Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g00850.t01
CDS Infomation

cds chromosome:12X:6:11840584:11853396:-1 gene:VIT_06s0009g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCCCTGGTCGGAGGTTCCGGCAGCAAAAGATGATCGGAACTTGCTGCAGAAGGCG
GAGATCAAGTTCCTGAACCAGGTTCAGGGGCCGGAGAGCGTAGCCTTCGATCCTCTCGGC
CGTGGACCCTACACCGGCGTGGCGGACGGCCGGATTCTCTTCTGGAACGGCGAGGCTTGG
TCCGATTTCGCCTATACCTCTCCCAACAGGTCAGAACTATGTGATCCAAAGCCCTCGCCT
CTGAGTTACCTGAAGAATGAGCACATTTGCGGCAGGCCTTTGGGACTCCGATTTAATAAG
AGAACTGGTGATTTATATATCGCAGATTCATATCTTGGATTAATGAAGGTGGGGCCAGAA
GGTGGATTGGCAACATCACTAGTGACTGAGGCAGATGGGGTGCCATTGAGATTCACAAAT
GATCTGGATATTGATGATGCTGGGAATATTTATTTTACAGATAGCAGTAGCAAATACCAA
AGGAGAAACTTCATGCAGTTGGTTTTCTCTTCAGAGGATAGTGGGAGACTCCTGAAATAT
GATCCTCTTACGAAGGAAACCACTGTCCTCTTGCGGGGACTCCAGTTCCCTAATGGTGTA
TCTCTGAGCAAGGATGGTTCTTTCTTGGTCTTATGTGAAGGGTCTCCTGGCAGACTGGTA
AAGTATTGGTTGAAGGGTGACAAAGCTGGAACCTCAGAAGTTTTTGCCATCCTACCTGGA
TATCCTGATAATGTGAGAACCAATGAAAAGGGTGAATTTTGGGTGGCAATCCACTGCCGC
CGGACCATGTACAGTTATCTATGTGGGCTATACCCTAAACTTAGGATGTTCTTGTTGAAG
CTCCCGATTCCAACAAGGTACCAGTACCTGCTTCACATTGGGGGCCGGCTTCATGCGGTG
GTTGTCAAGTACAGCCCCGAAGGTAAGCTTGTGAAAATATTAGAGGACAGTGAGGGGAAG
GTTGTTAGAGCAGTTAGCGAGGTGGAGGAGAGGGAGGGGAAGCTGTGGATGGGGAGTGTG
TTGATGCCCTTTGTCGCGGTTTATCAGTTAGAATGA

Peptide Sequence

PEP ID

VIT_06s0009g00850.t01
PEP Infomation

pep chromosome:12X:6:11840584:11853396:-1 gene:VIT_06s0009g00850 transcript:VIT_06s0009g00850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPPWSEVPAAKDDRNLLQKAEIKFLNQVQGPESVAFDPLGRGPYTGVADGRILFWNGEAW
SDFAYTSPNRSELCDPKPSPLSYLKNEHICGRPLGLRFNKRTGDLYIADSYLGLMKVGPE
GGLATSLVTEADGVPLRFTNDLDIDDAGNIYFTDSSSKYQRRNFMQLVFSSEDSGRLLKY
DPLTKETTVLLRGLQFPNGVSLSKDGSFLVLCEGSPGRLVKYWLKGDKAGTSEVFAILPG
YPDNVRTNEKGEFWVAIHCRRTMYSYLCGLYPKLRMFLLKLPIPTRYQYLLHIGGRLHAV
VVKYSPEGKLVKILEDSEGKVVRAVSEVEEREGKLWMGSVLMPFVAVYQLE

Transcript Sequence

Transcript ID

VIT_06s0009g00850.t01
Transcript Infomation

cdna chromosome:12X:6:11840584:11853396:-1 gene:VIT_06s0009g00850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGCACTTCTCACAACAAGGACAAAACAAACCCCTCTATTTCCGGCCATGACGCCGGGCGG
ACTTCTCGCCGCCCTCTTCCTCCTCCTGGCTCTGTACTGCGGCATCGACCCTCTCAAACA
CAGTTCTATCGCCAATTTCCCTGAATTCGAAGCTCACTTGGTGGAGATGCCTCCCTGGTC
GGAGGTTCCGGCAGCAAAAGATGATCGGAACTTGCTGCAGAAGGCGGAGATCAAGTTCCT
GAACCAGGTTCAGGGGCCGGAGAGCGTAGCCTTCGATCCTCTCGGCCGTGGACCCTACAC
CGGCGTGGCGGACGGCCGGATTCTCTTCTGGAACGGCGAGGCTTGGTCCGATTTCGCCTA
TACCTCTCCCAACAGGTCAGAACTATGTGATCCAAAGCCCTCGCCTCTGAGTTACCTGAA
GAATGAGCACATTTGCGGCAGGCCTTTGGGACTCCGATTTAATAAGAGAACTGGTGATTT
ATATATCGCAGATTCATATCTTGGATTAATGAAGGTGGGGCCAGAAGGTGGATTGGCAAC
ATCACTAGTGACTGAGGCAGATGGGGTGCCATTGAGATTCACAAATGATCTGGATATTGA
TGATGCTGGGAATATTTATTTTACAGATAGCAGTAGCAAATACCAAAGGAGAAACTTCAT
GCAGTTGGTTTTCTCTTCAGAGGATAGTGGGAGACTCCTGAAATATGATCCTCTTACGAA
GGAAACCACTGTCCTCTTGCGGGGACTCCAGTTCCCTAATGGTGTATCTCTGAGCAAGGA
TGGTTCTTTCTTGGTCTTATGTGAAGGGTCTCCTGGCAGACTGGTAAAGTATTGGTTGAA
GGGTGACAAAGCTGGAACCTCAGAAGTTTTTGCCATCCTACCTGGATATCCTGATAATGT
GAGAACCAATGAAAAGGGTGAATTTTGGGTGGCAATCCACTGCCGCCGGACCATGTACAG
TTATCTATGTGGGCTATACCCTAAACTTAGGATGTTCTTGTTGAAGCTCCCGATTCCAAC
AAGGTACCAGTACCTGCTTCACATTGGGGGCCGGCTTCATGCGGTGGTTGTCAAGTACAG
CCCCGAAGGTAAGCTTGTGAAAATATTAGAGGACAGTGAGGGGAAGGTTGTTAGAGCAGT
TAGCGAGGTGGAGGAGAGGGAGGGGAAGCTGTGGATGGGGAGTGTGTTGATGCCCTTTGT
CGCGGTTTATCAGTTAGAATGAGATCAAAGAAGCGACCGTTTTCTGGTGTAATGCCTCTT
GTAAGAGCTTATTTTTTACATGAGGAACCATGGGGTTGGTATATATGTTTTAAGTTGCTG
CCTTTGTAACGCTCAGACTAATTTAAAAACATTTAGTTTCTGTTGGTTAATAGCTGAGAA
TTTGATTTGGGTGTTG