Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01180.t01
CDS Infomation

cds chromosome:12X:6:12767560:12771516:-1 gene:VIT_06s0009g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACCCTGAAGTGCATTCGTATCTACTGCCTCTTTCGTCACGCACTATCATTGAAGCGA
TTTAGCCGCTTCTCAAACCCTAGCTCCACAAGAAACCCTAACCCTAATTTCTCCATGGCT
AAGAAGCGAAAGCTCCGTTCTTCCGAGCCCGAATCCTCCAAAGCCCCTGAGCAAGAGGAG
CAGCCACAGCCCACGCAGGAAGAAGATGATCAGACCAAATTTGAACCCATCCAGGAAGAC
GAAGATCAGCCACAACACATGGCTGAAGACGAACCCAAACACGAAGCCCAAGGAGAAGAA
GAAGAGGAGGAGGAGGGGGAAGGGGAAGAGGAAGAGGAAGAAGAAGGTGACCAGGAAGGA
GATGTGGACGCGTCGAATGAAGCCGTCGCGGATGAGGTGCCAGCGGATGCGAACGGCGAT
GGGGTTGAGGAGGATGAAGGGGATGTGGAGGATGAGGAGATTGAGAAGCTTCTGGAGCCC
TTCTCGAAAGAGCAGCTGCTGGCTTTGCTTCGGGAGGCAGTGGAAAAGTACCCGGACTTC
GTTGATAGCGTACGAAGACTCGCCGACGCCGACCCGGCTCACCGAAAAATCTTCGTCCAC
GGCCTGGGATGGGACACGACCGCAGAAACCCTAACCTCTGTGTTTGGCAAGTATGGTGAG
ATTGAAGACTGCAAGGCCGTATCGGACAAGATCTCCGGAAAATCCAAGGGATACGCCTTT
ATTCTGTTCAAGCACCGGAGCGGCGCTCGCAAGGCGCTGAAGCAGCCGCAGAAGAAGATT
GGAAATCGGATGACCTCGTGCCAGCTAGCCTCTGCCGGCCCCGTTCCAGCGCCGCCACCG
GTGGTACCTCCGGTGTCTGAGTATACTCAAAGAAAGATTTTTGTGAGCAATGTTTCTTCG
GAGATCGATCCGCAGAAGCTACTAGAGTTCTTTGCGAAGTTTGGGGAAATCGAGGAGGGT
CCATTAGGCTTAGATAAGTCGACTGGGAAGCCCAAGGGTTTCGCTTTGTTCGTTTACAAG
TCGATTGAGAGCTCGAGGAGGGCATTGGAGGAGCCACACAAAATTTTTGAGGGTCACACA
CTGCATTGCCAGAAGGCAATTGATGGGCCGAAGCCAAATAAGCCTTTCCACCATCACCAC
CACCAACACCAACCACATTACCCTTCAAGGAAGGACAAATCAAAATACTCAGCCAACGCC
GCTGGCCCAGGGCACCTGATGGCACCATCAGGGCCATCAATGACTTTGAACCCAGGTGTT
GCACCAGCTTTGAACCCGGCTCTTGGGCAAGCATTGACTGCATTGCTTGCTTCACAAGGG
GCAGGACTGGGGCTCACCAATCTGCTTGGAGGTCTTGGTGGTGCACCAGTGAACCAGGCT
ATGCCGCCTGCGGCACATGGAATGCAGGGAATGCAGGGTGGGTATGGAAATCAGGCCGGG
AATGCAGGGCGGGTACCAAAACCCACAAATGGGGCAGGCCAGTGGAGGCAGGCCTCAGCA
GGGTGGGGCACCGTATATGGGTCACTAGATTCCTCCATAGATGCATCAATCTTTTAG

Peptide Sequence

PEP ID

VIT_06s0009g01180.t01
PEP Infomation

pep chromosome:12X:6:12767560:12771516:-1 gene:VIT_06s0009g01180 transcript:VIT_06s0009g01180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTLKCIRIYCLFRHALSLKRFSRFSNPSSTRNPNPNFSMAKKRKLRSSEPESSKAPEQEE
QPQPTQEEDDQTKFEPIQEDEDQPQHMAEDEPKHEAQGEEEEEEEGEGEEEEEEEGDQEG
DVDASNEAVADEVPADANGDGVEEDEGDVEDEEIEKLLEPFSKEQLLALLREAVEKYPDF
VDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAF
ILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVPAPPPVVPPVSEYTQRKIFVSNVSS
EIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEPHKIFEGHT
LHCQKAIDGPKPNKPFHHHHHQHQPHYPSRKDKSKYSANAAGPGHLMAPSGPSMTLNPGV
APALNPALGQALTALLASQGAGLGLTNLLGGLGGAPVNQAMPPAAHGMQGMQGGYGNQAG
NAGRVPKPTNGAGQWRQASAGWGTVYGSLDSSIDASIF

Transcript Sequence

Transcript ID

VIT_06s0009g01180.t01
Transcript Infomation

cdna chromosome:12X:6:12767560:12771516:-1 gene:VIT_06s0009g01180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTAATATCAGAACAAAGAAGTGAAGGAAAATGCTGGCCGTTGATTAAAGTCACGTGTG
ATGGTTGTCCGAGATCTCCTAAAATATAATGACCCTGAAGTGCATTCGTATCTACTGCCT
CTTTCGTCACGCACTATCATTGAAGCGATTTAGCCGCTTCTCAAACCCTAGCTCCACAAG
AAACCCTAACCCTAATTTCTCCATGGCTAAGAAGCGAAAGCTCCGTTCTTCCGAGCCCGA
ATCCTCCAAAGCCCCTGAGCAAGAGGAGCAGCCACAGCCCACGCAGGAAGAAGATGATCA
GACCAAATTTGAACCCATCCAGGAAGACGAAGATCAGCCACAACACATGGCTGAAGACGA
ACCCAAACACGAAGCCCAAGGAGAAGAAGAAGAGGAGGAGGAGGGGGAAGGGGAAGAGGA
AGAGGAAGAAGAAGGTGACCAGGAAGGAGATGTGGACGCGTCGAATGAAGCCGTCGCGGA
TGAGGTGCCAGCGGATGCGAACGGCGATGGGGTTGAGGAGGATGAAGGGGATGTGGAGGA
TGAGGAGATTGAGAAGCTTCTGGAGCCCTTCTCGAAAGAGCAGCTGCTGGCTTTGCTTCG
GGAGGCAGTGGAAAAGTACCCGGACTTCGTTGATAGCGTACGAAGACTCGCCGACGCCGA
CCCGGCTCACCGAAAAATCTTCGTCCACGGCCTGGGATGGGACACGACCGCAGAAACCCT
AACCTCTGTGTTTGGCAAGTATGGTGAGATTGAAGACTGCAAGGCCGTATCGGACAAGAT
CTCCGGAAAATCCAAGGGATACGCCTTTATTCTGTTCAAGCACCGGAGCGGCGCTCGCAA
GGCGCTGAAGCAGCCGCAGAAGAAGATTGGAAATCGGATGACCTCGTGCCAGCTAGCCTC
TGCCGGCCCCGTTCCAGCGCCGCCACCGGTGGTACCTCCGGTGTCTGAGTATACTCAAAG
AAAGATTTTTGTGAGCAATGTTTCTTCGGAGATCGATCCGCAGAAGCTACTAGAGTTCTT
TGCGAAGTTTGGGGAAATCGAGGAGGGTCCATTAGGCTTAGATAAGTCGACTGGGAAGCC
CAAGGGTTTCGCTTTGTTCGTTTACAAGTCGATTGAGAGCTCGAGGAGGGCATTGGAGGA
GCCACACAAAATTTTTGAGGGTCACACACTGCATTGCCAGAAGGCAATTGATGGGCCGAA
GCCAAATAAGCCTTTCCACCATCACCACCACCAACACCAACCACATTACCCTTCAAGGAA
GGACAAATCAAAATACTCAGCCAACGCCGCTGGCCCAGGGCACCTGATGGCACCATCAGG
GCCATCAATGACTTTGAACCCAGGTGTTGCACCAGCTTTGAACCCGGCTCTTGGGCAAGC
ATTGACTGCATTGCTTGCTTCACAAGGGGCAGGACTGGGGCTCACCAATCTGCTTGGAGG
TCTTGGTGGTGCACCAGTGAACCAGGCTATGCCGCCTGCGGCACATGGAATGCAGGGAAT
GCAGGGTGGGTATGGAAATCAGGCCGGGAATGCAGGGCGGGTACCAAAACCCACAAATGG
GGCAGGCCAGTGGAGGCAGGCCTCAGCAGGGTGGGGCACCGTATATGGGTCACTAGATTC
CTCCATAGATGCATCAATCTTTTAGTTTTGGACTCTGGTGATTCTTCTCAAGTTCCAGGC
ACTCTTGCAAATGACGTCTTTTATGTGACGAAAAGTTACTGTTTCCCCTACTATAAAGAC
CAGAATCTTAAACCTGTATTTTTTTTTCATTTAAGTACTTTTCCCCCTTCGCAAGTTTTC
AAAACAATGTAGTATTTTGGTTCCGATCTTTTGTTTCTTCAAATGCGATGGGGAGCAGCA
AGAGTTTTCAGGCAGAGAACACTATATCTTGCCAGAATTTTAAGTGGTTTAATCAACAAT
GTTTTTCTTATATTCCTGTTCCTTGCTCTGACTAATG