Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g02060.t01
CDS Infomation

cds chromosome:12X:6:14369781:14371690:1 gene:VIT_06s0009g02060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAG2]
Sequence

ATGGCCGATGAGGAGAGAAACTTGGTTGAAATATTAGAAGAGCATAATGTGATTGACATT
GCCAAGTATATAAATTATGTCAGTGCCCCACAGGCAGGCGCTGTAGCAACTTTCTCAGGC
ACGACTCGTGACACCTTTGATGGTAATACAGTTGTAGAGTTGAGATACGAAGCTTATGTT
CCAATGGCCATCCGCTGCATCAATGACATTTGTTCATCTGCCCGAGCATCCTGGAGCCTC
ATCTCCATTGCAGTTGCCCACCGCTTGGGCCCAGTTCCAGTGGGGGAAACCAGTATCTTC
ATTGCAATCTCTTCTGTTCACCGGGCTGATGCATTGGACGCTTGTAAGTTTGTAATTGAT
GAAATTAAGGCATCAGTTCCGATATGGAAGAAGGAGGTGTATGCAAATGGAGAGGTTTGG
AAGGAGAACTCTGAGTTTTTGGAGAGGAGGTCAGAGCTTGGTAATGCTGGGTTGCAGCAG
GGAGGTACATGCTGTTCAAGAAAGGTAAAGGTGGAGGCAAAGGAGAGGAAGAGTTGCTGT
GGGGCTAAGGTGAAGGTGGAAGGAGAACTCAAGTTTTTGGAGAGGAGGTCAGAGCTTGGT
AATGCTGGGCTGCAGGAGGGAGGGACATGCTGTTCAAGAAAAGTAAAGGTGGAGGCACAG
GAGAGGAAGGGTTGCTGTGGGGCTAAGGTGAAGGTGGATGTTGAATGA

Peptide Sequence

PEP ID

VIT_06s0009g02060.t01
PEP Infomation

pep chromosome:12X:6:14369781:14371690:1 gene:VIT_06s0009g02060 transcript:VIT_06s0009g02060.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAG2]
Sequence

MADEERNLVEILEEHNVIDIAKYINYVSAPQAGAVATFSGTTRDTFDGNTVVELRYEAYV
PMAIRCINDICSSARASWSLISIAVAHRLGPVPVGETSIFIAISSVHRADALDACKFVID
EIKASVPIWKKEVYANGEVWKENSEFLERRSELGNAGLQQGGTCCSRKVKVEAKERKSCC
GAKVKVEGELKFLERRSELGNAGLQEGGTCCSRKVKVEAQERKGCCGAKVKVDVE

Transcript Sequence

Transcript ID

VIT_06s0009g02060.t01
Transcript Infomation

cdna chromosome:12X:6:14369781:14371690:1 gene:VIT_06s0009g02060 gene_biotype:protein_coding transcript_biotype:protein_coding description:Molybdopterin synthase catalytic subunit [Source:UniProtKB/TrEMBL;Acc:F6HAG2]
Sequence

CCGCCTCCGCCGGCCACCTACTCCACAAACACCCATCTCCGCCGTGATACCATCACCACT
AGCCGCGGGAACTTTTCAGTTTAACAACACTCCAGCAACATCTAGCCATGGCTGTGCTAG
CTCTGTAATTTCTGCAGAAAGCATAGGATAAGTTTGTTGTCTGAATTACCCAAAGCATTA
CAGTTGAGGAAGATGGCCGATGAGGAGAGAAACTTGGTTGAAATATTAGAAGAGCATAAT
GTGATTGACATTGCCAAGTATATAAATTATGTCAGTGCCCCACAGGCAGGCGCTGTAGCA
ACTTTCTCAGGCACGACTCGTGACACCTTTGATGGTAATACAGTTGTAGAGTTGAGATAC
GAAGCTTATGTTCCAATGGCCATCCGCTGCATCAATGACATTTGTTCATCTGCCCGAGCA
TCCTGGAGCCTCATCTCCATTGCAGTTGCCCACCGCTTGGGCCCAGTTCCAGTGGGGGAA
ACCAGTATCTTCATTGCAATCTCTTCTGTTCACCGGGCTGATGCATTGGACGCTTGTAAG
TTTGTAATTGATGAAATTAAGGCATCAGTTCCGATATGGAAGAAGGAGGTGTATGCAAAT
GGAGAGGTTTGGAAGGAGAACTCTGAGTTTTTGGAGAGGAGGTCAGAGCTTGGTAATGCT
GGGTTGCAGCAGGGAGGTACATGCTGTTCAAGAAAGGTAAAGGTGGAGGCAAAGGAGAGG
AAGAGTTGCTGTGGGGCTAAGGTGAAGGTGGAAGGAGAACTCAAGTTTTTGGAGAGGAGG
TCAGAGCTTGGTAATGCTGGGCTGCAGGAGGGAGGGACATGCTGTTCAAGAAAAGTAAAG
GTGGAGGCACAGGAGAGGAAGGGTTGCTGTGGGGCTAAGGTGAAGGTGGATGTTGAATGA
CCACCTTATGCATCCATGGAGGAGAGCTTTATCAGTAAGAAGATCAAGTTCAATTGCATT
TTTATTCACTCCCTTCTGTTCACTGTTAACAATCAAATGCATTTTAGGGTCTGGTGGAAA
AGCTGTGCCTGTTTTGTTGCATATCATCATCCATTGTTCTTTCAAATAAAATTAACGATA
TTTATATATTATACTACTC