Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02170.t01
CDS Infomation

cds chromosome:12X:6:14492168:14525388:-1 gene:VIT_06s0009g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTTCTAGAGTTTTTGATGTTTTAGAGGATATTTTGGAGCACCTTTTTCTGAAT
TTGCATAACATCCAGAAGAATTTACAATTTTGGCAGTCTAGAGCAGAGGAATCAAATGCT
CGAAAGGCATATTTTATGATTTTTGAGAGAGGACCACGGGCTTTTATTACTAGAACAGTT
CAATTCATACGTGAATCTGTTGCTCAGGGTTCTTCTTTGCAACTTCTGTCCCAATCTGCA
TCTGCTCACATATCTGAGAGGATAACTATCTTAACTAGCTTAAGATATTCGCTTGCTACA
TTTCTGGCACAGGTTCACATAGACATTGACAAATTTGGAGAGGAATTGGTCAATGATCCA
GAGAAGTCATTGTCCTCATTATTGGTTACTATAAATGGTTTGTTTTCAAAATTGGAGGCA
GCAATTGGCCATCTACATGCAACACGTCAGAGTGATTCTTCTGTGGATGGGAGCTATTCA
TTTCCTCTTGTGTTTGAGAAACTGCCAGACGTAAACCAGGAAGGGTCTCAGTGGACAGAT
TGTGAAATTAGAGATGCTATCAACTTGATTTATCAGAATCTATACAAACTGGATTCTTAC
CTAAGTATCCTTGTTTCCAAACATCGTAAACCGCGGAAATTAACTTTGTACTGGATTCAC
TATACGTGTGGGGCAGTGGGCTTATCAGTTTGCTCAGTGTGGCTCCTACGTCATAGTAGT
TTGATGGGAAGTAATGACATAGAAAATTGGGTTCGTGAAGCTAGGGACTCAACCATTACC
TTCTGGAATGATCATGTAGAGCAACCGATTCTGTCTATTAGAGATGAACTCTTTGAGACA
TTCAGGAAGAGGCACAGAAGCGTAATGGAGCTAGAAGATGTGCAGTTAACTGCTAATTCT
CTACACAGAATGTTGCTGACTTTTAGCGAGCAAACACAAGGTCAAAAGTTCCCAGAACAT
GCATCCGACCAGCAAATGCTTGAAATAGTTATGGCCAGGTATGAAAAAGAACTTATGCAT
CCTATTCAGAATCTTCTTAAAGGCGAGCTTGCTCATGCTTTACTCATCCAGATTCAAAAG
CTAAAACTGGATATTGAGACGGCAATGCTTGAACTCAACCAGATCCTCAGGGCCAACGAA
ATCAATTTTGCAATACTAGCTGCTTTACCAGCTTTCTTTGTCTCTCTTCTTTTAATCATG
TTAGTTCGTGCATGGGTTAAGCAGGATACCAGGGCAGAAGGTAGGGGAAGAGTTGCTCGA
ATCCAGAGGAGGCTACTTGTTGTGGAGGTTGAGAAGTGGATTATGCAGTACCAAACATGT
ATGAATCAGGGGAAGGAAAAAGATGCTCAATGCATGTTTGGAATGGTGTTATATAGTCTG
GATCGGCTATACCGTGCTGTAGAGAGGCATGCAAAGGCAACTGGAGAATGGCTCTGTTTG
AGACAAGATATTGTTGAATTGGCGAAGCCTGGACTTGACACTGCTTCTAAGCTCATTTTG
ACAGCACGGATGGAACGGGTTTATGACTGCTTGCTTCCCTCACTGAAACGGCAGTAG

Peptide Sequence

PEP ID

VIT_06s0009g02170.t01
PEP Infomation

pep chromosome:12X:6:14492168:14525388:-1 gene:VIT_06s0009g02170 transcript:VIT_06s0009g02170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEASRVFDVLEDILEHLFLNLHNIQKNLQFWQSRAEESNARKAYFMIFERGPRAFITRTV
QFIRESVAQGSSLQLLSQSASAHISERITILTSLRYSLATFLAQVHIDIDKFGEELVNDP
EKSLSSLLVTINGLFSKLEAAIGHLHATRQSDSSVDGSYSFPLVFEKLPDVNQEGSQWTD
CEIRDAINLIYQNLYKLDSYLSILVSKHRKPRKLTLYWIHYTCGAVGLSVCSVWLLRHSS
LMGSNDIENWVREARDSTITFWNDHVEQPILSIRDELFETFRKRHRSVMELEDVQLTANS
LHRMLLTFSEQTQGQKFPEHASDQQMLEIVMARYEKELMHPIQNLLKGELAHALLIQIQK
LKLDIETAMLELNQILRANEINFAILAALPAFFVSLLLIMLVRAWVKQDTRAEGRGRVAR
IQRRLLVVEVEKWIMQYQTCMNQGKEKDAQCMFGMVLYSLDRLYRAVERHAKATGEWLCL
RQDIVELAKPGLDTASKLILTARMERVYDCLLPSLKRQ

Transcript Sequence

Transcript ID

VIT_06s0009g02170.t01
Transcript Infomation

cdna chromosome:12X:6:14492168:14525388:-1 gene:VIT_06s0009g02170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTTCTAGAGTTTTTGATGTTTTAGAGGATATTTTGGAGCACCTTTTTCTGAAT
TTGCATAACATCCAGAAGAATTTACAATTTTGGCAGTCTAGAGCAGAGGAATCAAATGCT
CGAAAGGCATATTTTATGATTTTTGAGAGAGGACCACGGGCTTTTATTACTAGAACAGTT
CAATTCATACGTGAATCTGTTGCTCAGGGTTCTTCTTTGCAACTTCTGTCCCAATCTGCA
TCTGCTCACATATCTGAGAGGATAACTATCTTAACTAGCTTAAGATATTCGCTTGCTACA
TTTCTGGCACAGGTTCACATAGACATTGACAAATTTGGAGAGGAATTGGTCAATGATCCA
GAGAAGTCATTGTCCTCATTATTGGTTACTATAAATGGTTTGTTTTCAAAATTGGAGGCA
GCAATTGGCCATCTACATGCAACACGTCAGAGTGATTCTTCTGTGGATGGGAGCTATTCA
TTTCCTCTTGTGTTTGAGAAACTGCCAGACGTAAACCAGGAAGGGTCTCAGTGGACAGAT
TGTGAAATTAGAGATGCTATCAACTTGATTTATCAGAATCTATACAAACTGGATTCTTAC
CTAAGTATCCTTGTTTCCAAACATCGTAAACCGCGGAAATTAACTTTGTACTGGATTCAC
TATACGTGTGGGGCAGTGGGCTTATCAGTTTGCTCAGTGTGGCTCCTACGTCATAGTAGT
TTGATGGGAAGTAATGACATAGAAAATTGGGTTCGTGAAGCTAGGGACTCAACCATTACC
TTCTGGAATGATCATGTAGAGCAACCGATTCTGTCTATTAGAGATGAACTCTTTGAGACA
TTCAGGAAGAGGCACAGAAGCGTAATGGAGCTAGAAGATGTGCAGTTAACTGCTAATTCT
CTACACAGAATGTTGCTGACTTTTAGCGAGCAAACACAAGGTCAAAAGTTCCCAGAACAT
GCATCCGACCAGCAAATGCTTGAAATAGTTATGGCCAGGTATGAAAAAGAACTTATGCAT
CCTATTCAGAATCTTCTTAAAGGCGAGCTTGCTCATGCTTTACTCATCCAGATTCAAAAG
CTAAAACTGGATATTGAGACGGCAATGCTTGAACTCAACCAGATCCTCAGGGCCAACGAA
ATCAATTTTGCAATACTAGCTGCTTTACCAGCTTTCTTTGTCTCTCTTCTTTTAATCATG
TTAGTTCGTGCATGGGTTAAGCAGGATACCAGGGCAGAAGGTAGGGGAAGAGTTGCTCGA
ATCCAGAGGAGGCTACTTGTTGTGGAGGTTGAGAAGTGGATTATGCAGTACCAAACATGT
ATGAATCAGGGGAAGGAAAAAGATGCTCAATGCATGTTTGGAATGGTGTTATATAGTCTG
GATCGGCTATACCGTGCTGTAGAGAGGCATGCAAAGGCAACTGGAGAATGGCTCTGTTTG
AGACAAGATATTGTTGAATTGGCGAAGCCTGGACTTGACACTGCTTCTAAGCTCATTTTG
ACAGCACGGATGGAACGGGTTTATGACTGCTTGCTTCCCTCACTGAAACGGCAGTAGCTT
CATGCCCCTTTTTCTTCCATTCTTCTGCCTTCTTAATTGGCTGAATGATACAATTTTGAG
AGGTAATGCCATGTCTCTTACCTCTACCTTAATTTTGAAGAGGCCTAACCTGTTTAAAGT
TTACATCCTCCATCATTCTTTTCATTATACTGCACCCATGCAAGCAA