Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g00650.t01
CDS Infomation

cds chromosome:12X:6:11385481:11387102:1 gene:VIT_06s0009g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCCTTCCCGCCTACACAGCTACCACACCTTCATCCCTTGTCACGCACCCAAACTCA
AGCCCAAACTCCAAACCAAATCAACCCACATTTCCTAGCCGTCCTCACAGCACAAAATAC
CATCTCACTCGTAGCCACACCCACAGTCCTATTGACCCCATTGTCTCATGGACATCTTCT
ATCGCCCTCCACTGCCGCAATGGTCAATTACCCGAAGCCGCCGCAGAGTTTTCCCGCATG
CAAATTGCCGGGGTCAGACCCAATCACATAACTTTTCTCACTCTTCTTTCTGCCTGCACC
GACTTCCCTTTAGAGGGTCTAAGATTTGGGGGTTCAATCCATGCTTATGTTCGGAAACTG
GGTTTGGATACTGAAAATGTGATGGTGGGTACTGCCCTGGTTGATATGTACTCGAAATGT
GGTCAGCTGGATCTTGCCTGGTTAATGTTTGATGAAATGCATGTGAGGAATTCGGTGTCT
TGGAATACTATGATTGATGGGTGTATGAGGAATGGGGAAGTTGGGGAGGCGATTGTGTTG
TTTGATCAAATGTCTGAAAGAGATGCGATTTCTTGGACTTCCATGATTGGTGGGTTTGTT
AAGAAAGGTTGTTTTGAGCAAGCTCTGGAATGGTTTAGGGAAATGCAACTGGCTGGAGTG
GAGCCCGATTACGTGACCATCATTTCTGTGCTTGCAGCCTGTGCAAATTTGGGAGCACTT
GGTTTGGGCTTGTGGATAAACCGATTTGTCATGAAGCAGGATTTTAAGGACAATATCAAG
ATAAGTAATTCATTGATAGACATGTACTCTCGGTGTGGATGTATTCGACTAGCACGTCAA
GTTTTTGAGCAGATGCCTAAGCGAAGCTTGGTCTCATGGAACTCCATGATCGTGGGCTTT
GCTCTAAATGGGCATGCGGAGGAGGCTCTGGAATTCTTCAATTTGATGCGCAAAGAAGGG
TTCAGACCGGATGGAGTCAGTTTCACGGGAGCTCTAACAGCATGTAGCCATTCCGGTTTA
GTTGACGAGGGCCTCCAATTCTTTGATATCATGAAGAGAACTCGTAAAATCTCGCCTCGA
ATTGAGCATTATGGGTGCTTAGTGGATCTCTATAGCCGCGCAGGGAGGTTGGAAGATGCG
TTGAATGTTATAGCAAACATGCCCATGAAGCCAAATGAAGTTGTTCTGGGTTCTTTGCTG
GCTGCCTGTAGGACTCATGGAGATGTTGGCTTGGCTGAAAGGTTAATGAAGTATCTGTGC
GAGGTGGATCCCGGTAGCGATTCCAATTATGTGCTCCTTTCTAACATATATGCAGCAGTT
GGAAGGTGGGATGGTGCGAGCAAGGTTAGGAAGAAGATGAAGGCGCTTGGTATCCATAAG
AAACCAGGGTTCAGTTCGATTGAGATGGATGGCAGTATTCATGAATTCGTGGCCGGTGAT
AAGACCCATGTCGAGACGCAGAATATCTATGCCATGCTCGATCATCTATTCCTTGAGCTG
AGAATCTGCGGTTATGTTCCTGAAATAGAGGTTGGGAAATCTTATGAACATGACTGA

Peptide Sequence

PEP ID

VIT_06s0009g00650.t01
PEP Infomation

pep chromosome:12X:6:11385481:11387102:1 gene:VIT_06s0009g00650 transcript:VIT_06s0009g00650.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSLPAYTATTPSSLVTHPNSSPNSKPNQPTFPSRPHSTKYHLTRSHTHSPIDPIVSWTSS
IALHCRNGQLPEAAAEFSRMQIAGVRPNHITFLTLLSACTDFPLEGLRFGGSIHAYVRKL
GLDTENVMVGTALVDMYSKCGQLDLAWLMFDEMHVRNSVSWNTMIDGCMRNGEVGEAIVL
FDQMSERDAISWTSMIGGFVKKGCFEQALEWFREMQLAGVEPDYVTIISVLAACANLGAL
GLGLWINRFVMKQDFKDNIKISNSLIDMYSRCGCIRLARQVFEQMPKRSLVSWNSMIVGF
ALNGHAEEALEFFNLMRKEGFRPDGVSFTGALTACSHSGLVDEGLQFFDIMKRTRKISPR
IEHYGCLVDLYSRAGRLEDALNVIANMPMKPNEVVLGSLLAACRTHGDVGLAERLMKYLC
EVDPGSDSNYVLLSNIYAAVGRWDGASKVRKKMKALGIHKKPGFSSIEMDGSIHEFVAGD
KTHVETQNIYAMLDHLFLELRICGYVPEIEVGKSYEHD

Transcript Sequence

Transcript ID

VIT_06s0009g00650.t01
Transcript Infomation

cdna chromosome:12X:6:11385481:11387102:1 gene:VIT_06s0009g00650 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAATTCTCCCATTTTCTAAAAGGCAATCGCACCTCCCTCTACCAACGTTAATTCGAAAA
ATGAGCCTTCCCGCCTACACAGCTACCACACCTTCATCCCTTGTCACGCACCCAAACTCA
AGCCCAAACTCCAAACCAAATCAACCCACATTTCCTAGCCGTCCTCACAGCACAAAATAC
CATCTCACTCGTAGCCACACCCACAGTCCTATTGACCCCATTGTCTCATGGACATCTTCT
ATCGCCCTCCACTGCCGCAATGGTCAATTACCCGAAGCCGCCGCAGAGTTTTCCCGCATG
CAAATTGCCGGGGTCAGACCCAATCACATAACTTTTCTCACTCTTCTTTCTGCCTGCACC
GACTTCCCTTTAGAGGGTCTAAGATTTGGGGGTTCAATCCATGCTTATGTTCGGAAACTG
GGTTTGGATACTGAAAATGTGATGGTGGGTACTGCCCTGGTTGATATGTACTCGAAATGT
GGTCAGCTGGATCTTGCCTGGTTAATGTTTGATGAAATGCATGTGAGGAATTCGGTGTCT
TGGAATACTATGATTGATGGGTGTATGAGGAATGGGGAAGTTGGGGAGGCGATTGTGTTG
TTTGATCAAATGTCTGAAAGAGATGCGATTTCTTGGACTTCCATGATTGGTGGGTTTGTT
AAGAAAGGTTGTTTTGAGCAAGCTCTGGAATGGTTTAGGGAAATGCAACTGGCTGGAGTG
GAGCCCGATTACGTGACCATCATTTCTGTGCTTGCAGCCTGTGCAAATTTGGGAGCACTT
GGTTTGGGCTTGTGGATAAACCGATTTGTCATGAAGCAGGATTTTAAGGACAATATCAAG
ATAAGTAATTCATTGATAGACATGTACTCTCGGTGTGGATGTATTCGACTAGCACGTCAA
GTTTTTGAGCAGATGCCTAAGCGAAGCTTGGTCTCATGGAACTCCATGATCGTGGGCTTT
GCTCTAAATGGGCATGCGGAGGAGGCTCTGGAATTCTTCAATTTGATGCGCAAAGAAGGG
TTCAGACCGGATGGAGTCAGTTTCACGGGAGCTCTAACAGCATGTAGCCATTCCGGTTTA
GTTGACGAGGGCCTCCAATTCTTTGATATCATGAAGAGAACTCGTAAAATCTCGCCTCGA
ATTGAGCATTATGGGTGCTTAGTGGATCTCTATAGCCGCGCAGGGAGGTTGGAAGATGCG
TTGAATGTTATAGCAAACATGCCCATGAAGCCAAATGAAGTTGTTCTGGGTTCTTTGCTG
GCTGCCTGTAGGACTCATGGAGATGTTGGCTTGGCTGAAAGGTTAATGAAGTATCTGTGC
GAGGTGGATCCCGGTAGCGATTCCAATTATGTGCTCCTTTCTAACATATATGCAGCAGTT
GGAAGGTGGGATGGTGCGAGCAAGGTTAGGAAGAAGATGAAGGCGCTTGGTATCCATAAG
AAACCAGGGTTCAGTTCGATTGAGATGGATGGCAGTATTCATGAATTCGTGGCCGGTGAT
AAGACCCATGTCGAGACGCAGAATATCTATGCCATGCTCGATCATCTATTCCTTGAGCTG
AGAATCTGCGGTTATGTTCCTGAAATAGAGGTTGGGAAATCTTATGAACATGACTGAAAT
TT