Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01780.t01
CDS Infomation

cds chromosome:12X:6:13799987:13801712:-1 gene:VIT_06s0009g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTCTTCATTTCTCTTTCTTTCCCTAGCTAATACTGCTACCAAAGACCATGTCTTG
GCTCATCTCAACTTCGTCTTGCTGCTTTTCTGCGTATCCATCTTAGTCATCTTCACCAAA
TTCAAATCCAACACCAGCACCAGCAGCAAGGGAATGCACCTTCCTCCAGGCCCAGCTCCA
TGGCCACTACTCCGAAATCTTCCTGACTTACTCAAGAACAAGCCAGTTTTCCGGTGGATA
CATGGATTCATGAAAGAAATGAACACCGAAATTGCATGTATTCAGTTGGGCAACGTTCAT
GTTATACCGGTGATTTCTCCAGAGATTAGCAGAGAATTTTTGAAGAAACATGACGCAATA
TTTGCGTCCAGGCCTGTTACAATGGCGTCTGAGTATTCAAGCGGTGGCTTCTTGACAATA
GCAGTGGTGCCAAAGGGAACGCAGTGGAAGAAGATGAGAAGGGTTGTTGCTTCTGATGTC
ATTAACGAAACAACATTTAAGTGGCTGCATGACAAGAGAGTGGAAGAAGCCGACAATCTT
GTTCGATTCATTTATAACCAGTGTAAAACCTTCACTAGCCCATCAATTATAAATGTAAGA
AACACAGTCCGTCAATACAGTGGAAACGTCATTAGGAAGATGATCCTCAACACAAGATAC
TTTGGCGAAGGAAAGAAAGATGGAGGACCTGGAATCGAAGAGGAACAACATGTTGAATCC
CTCTTCACTGTACTTGCTCACCTCTATGCATTCTCTTTGTCTGATTACTTCCCATGGATG
AGAGTGCTGGACTTAGATGGGCATGAGAAGACTGTAAGGCAGGCTATGAATACCATTGAC
AAGTACCATGATCCCATCGTGGAGAATAGAGCAAAACAATGGAGGAATGGGGGGAAGAAG
GAGGCTGAGGACCTTCTAGACATTTTCCTTTCAATCAAGGATGCACACGGTGAACCACTG
CTGTCTGTGGCAGAGATCAAAGCCCAATGCACAGAGTTGATGCTTGCTGCAGTGGATAAT
CCATCAAACGCAATAGAGTGGGCAATGGCAGAGATGATCAATCAACCAGAGGTGTTGCGA
AAGGCAGTGGAAGAAATAAATAGAGTGGTTGGAAAAGAGAGACTGGTTCAAGAATCGGAC
TTTGAGCAGCTCAACTATGTCAAGGCCTGTGCAAGGGAAGCATTTCGGCTGCACCCTATT
GCACCCTTCCATCTCCCCCATGTCTCCACTTGTGATGCAGTTGTTGCTGGCTACTTTATT
CCCAAAGGCAGTCATGTCCTCCTCAGCCGTCTGGGCCTGGGCCGGAACGGTAGAATCTGG
GAAGAACCACTAAGGTTCAAACCGGAGAGGCATCTGAGTGAAGGTACAGGGAAAATGGTG
GAGTTGACGGAGCCAGACCTTCGATTCATTTCCTTCGGCACTGGAAGACGTGGGTGCCCT
GGAAAAGCAACGGGGTCTGCCATGACTGTGATGCTGCTAGCACGGCTTCTCCAAGGATTT
ACTTGGAGTGCACCACCGGAACAAAAGGAGATTGACCTCTCAGAATCAAGAAATGACCTC
TCTCTGGAAAAACCACTGCATGCCGTTGCAAAACCTCGTTTGCATGCATCCCTCTACTCA
GCTGCTTACCAATAA

Peptide Sequence

PEP ID

VIT_06s0009g01780.t01
PEP Infomation

pep chromosome:12X:6:13799987:13801712:-1 gene:VIT_06s0009g01780 transcript:VIT_06s0009g01780.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLSSFLFLSLANTATKDHVLAHLNFVLLLFCVSILVIFTKFKSNTSTSSKGMHLPPGPAP
WPLLRNLPDLLKNKPVFRWIHGFMKEMNTEIACIQLGNVHVIPVISPEISREFLKKHDAI
FASRPVTMASEYSSGGFLTIAVVPKGTQWKKMRRVVASDVINETTFKWLHDKRVEEADNL
VRFIYNQCKTFTSPSIINVRNTVRQYSGNVIRKMILNTRYFGEGKKDGGPGIEEEQHVES
LFTVLAHLYAFSLSDYFPWMRVLDLDGHEKTVRQAMNTIDKYHDPIVENRAKQWRNGGKK
EAEDLLDIFLSIKDAHGEPLLSVAEIKAQCTELMLAAVDNPSNAIEWAMAEMINQPEVLR
KAVEEINRVVGKERLVQESDFEQLNYVKACAREAFRLHPIAPFHLPHVSTCDAVVAGYFI
PKGSHVLLSRLGLGRNGRIWEEPLRFKPERHLSEGTGKMVELTEPDLRFISFGTGRRGCP
GKATGSAMTVMLLARLLQGFTWSAPPEQKEIDLSESRNDLSLEKPLHAVAKPRLHASLYS
AAYQ

Transcript Sequence

Transcript ID

VIT_06s0009g01780.t01
Transcript Infomation

cdna chromosome:12X:6:13799987:13801712:-1 gene:VIT_06s0009g01780 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTTTCTTCATTTCTCTTTCTTTCCCTAGCTAATACTGCTACCAAAGACCATGTCTTG
GCTCATCTCAACTTCGTCTTGCTGCTTTTCTGCGTATCCATCTTAGTCATCTTCACCAAA
TTCAAATCCAACACCAGCACCAGCAGCAAGGGAATGCACCTTCCTCCAGGCCCAGCTCCA
TGGCCACTACTCCGAAATCTTCCTGACTTACTCAAGAACAAGCCAGTTTTCCGGTGGATA
CATGGATTCATGAAAGAAATGAACACCGAAATTGCATGTATTCAGTTGGGCAACGTTCAT
GTTATACCGGTGATTTCTCCAGAGATTAGCAGAGAATTTTTGAAGAAACATGACGCAATA
TTTGCGTCCAGGCCTGTTACAATGGCGTCTGAGTATTCAAGCGGTGGCTTCTTGACAATA
GCAGTGGTGCCAAAGGGAACGCAGTGGAAGAAGATGAGAAGGGTTGTTGCTTCTGATGTC
ATTAACGAAACAACATTTAAGTGGCTGCATGACAAGAGAGTGGAAGAAGCCGACAATCTT
GTTCGATTCATTTATAACCAGTGTAAAACCTTCACTAGCCCATCAATTATAAATGTAAGA
AACACAGTCCGTCAATACAGTGGAAACGTCATTAGGAAGATGATCCTCAACACAAGATAC
TTTGGCGAAGGAAAGAAAGATGGAGGACCTGGAATCGAAGAGGAACAACATGTTGAATCC
CTCTTCACTGTACTTGCTCACCTCTATGCATTCTCTTTGTCTGATTACTTCCCATGGATG
AGAGTGCTGGACTTAGATGGGCATGAGAAGACTGTAAGGCAGGCTATGAATACCATTGAC
AAGTACCATGATCCCATCGTGGAGAATAGAGCAAAACAATGGAGGAATGGGGGGAAGAAG
GAGGCTGAGGACCTTCTAGACATTTTCCTTTCAATCAAGGATGCACACGGTGAACCACTG
CTGTCTGTGGCAGAGATCAAAGCCCAATGCACAGAGTTGATGCTTGCTGCAGTGGATAAT
CCATCAAACGCAATAGAGTGGGCAATGGCAGAGATGATCAATCAACCAGAGGTGTTGCGA
AAGGCAGTGGAAGAAATAAATAGAGTGGTTGGAAAAGAGAGACTGGTTCAAGAATCGGAC
TTTGAGCAGCTCAACTATGTCAAGGCCTGTGCAAGGGAAGCATTTCGGCTGCACCCTATT
GCACCCTTCCATCTCCCCCATGTCTCCACTTGTGATGCAGTTGTTGCTGGCTACTTTATT
CCCAAAGGCAGTCATGTCCTCCTCAGCCGTCTGGGCCTGGGCCGGAACGGTAGAATCTGG
GAAGAACCACTAAGGTTCAAACCGGAGAGGCATCTGAGTGAAGGTACAGGGAAAATGGTG
GAGTTGACGGAGCCAGACCTTCGATTCATTTCCTTCGGCACTGGAAGACGTGGGTGCCCT
GGAAAAGCAACGGGGTCTGCCATGACTGTGATGCTGCTAGCACGGCTTCTCCAAGGATTT
ACTTGGAGTGCACCACCGGAACAAAAGGAGATTGACCTCTCAGAATCAAGAAATGACCTC
TCTCTGGAAAAACCACTGCATGCCGTTGCAAAACCTCGTTTGCATGCATCCCTCTACTCA
GCTGCTTACCAATAA