Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02480.t01
CDS Infomation

cds chromosome:12X:6:15016037:15020552:-1 gene:VIT_06s0009g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGGTGATCAAGAAGGTTCTCCATTGGGTGAGGAAGAAGTTGGAAGTGGAGGAAAA
TCAGGCGGAGGGGGAGGGGGTCCTCTGAAGAAAGGACCATGGACCTCAGCAGAGGATGCA
GTTTTGATAGATTATGTCACCAAGCATGGAGAGGGGAATTGGAATGCAGTGATGAAGCAC
TCTGGACTCTCCAGATGTGGGAAAAGCTGCCGCCTCCGCTGGGCAAATCATCTGAGGCCG
GATTTGAAGAAGGGTGCTTTCACTCCCGAGGAGGAGCACCGCATAATCGAACTCCATGCC
AGAATGGGAAACAAATGGGCACGGATGGCTGCTGAGTTGCCTGGGCGTACAGATAATGAA
ATAAAAAATTACTGGAATACCCGGATCAAGAGACTGCAGCGTGCTGGCTTACCGATTTAC
CCTCCGGATGTTAGTATGAAAGCGCTGAATGGGAGTCAGCAAAGCCAAAGCATGGGTTCA
TTAACCACTGGTGAGGCAAGCCCATCTGATCTGTTGCAGGGAAACAGTTTTGAGATTCCT
GCTGTGCAATTCAAAAATTTGCAAAATCCAGGGATCTATCCTTATCCACCGACATATTTT
GATATTCTTCCGAGTGGGTCGCTAACGCAAAATCTTGGTTCATCTGATGGTCAGAACTTT
ATGTTTCCAGCAATGCATCCCCCCAAACGCTTTCGAGAATCAGAGACCTTTTTCTCTGGA
TTGAATGATGATTTCAGCAATGCTTTCCCAGCATTAGATCTGTATGATGATACATGTGAC
AACAATCCTTATTATCTGTATGATGATACATGTGAGAAGAATCCTCAGCCATTTGAGTGG
TCTTCTTCATATGATCCTGATCTAAGCACTAACCTGACATCCTTAGGTGGACTTCCTGGC
AGCCATGCCCTTTCAAATGGCAATTTCTCTTCCGAGCCCATCTCTGGGGCTATGAAGGTG
GAGCTCCCTTCTCTCCAATATTCAGAGGCTCAAGTTGGCAACTGGGGCTCACTTTTCCCA
ATGCCTTCAATTGAGTCTGTTGATACTCTGATTCAGTCCCCTCAAACTGAGCAAATTCAG
GTAGATTGTCTTTCACCATCCAAAAGTGGCCTATTGGAAGCAGTAGTTTATGAATCGCGG
AATCTGAAAAGGAAGTATGATTCATGCCACCAGGCTTCAAATACTGCTATTGAGTGCAAT
GATGTAGTGGGCAATTTGCCTCTTAATCCCTATGAAGCAGAATGGAATGTATATGTTGAC
CCAACATCTCCTTTAGGTAATTCTGCTGCATCTGTATTTAATGTGCATACTCCTATCAGC
GGAAGCTCGCCAGATGAGCCCCAGTCGATTGAGACCTTGCTAGGGTGCAAAGTTCATCCA
GAACCAGTTAATCAGATTGCTACTCACTATGATGGAAAGAAAGAAACCCCAAACCAGATG
GACTTATCCAGGCCTGATCGTTTGCTTGATGCGGATTGGTTTGGACCGGATACTGAGCGT
GGCAGGGAACAAGCTACCTGGAGAGATGCTCTAAATGCCCTTCTTGGTGAAGATATCAAC
AGCAACAAGAAGTAA

Peptide Sequence

PEP ID

VIT_06s0009g02480.t01
PEP Infomation

pep chromosome:12X:6:15016037:15020552:-1 gene:VIT_06s0009g02480 transcript:VIT_06s0009g02480.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAGDQEGSPLGEEEVGSGGKSGGGGGGPLKKGPWTSAEDAVLIDYVTKHGEGNWNAVMKH
SGLSRCGKSCRLRWANHLRPDLKKGAFTPEEEHRIIELHARMGNKWARMAAELPGRTDNE
IKNYWNTRIKRLQRAGLPIYPPDVSMKALNGSQQSQSMGSLTTGEASPSDLLQGNSFEIP
AVQFKNLQNPGIYPYPPTYFDILPSGSLTQNLGSSDGQNFMFPAMHPPKRFRESETFFSG
LNDDFSNAFPALDLYDDTCDNNPYYLYDDTCEKNPQPFEWSSSYDPDLSTNLTSLGGLPG
SHALSNGNFSSEPISGAMKVELPSLQYSEAQVGNWGSLFPMPSIESVDTLIQSPQTEQIQ
VDCLSPSKSGLLEAVVYESRNLKRKYDSCHQASNTAIECNDVVGNLPLNPYEAEWNVYVD
PTSPLGNSAASVFNVHTPISGSSPDEPQSIETLLGCKVHPEPVNQIATHYDGKKETPNQM
DLSRPDRLLDADWFGPDTERGREQATWRDALNALLGEDINSNKK

Transcript Sequence

Transcript ID

VIT_06s0009g02480.t01
Transcript Infomation

cdna chromosome:12X:6:15016037:15020552:-1 gene:VIT_06s0009g02480 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTATGTTTATGATGGAAAATTCAGGAAAATGGCCGGTGATCAAGAAGGTTCTCCATTGGG
TGAGGAAGAAGTTGGAAGTGGAGGAAAATCAGGCGGAGGGGGAGGGGGTCCTCTGAAGAA
AGGACCATGGACCTCAGCAGAGGATGCAGTTTTGATAGATTATGTCACCAAGCATGGAGA
GGGGAATTGGAATGCAGTGATGAAGCACTCTGGACTCTCCAGATGTGGGAAAAGCTGCCG
CCTCCGCTGGGCAAATCATCTGAGGCCGGATTTGAAGAAGGGTGCTTTCACTCCCGAGGA
GGAGCACCGCATAATCGAACTCCATGCCAGAATGGGAAACAAATGGGCACGGATGGCTGC
TGAGTTGCCTGGGCGTACAGATAATGAAATAAAAAATTACTGGAATACCCGGATCAAGAG
ACTGCAGCGTGCTGGCTTACCGATTTACCCTCCGGATGTTAGTATGAAAGCGCTGAATGG
GAGTCAGCAAAGCCAAAGCATGGGTTCATTAACCACTGGTGAGGCAAGCCCATCTGATCT
GTTGCAGGGAAACAGTTTTGAGATTCCTGCTGTGCAATTCAAAAATTTGCAAAATCCAGG
GATCTATCCTTATCCACCGACATATTTTGATATTCTTCCGAGTGGGTCGCTAACGCAAAA
TCTTGGTTCATCTGATGGTCAGAACTTTATGTTTCCAGCAATGCATCCCCCCAAACGCTT
TCGAGAATCAGAGACCTTTTTCTCTGGATTGAATGATGATTTCAGCAATGCTTTCCCAGC
ATTAGATCTGTATGATGATACATGTGACAACAATCCTTATTATCTGTATGATGATACATG
TGAGAAGAATCCTCAGCCATTTGAGTGGTCTTCTTCATATGATCCTGATCTAAGCACTAA
CCTGACATCCTTAGGTGGACTTCCTGGCAGCCATGCCCTTTCAAATGGCAATTTCTCTTC
CGAGCCCATCTCTGGGGCTATGAAGGTGGAGCTCCCTTCTCTCCAATATTCAGAGGCTCA
AGTTGGCAACTGGGGCTCACTTTTCCCAATGCCTTCAATTGAGTCTGTTGATACTCTGAT
TCAGTCCCCTCAAACTGAGCAAATTCAGGTAGATTGTCTTTCACCATCCAAAAGTGGCCT
ATTGGAAGCAGTAGTTTATGAATCGCGGAATCTGAAAAGGAAGTATGATTCATGCCACCA
GGCTTCAAATACTGCTATTGAGTGCAATGATGTAGTGGGCAATTTGCCTCTTAATCCCTA
TGAAGCAGAATGGAATGTATATGTTGACCCAACATCTCCTTTAGGTAATTCTGCTGCATC
TGTATTTAATGTGCATACTCCTATCAGCGGAAGCTCGCCAGATGAGCCCCAGTCGATTGA
GACCTTGCTAGGGTGCAAAGTTCATCCAGAACCAGTTAATCAGATTGCTACTCACTATGA
TGGAAAGAAAGAAACCCCAAACCAGATGGACTTATCCAGGCCTGATCGTTTGCTTGATGC
GGATTGGTTTGGACCGGATACTGAGCGTGGCAGGGAACAAGCTACCTGGAGAGATGCTCT
AAATGCCCTTCTTGGTGAAGATATCAACAGCAACAAGAAGTAAATGGGTGTTTAACTTGT
TACATCAAACCTGGATGCAGCCTTGGGTCTTAATGCAGCAGAGGAAACATGCAGGCACAG
CCAACTTGCTGAAAATGGTAGTGGCTTTTATTTTCTTTTCCTCCTATTCAGGTTTACCAG
ATTTTCTCTTGGGTCTTAGGCTGTATTTCAGGGGGAAAACTTTCCTTGTATTAGAACCAT
GAAAAACATGTTTACATTGTGTTGTGTGGTTGTCTTTGGAAGTTGGGGTTTTGCTTTTGA
ATATTAGAATTCGATGTTGTCAAACTATTTTGTGAACTTGTTATGGTTATAATCACCCAT
CTTCTGTTTCCA