Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g01000.t01
CDS Infomation

cds chromosome:12X:6:12274419:12283275:-1 gene:VIT_06s0009g01000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCTCCAGGTATGGAAGAGAGCAACAAGTCCGAGTGCCATTTGACTTCTGCTGCG
GCTTTTGTGGAGGGTGGAATTCAAGAGGCCTGTGATGATGCTTGCAGCATATGCTTGGAA
GCCTTCTGTGACAGTGATCCCTCGACGGTGACTAGTTGCAAGCATGAATTTCATCTTCAG
TGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTGCCCCATGTGTTGGCAGCCTATCAGC
CTGAAGGATCCAACCAGCCAGGAATTGCTTGAGGCAGTGGAACGGGAGAGAACATTTCGG
TTTAATCCATCTAGAAATGCCACAATATTTCATCATCCAACTTTGGGGGATTTCGAATTA
CAACATTTACCTGTGGGTGCGAATGATGCTGAACTTGAAGAGCGTATAATCCAGCACTTA
GCTGCTGCAGCTGCAATGGGCAGAGCACGCCACATTGCTAGAAGGGAAGGCCAGAGAACT
AGGTCATCAGCTCAAGGTCGTCCACAATTTCTGGTGTTCTCAGCTCATCCTAGCACGCCT
CAGGCTGGTCCTGCTTCTTCCTCTCCAGCTCAGAGAGGGGAAGATGAACCAGCTCCTGCA
ATTACTGCTGCTATGCCCTCTTCCCTTCCTACAGCTGTGGGGGAAGAATCTTCTCGGCTT
ACTACATCACAACTTTCTTCCCAAGCCGAGGAAATTACTGCCTCAGCATCTGGGTCAATT
ATTCATACTACAAATCAGCATGGAACTTCCTCAAACAATAGGAGGTCTCCCGGTCAATCT
CTTCCAAGTGGTCAAGATAAAGCAGGACCATCAGAATTTCAATCATTTTCAGAAACCCTA
AAATCTCGATTTAATGCAGTGTCAATGAGGTACAAAGAGTCAATTTCGAAGAGTACAAGG
GGATGGAAGGAGAGATTGTTCTCTCGCAATACTTCCATGGCAGATATTGGTTCTGATGTT
AGAAGAGAGGTTAATGCAGGAATTGCAACTGTATCACGCATGATGGAGCATCTTGAAACT
CGTGACAATAGCAGAACCACCCCTTCTTCTGTATCAGATAGTTCAGAGGATACCTCATCT
CCATCACTGGGCGACCAGAGAATGGCTGAAACTAGTGCTCATAATCCTTTGGGTGACACT
AATGTACAAGCTTCATGTGCTGCAAGTTCTGGCACTAATTAA

Peptide Sequence

PEP ID

VIT_06s0009g01000.t01
PEP Infomation

pep chromosome:12X:6:12274419:12283275:-1 gene:VIT_06s0009g01000 transcript:VIT_06s0009g01000.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEAPGMEESNKSECHLTSAAAFVEGGIQEACDDACSICLEAFCDSDPSTVTSCKHEFHLQ
CILEWCQRSSQCPMCWQPISLKDPTSQELLEAVERERTFRFNPSRNATIFHHPTLGDFEL
QHLPVGANDAELEERIIQHLAAAAAMGRARHIARREGQRTRSSAQGRPQFLVFSAHPSTP
QAGPASSSPAQRGEDEPAPAITAAMPSSLPTAVGEESSRLTTSQLSSQAEEITASASGSI
IHTTNQHGTSSNNRRSPGQSLPSGQDKAGPSEFQSFSETLKSRFNAVSMRYKESISKSTR
GWKERLFSRNTSMADIGSDVRREVNAGIATVSRMMEHLETRDNSRTTPSSVSDSSEDTSS
PSLGDQRMAETSAHNPLGDTNVQASCAASSGTN

Transcript Sequence

Transcript ID

VIT_06s0009g01000.t01
Transcript Infomation

cdna chromosome:12X:6:12274419:12283275:-1 gene:VIT_06s0009g01000 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTAGACGAGTCTTCTCGCTCGCGCTCTCTCTCTCAATAATCTCTGCTGTCTAGGGTTTTC
GATTACCTCTTTTTCCATATCCCTCCTCGATCTACGCAAATTCCTTACAAGTAGATCGTT
TCCTTCATCGCTTATCGTATCTTTCATGGAGGCTCCAGGTATGGAAGAGAGCAACAAGTC
CGAGTGCCATTTGACTTCTGCTGCGGCTTTTGTGGAGGGTGGAATTCAAGAGGCCTGTGA
TGATGCTTGCAGCATATGCTTGGAAGCCTTCTGTGACAGTGATCCCTCGACGGTGACTAG
TTGCAAGCATGAATTTCATCTTCAGTGCATTCTTGAATGGTGTCAGAGAAGCTCCCAGTG
CCCCATGTGTTGGCAGCCTATCAGCCTGAAGGATCCAACCAGCCAGGAATTGCTTGAGGC
AGTGGAACGGGAGAGAACATTTCGGTTTAATCCATCTAGAAATGCCACAATATTTCATCA
TCCAACTTTGGGGGATTTCGAATTACAACATTTACCTGTGGGTGCGAATGATGCTGAACT
TGAAGAGCGTATAATCCAGCACTTAGCTGCTGCAGCTGCAATGGGCAGAGCACGCCACAT
TGCTAGAAGGGAAGGCCAGAGAACTAGGTCATCAGCTCAAGGTCGTCCACAATTTCTGGT
GTTCTCAGCTCATCCTAGCACGCCTCAGGCTGGTCCTGCTTCTTCCTCTCCAGCTCAGAG
AGGGGAAGATGAACCAGCTCCTGCAATTACTGCTGCTATGCCCTCTTCCCTTCCTACAGC
TGTGGGGGAAGAATCTTCTCGGCTTACTACATCACAACTTTCTTCCCAAGCCGAGGAAAT
TACTGCCTCAGCATCTGGGTCAATTATTCATACTACAAATCAGCATGGAACTTCCTCAAA
CAATAGGAGGTCTCCCGGTCAATCTCTTCCAAGTGGTCAAGATAAAGCAGGACCATCAGA
ATTTCAATCATTTTCAGAAACCCTAAAATCTCGATTTAATGCAGTGTCAATGAGGTACAA
AGAGTCAATTTCGAAGAGTACAAGGGGATGGAAGGAGAGATTGTTCTCTCGCAATACTTC
CATGGCAGATATTGGTTCTGATGTTAGAAGAGAGGTTAATGCAGGAATTGCAACTGTATC
ACGCATGATGGAGCATCTTGAAACTCGTGACAATAGCAGAACCACCCCTTCTTCTGTATC
AGATAGTTCAGAGGATACCTCATCTCCATCACTGGGCGACCAGAGAATGGCTGAAACTAG
TGCTCATAATCCTTTGGGTGACACTAATGTACAAGCTTCATGTGCTGCAAGTTCTGGCAC
TAATTAAGTATATTCCAGTAATGACATCAATTCAATGCATTTCATGAAGGTGGGGAACTC
CCTTTTCAGATATGAGAGATGCTGTGGATGTAATGCTATGTCTCCCTCTTCAGACCAATA
GATATTTTTATATCATATGGAAAGAGCGTTAGTAAATGTGATCTGATTTGAGAATAAAGA
ATTGGAGAGACAATGAGCTCTTTTCTTTGGACATGGAAACCAGTATATATATGATTGTAA
ATTTGATTAAATATTGAAACCTACTTTTGGATATATTTCAAAGAATCGTGCATGCTTGCT
GCACTGGTTTTAACAATGTTGCAAATGTTTTTGAACCATACTGTC