Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01810.t01
CDS Infomation

cds chromosome:12X:6:13866657:13870800:-1 gene:VIT_06s0009g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGGAATTGCTGCAGAAGACCTGCTAAATGTGCCCATGCTTCTTCGACTCACTTTTCT
GTCCAGTCTGATCGTACAAAGCCTCCCAGTAAGGCAAATAAGGATTCAACTTCTTCCAGC
CAGCATACACCTTTTGGAACCTTGAACAAAATTTTGGTATCATCCAAAAGTGATATATCT
GCCTCCAATAGTGTCAAGGACTTTAGCTTCAATGATCTCAAGAATGCCTCCAAGAACTTC
CGCTCAGAAAGCCTTCTTGGTGAGGGAGGATTTGGGTGTGTTTTCAAAGGCTGGCTTGAT
GAGAACACTTTAGCTCCCACCAAACCTGGGACGGGGATGGTAGTGGCCATCAAGAAACTC
AAGACAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCGGAAGTAAACTACTTAGGTCAG
CTTCACCATGAAAATCTCGTGAAACTCATCGGGTATTGCTCAGAGTCTGAGAATAGACTT
CTGGTATATGAGTTTATGTCAAAGGGAAGTTTGGAAAATCATTTATTCAAAAAAGGTGTT
CAACCAATAACTTGGGCTACACGGATGAGTATCGCTATTGATGTTGCACAAGGAATATCC
TTCTTACATAGTTTAGATGCTAACGTAATCTACCGTGATTTAAAAGCTTCCAACATTCTG
CTTGATTCGGATTTTAAAGCAAAGCTTTCAGATTTTGGCTTAGCAAGGGATGGTCCTACT
GGAGATAACACTCATGTTTCAACCAGAGTTGTGGGAACTCGGGGTTATGCTGCCCCTGAA
TATGTTGCAACAGGTCATTTAACCCCAAAGAGTGATGTATATAGCTTTGGGGTAGTCTTG
TTAGAGCTGCTATCAGGTAGAAGAGCAATGGATGATGAGAAGGCTGGGGGTGTTGAAGAA
ACTCTAGTAGACTGGGCAAAACCTTTTCTTAGTGACAACAGGCGAGTTCTGAGAATCATG
GATACTCGGTTGGGTGGTCAGTACTCGAAGAAAGGAGCTCAAGCTGCAGCATCACTTGCA
TTGCAGTGCCTCCACACAGACCCCAAAAACCGGCCACTTATGACAGATGTTCTAGCCGCA
CTGGAGCGACTTCCCACATCAAAGGACATTCCTAGGACCCCATCGCCTAGGGTAGAATAT
CACATTATGAAGCATTCATCAAATCCCGGTCACACTCACAAGGCAACAGCCGGAGCCACA
AACTTGGTATGA

Peptide Sequence

PEP ID

VIT_06s0009g01810.t01
PEP Infomation

pep chromosome:12X:6:13866657:13870800:-1 gene:VIT_06s0009g01810 transcript:VIT_06s0009g01810.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGNCCRRPAKCAHASSTHFSVQSDRTKPPSKANKDSTSSSQHTPFGTLNKILVSSKSDIS
ASNSVKDFSFNDLKNASKNFRSESLLGEGGFGCVFKGWLDENTLAPTKPGTGMVVAIKKL
KTESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSESENRLLVYEFMSKGSLENHLFKKGV
QPITWATRMSIAIDVAQGISFLHSLDANVIYRDLKASNILLDSDFKAKLSDFGLARDGPT
GDNTHVSTRVVGTRGYAAPEYVATGHLTPKSDVYSFGVVLLELLSGRRAMDDEKAGGVEE
TLVDWAKPFLSDNRRVLRIMDTRLGGQYSKKGAQAAASLALQCLHTDPKNRPLMTDVLAA
LERLPTSKDIPRTPSPRVEYHIMKHSSNPGHTHKATAGATNLV

Transcript Sequence

Transcript ID

VIT_06s0009g01810.t01
Transcript Infomation

cdna chromosome:12X:6:13866657:13870800:-1 gene:VIT_06s0009g01810 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGCGCCCCTTTAACTGGGTTGTCTGTTTTCTACAAGACTTACCCATTTCCAAAGAGACT
TGGTGGCTTACACACGGCTTCATCTATGGGGAATTGCTGCAGAAGACCTGCTAAATGTGC
CCATGCTTCTTCGACTCACTTTTCTGTCCAGTCTGATCGTACAAAGCCTCCCAGTAAGGC
AAATAAGGATTCAACTTCTTCCAGCCAGCATACACCTTTTGGAACCTTGAACAAAATTTT
GGTATCATCCAAAAGTGATATATCTGCCTCCAATAGTGTCAAGGACTTTAGCTTCAATGA
TCTCAAGAATGCCTCCAAGAACTTCCGCTCAGAAAGCCTTCTTGGTGAGGGAGGATTTGG
GTGTGTTTTCAAAGGCTGGCTTGATGAGAACACTTTAGCTCCCACCAAACCTGGGACGGG
GATGGTAGTGGCCATCAAGAAACTCAAGACAGAAAGCTTTCAAGGCCACAAGGAATGGCT
TGCGGAAGTAAACTACTTAGGTCAGCTTCACCATGAAAATCTCGTGAAACTCATCGGGTA
TTGCTCAGAGTCTGAGAATAGACTTCTGGTATATGAGTTTATGTCAAAGGGAAGTTTGGA
AAATCATTTATTCAAAAAAGGTGTTCAACCAATAACTTGGGCTACACGGATGAGTATCGC
TATTGATGTTGCACAAGGAATATCCTTCTTACATAGTTTAGATGCTAACGTAATCTACCG
TGATTTAAAAGCTTCCAACATTCTGCTTGATTCGGATTTTAAAGCAAAGCTTTCAGATTT
TGGCTTAGCAAGGGATGGTCCTACTGGAGATAACACTCATGTTTCAACCAGAGTTGTGGG
AACTCGGGGTTATGCTGCCCCTGAATATGTTGCAACAGGTCATTTAACCCCAAAGAGTGA
TGTATATAGCTTTGGGGTAGTCTTGTTAGAGCTGCTATCAGGTAGAAGAGCAATGGATGA
TGAGAAGGCTGGGGGTGTTGAAGAAACTCTAGTAGACTGGGCAAAACCTTTTCTTAGTGA
CAACAGGCGAGTTCTGAGAATCATGGATACTCGGTTGGGTGGTCAGTACTCGAAGAAAGG
AGCTCAAGCTGCAGCATCACTTGCATTGCAGTGCCTCCACACAGACCCCAAAAACCGGCC
ACTTATGACAGATGTTCTAGCCGCACTGGAGCGACTTCCCACATCAAAGGACATTCCTAG
GACCCCATCGCCTAGGGTAGAATATCACATTATGAAGCATTCATCAAATCCCGGTCACAC
TCACAAGGCAACAGCCGGAGCCACAAACTTGGTATGATGGGTGTATTTTGGTTTCCTCAT
TGGTAGATGCATTCAAATAGTTGTAATTGGTACTTAGACACAGAAAAATGTACAAGAGAT
ACTGCACATATTTGGATATGACTGTAAGGTTGTTGTCACCTTTGTAGCAGTTTTGTTCTT
TGTGAAAATTTTGTTGTACTGAGAATCCAGACAGGATTTTCTTAGTAAAATATGAACTCA
GATTCTTACATCATTTTATTTTTTTGAATGTTTTGTGAAGCCTTGCTCC