Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01740.t01
CDS Infomation

cds chromosome:12X:6:13743687:13745250:-1 gene:VIT_06s0009g01740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGCTGCTACTCCTCTTTACCTGCAAAACAAACCCCACCACCATCATCATCATCAT
CTATCTTCTCTCTTTTCTTCTTCGCTTCCTTTCTCCATCAAAACAAATCCTTTCTCCACC
TCTAAACCCTCCTCTCTCATCATTTCTTCTATATCTAATCCACCTCTCTCTGGCCGTAAG
CTCCGAGCCGCCGTCATCGGAGGCGGCCCCGCAGGATCCTCTGCGGCCGAGACTCTCGCT
GCCGGCGGCATCGAGACCTTCCTCTTTGAACGCAGCCCCGCCTCCTCCAAGCCCTGCGGC
GGCGCCATCCCCCTCTGCATGCTCGAAGAGTTCTCCATTCCGCCGGAGCTCGTAGACCGG
AGAGTCACCCGCATGAAGATCATCTCCCCCTCCAACCTCACCGTCGACTTCGGCAAAACC
CTCAAGCCCAACGAGTACATCGCCATGCTTCGCCGCGAGGTCCTCGACTCATTCCTCCGC
CGCCGAGCCGAGTCCGCCGGCGCCACCGCAATCACCGCCCTCGTCACCTCCCTCGACCTC
CCCTCCTCCCCGGCATCACCGTACGTCATCCACTACAACGCCGGCGGATCCCGCCACTCC
CTGGCCGTCGACGTGGTGATCGGAGCCGACGGGGCCAACAGCCGTGTCGCGAAATCCATC
AAGGCCGGCGACTACAGCTGTGCTATCGCCTTCCAAGAACGAATCAAACTCCCGGAGGAG
AAAATGGAGTATTACCAAGACCTAGCGGAGATGTACGTAGGAAACGACGTGTCGCCGGAT
TTCTACGCCTGGGTATTCCCGAAATGCGACCATGTGGCAGTGGGCACGGGCACGGTGTGC
TCAAAGCAGAATATTAAGTTGTACCAAAGAGGAATCCGAGAAAGGGTTGAACCCAAGATC
AGCGGAGGAAAAGTGATCAAAGTAGAGGCCCATCCCATACCAGAGCACCCACGCCCTGTC
CGTATCCGAGGCCGCGTGGCCTTAGTGGGGGACGCCGCAGGGTACGTGACAAAGTGCTCG
GGCGAGGGCATATATTTTGCTGCAAAGTCGGGAAAAATGTGCGCAGAGGCCATATTAAAA
GCCTCCGAAGGAGGGTTGAGGATGATAAGCGAGGAGGATTTAAGGAGGGAGTATCTGAAG
GAGTGGGATGGGAAGTACTTGGTGACATACAGGTTGCTGGATTTGTTGCATAGGGTGTTC
TACGGGAGCAATGCGGCGAGGGAGGCGTTGGTGGAGCTGTGTGGGAACGAATATGTGCAG
AGGATGACGTTTGAGAGCTATTTGTACAAGAGGTTGGCTGAGGGGGATGGGTGGGAGGAT
GCTAAGATGGTTTTCAATACATTTGGGAGTTTGATAAGGTGTAAGATTGTGGGGAGAGAC
GTACAGGCTTTGAGGGTGTGA

Peptide Sequence

PEP ID

VIT_06s0009g01740.t01
PEP Infomation

pep chromosome:12X:6:13743687:13745250:-1 gene:VIT_06s0009g01740 transcript:VIT_06s0009g01740.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAATPLYLQNKPHHHHHHHLSSLFSSSLPFSIKTNPFSTSKPSSLIISSISNPPLSGRK
LRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEFSIPPELVDR
RVTRMKIISPSNLTVDFGKTLKPNEYIAMLRREVLDSFLRRRAESAGATAITALVTSLDL
PSSPASPYVIHYNAGGSRHSLAVDVVIGADGANSRVAKSIKAGDYSCAIAFQERIKLPEE
KMEYYQDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKLYQRGIRERVEPKI
SGGKVIKVEAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGEGIYFAAKSGKMCAEAILK
ASEGGLRMISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYGSNAAREALVELCGNEYVQ
RMTFESYLYKRLAEGDGWEDAKMVFNTFGSLIRCKIVGRDVQALRV

Transcript Sequence

Transcript ID

VIT_06s0009g01740.t01
Transcript Infomation

cdna chromosome:12X:6:13743687:13745250:-1 gene:VIT_06s0009g01740 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CATCTTCTTCTTCACCTAAATTCATCAATGGCAGCTGCTACTCCTCTTTACCTGCAAAAC
AAACCCCACCACCATCATCATCATCATCTATCTTCTCTCTTTTCTTCTTCGCTTCCTTTC
TCCATCAAAACAAATCCTTTCTCCACCTCTAAACCCTCCTCTCTCATCATTTCTTCTATA
TCTAATCCACCTCTCTCTGGCCGTAAGCTCCGAGCCGCCGTCATCGGAGGCGGCCCCGCA
GGATCCTCTGCGGCCGAGACTCTCGCTGCCGGCGGCATCGAGACCTTCCTCTTTGAACGC
AGCCCCGCCTCCTCCAAGCCCTGCGGCGGCGCCATCCCCCTCTGCATGCTCGAAGAGTTC
TCCATTCCGCCGGAGCTCGTAGACCGGAGAGTCACCCGCATGAAGATCATCTCCCCCTCC
AACCTCACCGTCGACTTCGGCAAAACCCTCAAGCCCAACGAGTACATCGCCATGCTTCGC
CGCGAGGTCCTCGACTCATTCCTCCGCCGCCGAGCCGAGTCCGCCGGCGCCACCGCAATC
ACCGCCCTCGTCACCTCCCTCGACCTCCCCTCCTCCCCGGCATCACCGTACGTCATCCAC
TACAACGCCGGCGGATCCCGCCACTCCCTGGCCGTCGACGTGGTGATCGGAGCCGACGGG
GCCAACAGCCGTGTCGCGAAATCCATCAAGGCCGGCGACTACAGCTGTGCTATCGCCTTC
CAAGAACGAATCAAACTCCCGGAGGAGAAAATGGAGTATTACCAAGACCTAGCGGAGATG
TACGTAGGAAACGACGTGTCGCCGGATTTCTACGCCTGGGTATTCCCGAAATGCGACCAT
GTGGCAGTGGGCACGGGCACGGTGTGCTCAAAGCAGAATATTAAGTTGTACCAAAGAGGA
ATCCGAGAAAGGGTTGAACCCAAGATCAGCGGAGGAAAAGTGATCAAAGTAGAGGCCCAT
CCCATACCAGAGCACCCACGCCCTGTCCGTATCCGAGGCCGCGTGGCCTTAGTGGGGGAC
GCCGCAGGGTACGTGACAAAGTGCTCGGGCGAGGGCATATATTTTGCTGCAAAGTCGGGA
AAAATGTGCGCAGAGGCCATATTAAAAGCCTCCGAAGGAGGGTTGAGGATGATAAGCGAG
GAGGATTTAAGGAGGGAGTATCTGAAGGAGTGGGATGGGAAGTACTTGGTGACATACAGG
TTGCTGGATTTGTTGCATAGGGTGTTCTACGGGAGCAATGCGGCGAGGGAGGCGTTGGTG
GAGCTGTGTGGGAACGAATATGTGCAGAGGATGACGTTTGAGAGCTATTTGTACAAGAGG
TTGGCTGAGGGGGATGGGTGGGAGGATGCTAAGATGGTTTTCAATACATTTGGGAGTTTG
ATAAGGTGTAAGATTGTGGGGAGAGACGTACAGGCTTTGAGGGTGTGAGTTGTGAGGACT
TTGCTTGTATTGGGGAGATGTGGTCTAATATATGAGATAATTTGAAGTAGCTTTGTGTTG
GAAGGCTTGGGAGTTTGATTGTTAGTTTGTTAGTTTGTTAGTTTGGGGAGATGTAGGCTG
CCAC