Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0009g00240.t01
CDS Infomation

cds chromosome:12X:6:10243184:10267916:-1 gene:VIT_06s0009g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGAGCTCGGAAGAGCATTCATGCTGGCAAAGCCACAATTGACGTTAATGTTGATTTC
ACTCACAAGTTATGTACTGCTTTGATGCTTCAGCCTTTCAGGGACTCTGGCGGTCCTCTG
TCTCAGGTTATTGGAAGTCTTTGCATCAAACATCCAAATTTATTTGGCAGAAGTGAGAAG
CTCGATGTTTCATGGGATAAGGGACTTTTTGATTCCAATATCTTGATAGCTTATAGAAGG
CCTCGGCCTGAATGGCTTGCTCAACAGTCTTTTATCATTCAGCACTCACTTTCGCCTGAG
ATTGGGGTACATGGATTTACTACTGACAACTTCTCCCGTTCGGTGAGTGGTGGTGTGAAT
CTGTCTCGATTTTCAGTGGGTATGGATCTGAATGATCCTGCAAGTTCCAACTGGAGCAAC
ACAACCAGTATTAGGTTTGAGCATGTTCGTCCAATTAGTGATGATGGCCGCTCCGTTAGC
AGAGATCGTGATGGGTTTCCAGTGACTTGCAGTGGAACTTTTCATGACAGTATGGTAGTT
TTGAAGCAAGAATCTCAATTTGCAAAGGCAAATGACCACAGTTTTACTCAGCTTAATATG
CAAATAGAACAAGGGATTCCTGTTCTTTCTAAATGGCTAATCTTCAACCGTTTCAAGTTT
GTTGCATCTAAGGGAGTTAGACTTGGGCCAGCATTTCTCTTATCAAGTCTGACAGGTGGT
TCCATAGTAGGGGACATGGCTCCATATCAAGCATTTGCAATTGGGGGTCTTGGTAGTGTG
CGAGGGTATGGTGAGGGTGCAGTTGGATCTGGGACATCATGTCTAGTTGCTAACAGTGAA
TTGACATTCCCTTTGAACAAGATATTGGAAGGTGCTGTTTTCTTGGACTTCGGAACTGAC
TTGGGCTCTGGTCGTCATGTTCCTGGAAATCCAGCACTGAGGCAGGGCAAGCCTGGTTCA
GGTGTTGGGCTTGGTTACAGCCTTAGGATGAAATCTCGGTTAGGCCACTTTCAGGTTGAT
TATGCTATCAATGCATTTCAAGAAAGAACTGTCTACTTTGGTATCAGCAACCTTGCATCA
TGA

Peptide Sequence

PEP ID

VIT_06s0009g00240.t01
PEP Infomation

pep chromosome:12X:6:10243184:10267916:-1 gene:VIT_06s0009g00240 transcript:VIT_06s0009g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGARKSIHAGKATIDVNVDFTHKLCTALMLQPFRDSGGPLSQVIGSLCIKHPNLFGRSEK
LDVSWDKGLFDSNILIAYRRPRPEWLAQQSFIIQHSLSPEIGVHGFTTDNFSRSVSGGVN
LSRFSVGMDLNDPASSNWSNTTSIRFEHVRPISDDGRSVSRDRDGFPVTCSGTFHDSMVV
LKQESQFAKANDHSFTQLNMQIEQGIPVLSKWLIFNRFKFVASKGVRLGPAFLLSSLTGG
SIVGDMAPYQAFAIGGLGSVRGYGEGAVGSGTSCLVANSELTFPLNKILEGAVFLDFGTD
LGSGRHVPGNPALRQGKPGSGVGLGYSLRMKSRLGHFQVDYAINAFQERTVYFGISNLAS

Transcript Sequence

Transcript ID

VIT_06s0009g00240.t01
Transcript Infomation

cdna chromosome:12X:6:10243184:10267916:-1 gene:VIT_06s0009g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTGGATTTGTGTTGATGGGTTAGTCTAGTGATGGGATTATGGGAGCTCGGAAGAGCATT
CATGCTGGCAAAGCCACAATTGACGTTAATGTTGATTTCACTCACAAGTTATGTACTGCT
TTGATGCTTCAGCCTTTCAGGGACTCTGGCGGTCCTCTGTCTCAGGTTATTGGAAGTCTT
TGCATCAAACATCCAAATTTATTTGGCAGAAGTGAGAAGCTCGATGTTTCATGGGATAAG
GGACTTTTTGATTCCAATATCTTGATAGCTTATAGAAGGCCTCGGCCTGAATGGCTTGCT
CAACAGTCTTTTATCATTCAGCACTCACTTTCGCCTGAGATTGGGGTACATGGATTTACT
ACTGACAACTTCTCCCGTTCGGTGAGTGGTGGTGTGAATCTGTCTCGATTTTCAGTGGGT
ATGGATCTGAATGATCCTGCAAGTTCCAACTGGAGCAACACAACCAGTATTAGGTTTGAG
CATGTTCGTCCAATTAGTGATGATGGCCGCTCCGTTAGCAGAGATCGTGATGGGTTTCCA
GTGACTTGCAGTGGAACTTTTCATGACAGTATGGTAGTTTTGAAGCAAGAATCTCAATTT
GCAAAGGCAAATGACCACAGTTTTACTCAGCTTAATATGCAAATAGAACAAGGGATTCCT
GTTCTTTCTAAATGGCTAATCTTCAACCGTTTCAAGTTTGTTGCATCTAAGGGAGTTAGA
CTTGGGCCAGCATTTCTCTTATCAAGTCTGACAGGTGGTTCCATAGTAGGGGACATGGCT
CCATATCAAGCATTTGCAATTGGGGGTCTTGGTAGTGTGCGAGGGTATGGTGAGGGTGCA
GTTGGATCTGGGACATCATGTCTAGTTGCTAACAGTGAATTGACATTCCCTTTGAACAAG
ATATTGGAAGGTGCTGTTTTCTTGGACTTCGGAACTGACTTGGGCTCTGGTCGTCATGTT
CCTGGAAATCCAGCACTGAGGCAGGGCAAGCCTGGTTCAGGTGTTGGGCTTGGTTACAGC
CTTAGGATGAAATCTCGGTTAGGCCACTTTCAGGTTGATTATGCTATCAATGCATTTCAA
GAAAGAACTGTCTACTTTGGTATCAGCAACCTTGCATCATGAAAGTCCCAAAACCCAAAA
GTTTCAGATTCCATGCTTCTGAAAGTTATGGTGCTAAAATTCATTAAACAGTGGGGTGTG
ATGGGTTTGCTTGGACTCTGGGCTTCAAAAGAACATCCCCTTTTCTCATGGGAATGGTGG
TGTTCCATCTTTGCTCAACACATTAAAAGAGAAGTTGCAGACACTTGGAAGATTATGTTT
TGAGTTGCAGATACTCAACACACCCCCTCATTTCTGGGACTCTAGAGAAATTGAAACCTT
TTCCCATTGGACTGAAATATTTTTGGTTTTTCCTTACTGAATTCACAATGTGAGATTGAG
GATCTCACTATTTTTTTTTTCTGAGGGCTGTTGTCACTACAAAGTATATTCTTTATGCCG
TGGGTAAATAATTGTTATGAATAATTCCTT