCCTCTCTATGTAGTTCATGTGATGAGCATTGATGCGATGGAAGAAATAGCTAAA
GCTCGAAAATCAGGACAGAGGGTTATTGGAGAGCCAGTAGTTTCTGGGTTAGTCCTTGAT
GATTCTGGGCTCTGGGATCCTGACTTCATCAACGCAGCAAAGTATGTAATGAGTCCCCCT
ATTAGAGCATTGGGACATGACAAGGCCCTTCAAGCTGCTCTTTCAACTGGAAATCTGCAG
CTTGTAGGGACTGATCATTGTGCCTTCAATTCCACACAGAAAGCTTTTGGAATTGATGAT
TTCCGAAAAATTCCTAATGGTGTCAATGGTATTGAGGAGAGGATGCATCTGGTTTGGGAC
ACAATGGTGGAGTCTGGCCAAATCTCAGTCACTGATTATGTCCGGATAACAAGCACTGAA
TGTGCTAGAATCTTCAACATGTATCCAAGGAAAGGAGCAATACTTGCTGGATCTGATGCA
GACATAATCATATTAAACCCAAATTCAAGCTTCCAAATAACTGCAAGGTCCCATCACTCT
AGATTAGACACAAATGTCTTTGAAGGAAGGAAAGGGAAGGGAAAGGTTGAGGTGACAATT
GCTGGAGGAAAAATTGTTTGGGAAAATGATGAACTGAAGGCAGTTCCTGGATCTGGAAAG
TACATAGAAATGCAACCTTTTAGTTATCTTTTCAATGGAATTGACAAGGTAGATGCTAAA
TACCTTTCTTCCCTCCAAGCCCCAGTACAAAGATCCAAAGCTGCAAGTTGA

Peptide Sequence

PEP ID

VIT_06s0009g02790.t01
PEP Infomation

pep chromosome:12X:6:15634711:15656052:1 gene:VIT_06s0009g02790 transcript:VIT_06s0009g02790.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSLLAYQLLRILSLTLLLSSFSRISKSSEFCDAGTGFGDSGCVVSSKSASKLLIKGGTV
VNAHHQEIADVYVEDGIIVAVKPNIKVGDDVTVLDATGKFVMPGGIDPHTHLAMEFMGTE
TIDDFFSGQAAALAGGTTMHIDFVIPVKGSLSKGLEAYKDKAKKSCMDYGFHMAITKWDE
NVSREMEIMVKEKGINSFKFFLAYKGALMINDELLLEGLKKCKSLGALAMVHAENGDAVF
EGQKRMIELGITGPEGHALSRPPVLEGEATARAIRLASFVNTPLYVVHVMSIDAMEEIAK
ARKSGQRVIGEPVVSGLVLDDSGLWDPDFINAAKYVMSPPIRALGHDKALQAALSTGNLQ
LVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRITSTE
CARIFNMYPRKGAILAGSDADIIILNPNSSFQITARSHHSRLDTNVFEGRKGKGKVEVTI
AGGKIVWENDELKAVPGSGKYIEMQPFSYLFNGIDKVDAKYLSSLQAPVQRSKAAS

Transcript Sequence

Transcript ID

VIT_06s0009g02790.t01
Transcript Infomation

cdna chromosome:12X:6:15634711:15656052:1 gene:VIT_06s0009g02790 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTGATTCGATTTGATTTTAGTAGAAATTCAACGTACACGGCCTCATCCTCTTCCGTCT
TCTTCCCATCTCAACTCCATTTTGTTCTCTGCTGCCAACCCTAAGCCATGGATTCACTGC
TCGCGTATCAGCTCCTTCGCATCCTATCCCTCACTCTTCTTCTCTCATCGTTCTCTCGTA
TCTCTAAATCAAGTGAGTTTTGTGATGCTGGAACTGGATTTGGTGATTCTGGATGTGTAG
TCTCGTCGAAGTCTGCATCAAAGCTGTTAATCAAGGGAGGAACTGTTGTGAATGCTCATC
ATCAGGAGATTGCTGATGTTTATGTAGAGGATGGGATCATTGTTGCTGTGAAGCCTAATA
TTAAGGTAGGTGATGATGTTACTGTGCTTGATGCCACCGGAAAGTTTGTCATGCCAGGTG
GAATTGATCCTCACACACACCTAGCAATGGAGTTTATGGGTACTGAGACCATTGATGACT
TTTTCAGTGGTCAAGCTGCTGCACTAGCAGGTGGAACAACAATGCACATTGACTTTGTCA
TACCAGTCAAGGGCAGCTTATCAAAGGGTTTGGAAGCCTATAAAGACAAAGCGAAAAAAT
CTTGTATGGATTATGGTTTTCATATGGCAATCACAAAATGGGATGAAAATGTTTCAAGGG
AGATGGAAATCATGGTTAAGGAGAAAGGCATCAACTCTTTTAAGTTTTTCCTGGCCTACA
AGGGGGCTCTCATGATCAATGATGAGCTTCTACTTGAGGGATTAAAAAAATGCAAGTCTC
TTGGTGCTTTGGCCATGGTACATGCTGAAAATGGAGATGCTGTATTTGAAGGGCAGAAAA
GAATGATAGAACTTGGCATTACTGGTCCAGAGGGACATGCACTTTCAAGGCCACCCGTGC
TAGAAGGAGAGGCAACTGCTAGAGCTATTCGGTTGGCCAGTTTTGTTAACACGCCTCTCT
ATGTAGTTCATGTGATGAGCATTGATGCGATGGAAGAAATAGCTAAAGCTCGAAAATCAG
GACAGAGGGTTATTGGAGAGCCAGTAGTTTCTGGGTTAGTCCTTGATGATTCTGGGCTCT
GGGATCCTGACTTCATCAACGCAGCAAAGTATGTAATGAGTCCCCCTATTAGAGCATTGG
GACATGACAAGGCCCTTCAAGCTGCTCTTTCAACTGGAAATCTGCAGCTTGTAGGGACTG
ATCATTGTGCCTTCAATTCCACACAGAAAGCTTTTGGAATTGATGATTTCCGAAAAATTC
CTAATGGTGTCAATGGTATTGAGGAGAGGATGCATCTGGTTTGGGACACAATGGTGGAGT
CTGGCCAAATCTCAGTCACTGATTATGTCCGGATAACAAGCACTGAATGTGCTAGAATCT
TCAACATGTATCCAAGGAAAGGAGCAATACTTGCTGGATCTGATGCAGACATAATCATAT
TAAACCCAAATTCAAGCTTCCAAATAACTGCAAGGTCCCATCACTCTAGATTAGACACAA
ATGTCTTTGAAGGAAGGAAAGGGAAGGGAAAGGTTGAGGTGACAATTGCTGGAGGAAAAA
TTGTTTGGGAAAATGATGAACTGAAGGCAGTTCCTGGATCTGGAAAGTACATAGAAATGC
AACCTTTTAGTTATCTTTTCAATGGAATTGACAAGGTAGATGCTAAATACCTTTCTTCCC
TCCAAGCCCCAGTACAAAGATCCAAAGCTGCAAGTTGA