Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02300.t01
CDS Infomation

cds chromosome:12X:6:14614433:14627070:1 gene:VIT_06s0009g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGTGTTCTGAAATTCCCTTCTTTCAAATTCTTAAACCCTAACCCCATCTCCCCC
ACCTCCGCGTCTGTTCAGGTGGGGTTCCGTAGATTTTCTTGCTCGGCTCCATCTTCAGCC
GCCGTCGAAGGCGATTCCAGTATTGGATCGGTTTCCCTCGGTCATCTCACTAGGCCCGAT
TTTCCCATTCTCCACCAGGAGGTAAATGGCTCAAAACTTGTCTACTTGGATAATGCAGCA
ACCTCACAGAAGCCTACTGCGGTTTTGAAGGCTTTGCAGAATTATTATGAAGCCTACAAT
TCGAATGTGCACCGTGGGATTCATTTCTTGAGTGCAAAGGCCACAGATGAGTATGAGTCT
GCAAGGAGAAAGGTGGCAGCTTTCATCAATGCGTCTGAGCCTGGAGAGATCATATTTACA
AGGAATGCTACTGAAGCTATCAATCTAGTAGCTTACTCTTGGGGCCTTTCAAATTTAAAA
CCAGAAGATGAGATTGTACTCACAGTTGCTGAGCATCATAGTGCTATTGTCCCTTGGCAA
CTTGTAGCTCAAAAGACTGGTGCCATTTTAAAGTTTGTTAATTTGACCGAAGATGAAGTT
CCAGATGTAGAGAAGTTGAAAGAAATGATTTCGAGGAAGACAAAGCTTTTGGTTGTTCAC
CATATCTCAAATGTGCTTGCTTCTGCTCTTCCTATTTATGATATTGTGCATTGGGCACAT
GCTGTTGGGGCAAAAGTTCTGGTAGATGCTTGTCAAAGTGTTCCACATATGGCGGTTGAT
GTGCAGAGGCTGGACGCTGACTTTCTTGTTGCTTCATCTCACAAGATGTGTGGGCCTACA
GGCATCGGATTCTTATATGGCAAGAGTGACCTCCTTTTTGCCATGCCTCCTTTCTTAGGT
GGAGGTGAAATGATTTCAGATGTATTTCTAGACCATTCCACTTTTGCTGAACCTCCCTCC
AGATTTGAGGCCGGAACACCAGCGATTGGGGAAGCCATTGGGTTAGGAGCAGCAATTGAT
TATCTATCAGCAATTGGCATGCAAAAGATTCATGACTATGAGGTAGATCTGGCTAATTAT
CTATATGAAAGCCTGCGTTCAGTCCCTGGAGTTCATGTTTATGGTCCAGCACCTTCGCAA
ACTGTCTTCCGTGCTGCTCTTTGTTCTTTCAATGTTGAGAATATCCACCCAACAGATATT
GCAACTTTCCTTGATCAACAGCATGGAGTTGCCATCAGATCAGGTCACCACTGTGCCCAG
CCCCTCCATCGGCATTTAGGTGTGAGTGCAAGTGCACGAGCGAGTCTCCATTTCTATAAC
ACTAAAGAGGATGTTGATGCCTTTATCCACGCACTGGTTGACACCATTAACTTCTTCTCT
TCTTTCAAGTAG

Peptide Sequence

PEP ID

VIT_06s0009g02300.t01
PEP Infomation

pep chromosome:12X:6:14614433:14627070:1 gene:VIT_06s0009g02300 transcript:VIT_06s0009g02300.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASVLKFPSFKFLNPNPISPTSASVQVGFRRFSCSAPSSAAVEGDSSIGSVSLGHLTRPD
FPILHQEVNGSKLVYLDNAATSQKPTAVLKALQNYYEAYNSNVHRGIHFLSAKATDEYES
ARRKVAAFINASEPGEIIFTRNATEAINLVAYSWGLSNLKPEDEIVLTVAEHHSAIVPWQ
LVAQKTGAILKFVNLTEDEVPDVEKLKEMISRKTKLLVVHHISNVLASALPIYDIVHWAH
AVGAKVLVDACQSVPHMAVDVQRLDADFLVASSHKMCGPTGIGFLYGKSDLLFAMPPFLG
GGEMISDVFLDHSTFAEPPSRFEAGTPAIGEAIGLGAAIDYLSAIGMQKIHDYEVDLANY
LYESLRSVPGVHVYGPAPSQTVFRAALCSFNVENIHPTDIATFLDQQHGVAIRSGHHCAQ
PLHRHLGVSASARASLHFYNTKEDVDAFIHALVDTINFFSSFK

Transcript Sequence

Transcript ID

VIT_06s0009g02300.t01
Transcript Infomation

cdna chromosome:12X:6:14614433:14627070:1 gene:VIT_06s0009g02300 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTCGTGTTGTGTTGTTTGGGATAATGGCAAGTGTTCTGAAATTCCCTTCTTTCAAATTC
TTAAACCCTAACCCCATCTCCCCCACCTCCGCGTCTGTTCAGGTGGGGTTCCGTAGATTT
TCTTGCTCGGCTCCATCTTCAGCCGCCGTCGAAGGCGATTCCAGTATTGGATCGGTTTCC
CTCGGTCATCTCACTAGGCCCGATTTTCCCATTCTCCACCAGGAGGTAAATGGCTCAAAA
CTTGTCTACTTGGATAATGCAGCAACCTCACAGAAGCCTACTGCGGTTTTGAAGGCTTTG
CAGAATTATTATGAAGCCTACAATTCGAATGTGCACCGTGGGATTCATTTCTTGAGTGCA
AAGGCCACAGATGAGTATGAGTCTGCAAGGAGAAAGGTGGCAGCTTTCATCAATGCGTCT
GAGCCTGGAGAGATCATATTTACAAGGAATGCTACTGAAGCTATCAATCTAGTAGCTTAC
TCTTGGGGCCTTTCAAATTTAAAACCAGAAGATGAGATTGTACTCACAGTTGCTGAGCAT
CATAGTGCTATTGTCCCTTGGCAACTTGTAGCTCAAAAGACTGGTGCCATTTTAAAGTTT
GTTAATTTGACCGAAGATGAAGTTCCAGATGTAGAGAAGTTGAAAGAAATGATTTCGAGG
AAGACAAAGCTTTTGGTTGTTCACCATATCTCAAATGTGCTTGCTTCTGCTCTTCCTATT
TATGATATTGTGCATTGGGCACATGCTGTTGGGGCAAAAGTTCTGGTAGATGCTTGTCAA
AGTGTTCCACATATGGCGGTTGATGTGCAGAGGCTGGACGCTGACTTTCTTGTTGCTTCA
TCTCACAAGATGTGTGGGCCTACAGGCATCGGATTCTTATATGGCAAGAGTGACCTCCTT
TTTGCCATGCCTCCTTTCTTAGGTGGAGGTGAAATGATTTCAGATGTATTTCTAGACCAT
TCCACTTTTGCTGAACCTCCCTCCAGATTTGAGGCCGGAACACCAGCGATTGGGGAAGCC
ATTGGGTTAGGAGCAGCAATTGATTATCTATCAGCAATTGGCATGCAAAAGATTCATGAC
TATGAGGTAGATCTGGCTAATTATCTATATGAAAGCCTGCGTTCAGTCCCTGGAGTTCAT
GTTTATGGTCCAGCACCTTCGCAAACTGTCTTCCGTGCTGCTCTTTGTTCTTTCAATGTT
GAGAATATCCACCCAACAGATATTGCAACTTTCCTTGATCAACAGCATGGAGTTGCCATC
AGATCAGGTCACCACTGTGCCCAGCCCCTCCATCGGCATTTAGGTGTGAGTGCAAGTGCA
CGAGCGAGTCTCCATTTCTATAACACTAAAGAGGATGTTGATGCCTTTATCCACGCACTG
GTTGACACCATTAACTTCTTCTCTTCTTTCAAGTAGAGAGGTATCCTTTCATAGTTCCCT
TCCCAACTTACATATGTTAGTTTCTCGACTTCTCACCTTATTATGGTTAATGAATGCCTT
GTGGCCCTCCATTATATGTTGATTTGGTTCAAAGCTTTGGTTTAT