Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g00250.t01
CDS Infomation

cds chromosome:12X:6:10272392:10279769:-1 gene:VIT_06s0009g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAAAGAACGAGAAAACTGGGCTTGGCAGGGCACTGGTCAAGCACCACAACCAAATG
CTCCAGCAGTCCAACGAAAAGGGCCGCTTCTACAAGAACCAGCACAAGAAGGTTCTGGAA
TCCATTACCGACGTCAACGACATAGACGCCGTCATCCAAGAGGCCGACGAAGCCCAACGC
CTCTTCGCCTTCGACCACCCTGCCCCCAACGTCCTCATCAATCTGGATACAAATGCTAGC
ACCAGTAACATGACTGATGAGGAAAGAAGAGAGCAACAGAAGAAAGAGGAGGCATTGCAT
GCTAGCATGCTGAATTGTTGGATCTTTTGCAGGCCACCGTGGAATGTGGGAATGACTGCA
GAAGAGCTTGATGCTAATGAAAGACAAGCTCTTTTAATCTGGCGGCGAAGTCTTGCAAGA
CTTGAGGGAAATGAGAACCTAGTACTTACTCCATTTGAGAAGAACCTGGATATCTGGCGA
CAACTTTGGCGGGTGCTAGAACGTAGTGATTTGCTTGTAATGGTTGTTGATGCACGAGAC
CCACTATTCTACCGTTGTCCTGATCTTGAGGCATATGCACAAGAGATTGATGAGCACAAA
AAGACATTGCTTCTGGTTAACAAGGCGGACCTTTTACCATTTTCTGTCAGGGAAAGATGG
GCAAAGTACTTTCGCCTTCATGGGATTCTCTTCATATTCTGGTCTGCTAAAGCTGCCTCT
GCAGCTTTAGAAGGAAAAAAGCTTAATGTGCAGTGGGAGACCCAAAAGCCCCTACAAGAA
ACGGATGATGCTGATACAAAAATATATGGCAGGGACGAGCTTCTTGCCAGATTACAATCT
GAGGCAGAGGAGATATCAGTGAGGAAGAGGAAATCAAGCTCCAGTAGTACAGATTCATCT
CATGTTCAATTTCATGGTGGACATGTTGCTGGAAATTCAACATCTAGGAGCGTAGTTGTT
GGATTCGTGGGGTACCCTAATGTTGGGAAGAGCTCAACGATCAATGCATTGGTCGGTGAG
AAGCGGACAGGTGTCACATCTACTCCAGGCAAGACAAAGCATTTTCAGACATTGATAATA
TCTGATGAACTGACCCTATGTGACTGCCCTGGATTAGTATTCCCATCCTTTTCTAGCTCG
AGATATGAGATGATTGCTTCTGGGGTCTTGCCAATTGATCGTATGACTGAGCACAGAGAG
GCTGTGCAGGTTGTGGCCAATCGAGTACCAAGACATGTCATTGAAGATGTCTACAAAATC
ACTCTGCCGAAACCCAAGCCATATGAGCAGCAGAATCGGCCTCCTCTGGCATCGGAATTT
TTGAGGGCGTATTGTGCCTCTCGTGGGTATGTAGCCTCAAGCGGTTTACCTGATGAAACA
AGAGCTGCACGCCAAATTTTGAAGGATTACATTGATGGAAAGGTGCCCCATTTTGAAATG
CCCCCTGGAATGACTGATGAGGTAAGTGAATTTGAAGATCCTGCAGAACCCAGCTTTTCT
GAGACACATGAATCTGATGCATCTGATTCTGAAAACCCCCCAAATAGTGAAAGTGAGAGT
GAAAGTGCACCAAATCTCGAGCATGTGTTGAACGATCTTGATGCATTTGACATGGCTAAT
GGGCTAGCTTCCAAGAAGGCCCCTGTTCAGAAAACTCCAAAGGCACCTCATAAACAACAC
AAGAAGCCTCAGAGGAAAAAGGATCGCTCATGGAGGGTCAAGAATGACGAGGATGATGGA
ATGCCAGTAGCAAGGGTCTTCCAGAAGCCAGTGAACACGGGTCCTTTAAATGTTGGGTGA

Peptide Sequence

PEP ID

VIT_06s0009g00250.t01
PEP Infomation

pep chromosome:12X:6:10272392:10279769:-1 gene:VIT_06s0009g00250 transcript:VIT_06s0009g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGKNEKTGLGRALVKHHNQMLQQSNEKGRFYKNQHKKVLESITDVNDIDAVIQEADEAQR
LFAFDHPAPNVLINLDTNASTSNMTDEERREQQKKEEALHASMLNCWIFCRPPWNVGMTA
EELDANERQALLIWRRSLARLEGNENLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARD
PLFYRCPDLEAYAQEIDEHKKTLLLVNKADLLPFSVRERWAKYFRLHGILFIFWSAKAAS
AALEGKKLNVQWETQKPLQETDDADTKIYGRDELLARLQSEAEEISVRKRKSSSSSTDSS
HVQFHGGHVAGNSTSRSVVVGFVGYPNVGKSSTINALVGEKRTGVTSTPGKTKHFQTLII
SDELTLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHREAVQVVANRVPRHVIEDVYKI
TLPKPKPYEQQNRPPLASEFLRAYCASRGYVASSGLPDETRAARQILKDYIDGKVPHFEM
PPGMTDEVSEFEDPAEPSFSETHESDASDSENPPNSESESESAPNLEHVLNDLDAFDMAN
GLASKKAPVQKTPKAPHKQHKKPQRKKDRSWRVKNDEDDGMPVARVFQKPVNTGPLNVG

Transcript Sequence

Transcript ID

VIT_06s0009g00250.t01
Transcript Infomation

cdna chromosome:12X:6:10272392:10279769:-1 gene:VIT_06s0009g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGGTTTCCGAGAAACCATGGGAAAGAACGAGAAAACTGGGCTTGGCAGGGCACTGGTC
AAGCACCACAACCAAATGCTCCAGCAGTCCAACGAAAAGGGCCGCTTCTACAAGAACCAG
CACAAGAAGGTTCTGGAATCCATTACCGACGTCAACGACATAGACGCCGTCATCCAAGAG
GCCGACGAAGCCCAACGCCTCTTCGCCTTCGACCACCCTGCCCCCAACGTCCTCATCAAT
CTGGATACAAATGCTAGCACCAGTAACATGACTGATGAGGAAAGAAGAGAGCAACAGAAG
AAAGAGGAGGCATTGCATGCTAGCATGCTGAATTGTTGGATCTTTTGCAGGCCACCGTGG
AATGTGGGAATGACTGCAGAAGAGCTTGATGCTAATGAAAGACAAGCTCTTTTAATCTGG
CGGCGAAGTCTTGCAAGACTTGAGGGAAATGAGAACCTAGTACTTACTCCATTTGAGAAG
AACCTGGATATCTGGCGACAACTTTGGCGGGTGCTAGAACGTAGTGATTTGCTTGTAATG
GTTGTTGATGCACGAGACCCACTATTCTACCGTTGTCCTGATCTTGAGGCATATGCACAA
GAGATTGATGAGCACAAAAAGACATTGCTTCTGGTTAACAAGGCGGACCTTTTACCATTT
TCTGTCAGGGAAAGATGGGCAAAGTACTTTCGCCTTCATGGGATTCTCTTCATATTCTGG
TCTGCTAAAGCTGCCTCTGCAGCTTTAGAAGGAAAAAAGCTTAATGTGCAGTGGGAGACC
CAAAAGCCCCTACAAGAAACGGATGATGCTGATACAAAAATATATGGCAGGGACGAGCTT
CTTGCCAGATTACAATCTGAGGCAGAGGAGATATCAGTGAGGAAGAGGAAATCAAGCTCC
AGTAGTACAGATTCATCTCATGTTCAATTTCATGGTGGACATGTTGCTGGAAATTCAACA
TCTAGGAGCGTAGTTGTTGGATTCGTGGGGTACCCTAATGTTGGGAAGAGCTCAACGATC
AATGCATTGGTCGGTGAGAAGCGGACAGGTGTCACATCTACTCCAGGCAAGACAAAGCAT
TTTCAGACATTGATAATATCTGATGAACTGACCCTATGTGACTGCCCTGGATTAGTATTC
CCATCCTTTTCTAGCTCGAGATATGAGATGATTGCTTCTGGGGTCTTGCCAATTGATCGT
ATGACTGAGCACAGAGAGGCTGTGCAGGTTGTGGCCAATCGAGTACCAAGACATGTCATT
GAAGATGTCTACAAAATCACTCTGCCGAAACCCAAGCCATATGAGCAGCAGAATCGGCCT
CCTCTGGCATCGGAATTTTTGAGGGCGTATTGTGCCTCTCGTGGGTATGTAGCCTCAAGC
GGTTTACCTGATGAAACAAGAGCTGCACGCCAAATTTTGAAGGATTACATTGATGGAAAG
GTGCCCCATTTTGAAATGCCCCCTGGAATGACTGATGAGGTAAGTGAATTTGAAGATCCT
GCAGAACCCAGCTTTTCTGAGACACATGAATCTGATGCATCTGATTCTGAAAACCCCCCA
AATAGTGAAAGTGAGAGTGAAAGTGCACCAAATCTCGAGCATGTGTTGAACGATCTTGAT
GCATTTGACATGGCTAATGGGCTAGCTTCCAAGAAGGCCCCTGTTCAGAAAACTCCAAAG
GCACCTCATAAACAACACAAGAAGCCTCAGAGGAAAAAGGATCGCTCATGGAGGGTCAAG
AATGACGAGGATGATGGAATGCCAGTAGCAAGGGTCTTCCAGAAGCCAGTGAACACGGGT
CCTTTAAATGTTGGGTGAGCCTGTGAGGAGGTCCTGTTGGAAAATTAGCCGTTGAATCAG
ATTCTTGTATGTTGCAGCATGCCTCTTCTTCTCCAGCAGAGGCACATCATGGCCACTGCA
AATTCACTTTTGGATTGCTAGTATAGTGATCTGTATTCTCTCTTTCTCTTTGTTTGTTTT
AAAGAAAATATATGAAGAATATATTATTCTATAGCACAATCACTTATGGAGTGGTAGA