Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02140.t01
CDS Infomation

cds chromosome:12X:6:14459627:14461535:-1 gene:VIT_06s0009g02140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAF9]
Sequence

ATGGCCGATGAGGAGAGAAACTTGGTTGAAATATTAGAAGAGCATAATGTGATTGACATT
GCCAAGTATATAAATTATGTCAGTGCCCCACAGGCAGGCGCTGTAGCAACTTTCTCAGGC
ACGACTCGTGACACCTTTGATGGTAAAACAGTTGTAGAGTTGAGATACGAAGCTTATGTT
CCAATGGCCATCCGCTGCATCAATGACATTTGTTCATCTGCCCGAGCATCCTGGAGCCTC
ATCTCCATTGCAGTTGCCCACCGCTTGGGCCCAGTTCCAGTGGGGGAAACCAGTATCTTC
ATTGCAATCTCTTCTGTTCACCGGGCTGATGCATTGGACGCTTGTAAGTTTGTGATTGAT
GAAATTAAGGCATCAGTTCCAATATGGAAGAAGGAGGTGTATGCAAATGGAGAGGTTTGG
AAGGAGAACTCTGAGTTTTTGGAGAGGAGGTCAGAGCTTGGTAATGCTGGGCTGCAGGAG
GGAAGGACATGCTGTTCAAGAAAAGTAAAGGTGGAGACACAGGAGAGGAAGAGTTGCTGT
GGGGCTAAGGTGAAGGTGGAAGGAGAACTCAAGTTTTTGGAGAGGAGGTCAGAGCTTGGT
AATGCTGGGCTGCAGGAGGGAGGGACATGCTGTTCAAGAAAAGTAAAGGTGGAGGCACAG
GAGAGGAAGGGTTGCTGTGGGGCTAAGGTGAAGGTGGATGTTGAATGA

Peptide Sequence

PEP ID

VIT_06s0009g02140.t01
PEP Infomation

pep chromosome:12X:6:14459627:14461535:-1 gene:VIT_06s0009g02140 transcript:VIT_06s0009g02140.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAF9]
Sequence

MADEERNLVEILEEHNVIDIAKYINYVSAPQAGAVATFSGTTRDTFDGKTVVELRYEAYV
PMAIRCINDICSSARASWSLISIAVAHRLGPVPVGETSIFIAISSVHRADALDACKFVID
EIKASVPIWKKEVYANGEVWKENSEFLERRSELGNAGLQEGRTCCSRKVKVETQERKSCC
GAKVKVEGELKFLERRSELGNAGLQEGGTCCSRKVKVEAQERKGCCGAKVKVDVE

Transcript Sequence

Transcript ID

VIT_06s0009g02140.t01
Transcript Infomation

cdna chromosome:12X:6:14459627:14461535:-1 gene:VIT_06s0009g02140 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAF9]
Sequence

CCGCCGCCGCTGCCCACCTACTCCACAAACACCCATCTCCGCAGTGATACCACCACTACT
AGCTGCGGGAACTTTTCAGTTTAACAATACACCAGCAACATCTAGCCATGGCTGTGCTAG
CTCTGTAATTTCTGCAGAAAGCATAGGATAAGTTTGTTGTCTGAATTACCCAAAGCATTA
CAGTTGAGGAAGATGGCCGATGAGGAGAGAAACTTGGTTGAAATATTAGAAGAGCATAAT
GTGATTGACATTGCCAAGTATATAAATTATGTCAGTGCCCCACAGGCAGGCGCTGTAGCA
ACTTTCTCAGGCACGACTCGTGACACCTTTGATGGTAAAACAGTTGTAGAGTTGAGATAC
GAAGCTTATGTTCCAATGGCCATCCGCTGCATCAATGACATTTGTTCATCTGCCCGAGCA
TCCTGGAGCCTCATCTCCATTGCAGTTGCCCACCGCTTGGGCCCAGTTCCAGTGGGGGAA
ACCAGTATCTTCATTGCAATCTCTTCTGTTCACCGGGCTGATGCATTGGACGCTTGTAAG
TTTGTGATTGATGAAATTAAGGCATCAGTTCCAATATGGAAGAAGGAGGTGTATGCAAAT
GGAGAGGTTTGGAAGGAGAACTCTGAGTTTTTGGAGAGGAGGTCAGAGCTTGGTAATGCT
GGGCTGCAGGAGGGAAGGACATGCTGTTCAAGAAAAGTAAAGGTGGAGACACAGGAGAGG
AAGAGTTGCTGTGGGGCTAAGGTGAAGGTGGAAGGAGAACTCAAGTTTTTGGAGAGGAGG
TCAGAGCTTGGTAATGCTGGGCTGCAGGAGGGAGGGACATGCTGTTCAAGAAAAGTAAAG
GTGGAGGCACAGGAGAGGAAGGGTTGCTGTGGGGCTAAGGTGAAGGTGGATGTTGAATGA
CCACCTTATGCATCCATGAAGGAGAGCTTTATGGGTAAGAAGATCTAGTTCAAGTGCATA
TTTATTCACTCCTTTCTGTTCACTGTTAACAATCAAATGCATTTTAGGGTCTGGTGGAAA
AGCTGTGCCTGTTTTGTTGCATATCATCCATTGTTTTTTCAAATAAAATTAACGATATTT
ATATATTA