Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01260.t01
CDS Infomation

cds chromosome:12X:6:12931174:12934461:1 gene:VIT_06s0009g01260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAATTTCTCTTTTCTTCAACTTGTTTACATAGTGTATCTTGGATCCCTTCGTGAA
GGGGAATTCTCACCATTGTCTCAACACCTTAGCATTCTTGACACCGTTCTTGATGGAAGT
TCTTCAAAGGACTCCTTAGTAAGAAGCTATAAAAGGAGTTTCAATGGATTCGCAGCTCAT
CTCACGGACAAACAAATAGAAAAAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCA
AATAGACTTCTCCAACTTCACACAACCAGATCTTGGGACTTCATGGGATTTTCTGAAACC
GTTAAACGGAATCCCACGGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATC
TGGCCTGAATTACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAA
GGTGTTTGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAGCA
TACAATTCAATTGATAAAAATGATGATTCTGCAAGGGACACTGTCGGTCATGGAACCCAC
ACAGCCTCCACAGCAGCTGGCAACATAGTAGAGGATGCGAGCTTTTTTGGGGTGGCATCA
GGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCCGTGTACAAAGTTTGTACTGCA
GATGGATGCACCATTGCAGATATCTTGGCTGGCTTCGATGATGCCATTTCTGATGGGGTT
GACATCATTACTGTATCATTAGGATCCGTTGCTGGAGCCTTTTTTTTGGATAAGGACCCC
ATAGCAATTGGTTCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGA
AATAATGGTCCATCACCAGGTTCAGTCCTAAGCATCGCTCCATGGATGGTCAGTGTAGCT
GCAAGCACCACAGACCGTGAAATTATTACCAAGGTTGTTCTTGGGGATGGAAAAATAATA
AATGGTCATTCAATCAATTCTTTTGTGTTGAATGGAACCAAGTTTCCCCTTGTAGATGGG
AAAAAGGCTGGTTTAACTAATAATAGTGATTGTGTTACTTATCCTACTCTGGATTGTGAA
ATAGACTGTCTAGTGGAAAGCAAAACAACCGGAAATATTTTACTGTGTAGAGGCCCTGGG
CTAGATGTGCCTCTAAAGTTTGGGGCCGTTGGCATAATCAGACCAGATTTAGGTCGTTCT
ATATACCCGTTGCCAGCATCAGATTTAGAGGAACAAGAATTTGCAATGGTCGAGGCCTAC
ATCAACTCCACCAAAAAACCAGAAGCGGATATATTGAGAAGTGATTCCATCAAAAATGTT
TCTGCTCCTATGCTAGCTTCATTTTCAGGACGAGGGCCAAGCAGTCTCCTAGCTGAGATT
ATAAAGCCAGATATAAGTGCTCCCGGAGTAGATATCTTGGCGGCATTTTCCCCAGTTGCT
CCAATTACAGAGTCCCTGGATGACAAAAGGAGAGCTAAGTACAGTATAATATCGGGAACA
TCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGAC
TGGTCTCCTTCCGCCATCCGATCTGCCCTTATGACTACTGCCTGGCCCATGAATGCTACT
GCAAATCCAGCTGCTGAATTTGGTTACGGATCTGGGCATATTAATCCAGTGAAAGCCATA
AATCCTGGTCTGGTTTATGAAGCCTTTAAAGATGACTACATAAAGATGATGTGCGGACTA
GGCTTTGACGCAGAGAAGGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACA
GGTGTTACCCAAGGCGCTGTAAGGGATCTCAACTATCCTTCCATGGCATCTACAGCCGAC
CAACACAAGCCTTTTAACATTAGATTTCCAAGAACAGTTACCAATGTTGGCCAGGCAAAT
TCCACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAAC
GTTCTCTCCTTCACATCATTAAATGAGAAAAAAACTTTTGTGGTAACAGTTTCAGGAGAA
GCATTGGATAAACAACCCAACGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGT
GTGAGGAGTCCCATTTTTATCTATCAACTTCCCTCAACCTGA

Peptide Sequence

PEP ID

VIT_06s0009g01260.t01
PEP Infomation

pep chromosome:12X:6:12931174:12934461:1 gene:VIT_06s0009g01260 transcript:VIT_06s0009g01260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MANFSFLQLVYIVYLGSLREGEFSPLSQHLSILDTVLDGSSSKDSLVRSYKRSFNGFAAH
LTDKQIEKVASMEGVVSIFPNRLLQLHTTRSWDFMGFSETVKRNPTVESDTIIGVIDSGI
WPELQSFSDEGFSSIPKKWKGVCQGGKNFTCNKKVIGARAYNSIDKNDDSARDTVGHGTH
TASTAAGNIVEDASFFGVASGNARGGVPSARIAVYKVCTADGCTIADILAGFDDAISDGV
DIITVSLGSVAGAFFLDKDPIAIGSFHAMVKGILTLNSAGNNGPSPGSVLSIAPWMVSVA
ASTTDREIITKVVLGDGKIINGHSINSFVLNGTKFPLVDGKKAGLTNNSDCVTYPTLDCE
IDCLVESKTTGNILLCRGPGLDVPLKFGAVGIIRPDLGRSIYPLPASDLEEQEFAMVEAY
INSTKKPEADILRSDSIKNVSAPMLASFSGRGPSSLLAEIIKPDISAPGVDILAAFSPVA
PITESLDDKRRAKYSIISGTSMSCPHAAGAAAYVKTFHPDWSPSAIRSALMTTAWPMNAT
ANPAAEFGYGSGHINPVKAINPGLVYEAFKDDYIKMMCGLGFDAEKVRLISGDNTTTCTT
GVTQGAVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQVNPN
VLSFTSLNEKKTFVVTVSGEALDKQPNVSASLVWTDGTHSVRSPIFIYQLPST

Transcript Sequence

Transcript ID

VIT_06s0009g01260.t01
Transcript Infomation

cdna chromosome:12X:6:12931174:12934461:1 gene:VIT_06s0009g01260 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTAATTTCTCTTTTCTTCAACTTGTTTACATAGTGTATCTTGGATCCCTTCGTGAA
GGGGAATTCTCACCATTGTCTCAACACCTTAGCATTCTTGACACCGTTCTTGATGGAAGT
TCTTCAAAGGACTCCTTAGTAAGAAGCTATAAAAGGAGTTTCAATGGATTCGCAGCTCAT
CTCACGGACAAACAAATAGAAAAAGTGGCTAGCATGGAGGGAGTGGTGTCTATTTTCCCA
AATAGACTTCTCCAACTTCACACAACCAGATCTTGGGACTTCATGGGATTTTCTGAAACC
GTTAAACGGAATCCCACGGTTGAGAGTGATACTATTATAGGTGTTATTGACTCTGGAATC
TGGCCTGAATTACAAAGCTTTAGTGATGAAGGTTTTAGTTCAATTCCAAAAAAATGGAAA
GGTGTTTGTCAAGGCGGCAAAAATTTCACTTGCAACAAGAAGGTAATTGGAGCTCGAGCA
TACAATTCAATTGATAAAAATGATGATTCTGCAAGGGACACTGTCGGTCATGGAACCCAC
ACAGCCTCCACAGCAGCTGGCAACATAGTAGAGGATGCGAGCTTTTTTGGGGTGGCATCA
GGAAATGCAAGAGGAGGGGTTCCTTCTGCAAGAATAGCCGTGTACAAAGTTTGTACTGCA
GATGGATGCACCATTGCAGATATCTTGGCTGGCTTCGATGATGCCATTTCTGATGGGGTT
GACATCATTACTGTATCATTAGGATCCGTTGCTGGAGCCTTTTTTTTGGATAAGGACCCC
ATAGCAATTGGTTCTTTTCATGCTATGGTGAAAGGTATTTTAACATTGAATTCTGCAGGA
AATAATGGTCCATCACCAGGTTCAGTCCTAAGCATCGCTCCATGGATGGTCAGTGTAGCT
GCAAGCACCACAGACCGTGAAATTATTACCAAGGTTGTTCTTGGGGATGGAAAAATAATA
AATGGTCATTCAATCAATTCTTTTGTGTTGAATGGAACCAAGTTTCCCCTTGTAGATGGG
AAAAAGGCTGGTTTAACTAATAATAGTGATTGTGTTACTTATCCTACTCTGGATTGTGAA
ATAGACTGTCTAGTGGAAAGCAAAACAACCGGAAATATTTTACTGTGTAGAGGCCCTGGG
CTAGATGTGCCTCTAAAGTTTGGGGCCGTTGGCATAATCAGACCAGATTTAGGTCGTTCT
ATATACCCGTTGCCAGCATCAGATTTAGAGGAACAAGAATTTGCAATGGTCGAGGCCTAC
ATCAACTCCACCAAAAAACCAGAAGCGGATATATTGAGAAGTGATTCCATCAAAAATGTT
TCTGCTCCTATGCTAGCTTCATTTTCAGGACGAGGGCCAAGCAGTCTCCTAGCTGAGATT
ATAAAGCCAGATATAAGTGCTCCCGGAGTAGATATCTTGGCGGCATTTTCCCCAGTTGCT
CCAATTACAGAGTCCCTGGATGACAAAAGGAGAGCTAAGTACAGTATAATATCGGGAACA
TCCATGTCTTGCCCCCATGCTGCTGGAGCTGCTGCTTATGTTAAGACTTTCCACCCAGAC
TGGTCTCCTTCCGCCATCCGATCTGCCCTTATGACTACTGCCTGGCCCATGAATGCTACT
GCAAATCCAGCTGCTGAATTTGGTTACGGATCTGGGCATATTAATCCAGTGAAAGCCATA
AATCCTGGTCTGGTTTATGAAGCCTTTAAAGATGACTACATAAAGATGATGTGCGGACTA
GGCTTTGACGCAGAGAAGGTAAGGCTCATATCAGGAGACAACACTACCACTTGTACTACA
GGTGTTACCCAAGGCGCTGTAAGGGATCTCAACTATCCTTCCATGGCATCTACAGCCGAC
CAACACAAGCCTTTTAACATTAGATTTCCAAGAACAGTTACCAATGTTGGCCAGGCAAAT
TCCACTTACCAAGCAAAGATCACTGCAGATCCTCTCATGAAAGTCCAAGTAAATCCTAAC
GTTCTCTCCTTCACATCATTAAATGAGAAAAAAACTTTTGTGGTAACAGTTTCAGGAGAA
GCATTGGATAAACAACCCAACGTATCTGCATCGCTGGTGTGGACCGATGGCACTCATAGT
GTGAGGAGTCCCATTTTTATCTATCAACTTCCCTCAACCTGA