Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08440.t01
CDS Infomation

cds chromosome:12X:6:9367048:9373464:-1 gene:VIT_06s0004g08440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGAGATGGTCGTGTGTTTTAAGGCAGGGATTGTCAGCGGCCGTTAGGTATGGGAAT
GGAAATGGCGGAAAGCCAGCTTTCGGATCCTGCGTTCTCTTACCCAAAGTTATGGTGTCA
ATGTTGTCGTCCACGGCACCACCGCCGCCGCCACCTCCCGCTTCTTCGTCGCCCAGCTTC
GCGTCAGGAGATCCGATATCCTTCGCCGAGGCAAAGAAGCTAATGAGACTCGTGAATGTG
GAGGCGCTGAAGATGAAGCTGGGAATGGAAGGGAAAGAGGTGATTTGCTATTCTGAGCTT
CTCGATGCCTGCGAGAGCATGGGCGTGGCAAGATCGCTTGATGAGGCTGCCGCTTTTGCC
CGTGTCCTTGACGAGGCAGGCATCGTCCTTCTCTTCAGAAACAAGGTGTACCTACATCCG
GACAAGGTTGTGGATCTGGTTAGAAGAGCAATGCCCTTGGCCCTAGCACCAGAAGATGAC
CCTAGGAGGGATGAACTGAAAAGGCTGCAGGAGAAGAAGGAAGAAATTGACAGGCTGGCA
CATAAGCAGGTCCGTCGTATCCTCTGGTCAGGTCTGGGGTTGACTATGGCACAAGTCGGA
CTGTTCTTTCGGTTAACATTCTGGGAATTCTCATGGGATGTCATGGAGCCCATTGCATTT
TTCACAACCACCGCAGGTATAATTGTAGGTTATGCTTACTTCCTGATCACTTCAAATGAC
CCCACATACCAAGACATGGTGAAAAGGCTCTTCCTCTCAAGGCAGAGGAAGCTGTTCAAG
AAGCACAATTTTGATATTGACAGATTTTTGGAATTACAAAAAACATGCAAGTCGCCACTA
GATGTCTCTGCCTATGTCAAAAGTCGCAGGACAGAACTAGAGGACGCTTTACATGGGAAT
TAA

Peptide Sequence

PEP ID

VIT_06s0004g08440.t01
PEP Infomation

pep chromosome:12X:6:9367048:9373464:-1 gene:VIT_06s0004g08440 transcript:VIT_06s0004g08440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWRWSCVLRQGLSAAVRYGNGNGGKPAFGSCVLLPKVMVSMLSSTAPPPPPPPASSSPSF
ASGDPISFAEAKKLMRLVNVEALKMKLGMEGKEVICYSELLDACESMGVARSLDEAAAFA
RVLDEAGIVLLFRNKVYLHPDKVVDLVRRAMPLALAPEDDPRRDELKRLQEKKEEIDRLA
HKQVRRILWSGLGLTMAQVGLFFRLTFWEFSWDVMEPIAFFTTTAGIIVGYAYFLITSND
PTYQDMVKRLFLSRQRKLFKKHNFDIDRFLELQKTCKSPLDVSAYVKSRRTELEDALHGN

Transcript Sequence

Transcript ID

VIT_06s0004g08440.t01
Transcript Infomation

cdna chromosome:12X:6:9367048:9373464:-1 gene:VIT_06s0004g08440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGTTGGAACAGTCAGGTCTCTCTCCCCTTCCCGATCGTTGTGCCCTGAGTTTCTCTCTTA
TCTTGACAATCAATCACTTCCTCAATATTACACTGGATCTGAGATTCTAATGGTGGAGCA
TTCATTAATACTAAGGATTGAAGGAAGGAAAGAAACATGTGGAGATGGTCGTGTGTTTTA
AGGCAGGGATTGTCAGCGGCCGTTAGGTATGGGAATGGAAATGGCGGAAAGCCAGCTTTC
GGATCCTGCGTTCTCTTACCCAAAGTTATGGTGTCAATGTTGTCGTCCACGGCACCACCG
CCGCCGCCACCTCCCGCTTCTTCGTCGCCCAGCTTCGCGTCAGGAGATCCGATATCCTTC
GCCGAGGCAAAGAAGCTAATGAGACTCGTGAATGTGGAGGCGCTGAAGATGAAGCTGGGA
ATGGAAGGGAAAGAGGTGATTTGCTATTCTGAGCTTCTCGATGCCTGCGAGAGCATGGGC
GTGGCAAGATCGCTTGATGAGGCTGCCGCTTTTGCCCGTGTCCTTGACGAGGCAGGCATC
GTCCTTCTCTTCAGAAACAAGGTGTACCTACATCCGGACAAGGTTGTGGATCTGGTTAGA
AGAGCAATGCCCTTGGCCCTAGCACCAGAAGATGACCCTAGGAGGGATGAACTGAAAAGG
CTGCAGGAGAAGAAGGAAGAAATTGACAGGCTGGCACATAAGCAGGTCCGTCGTATCCTC
TGGTCAGGTCTGGGGTTGACTATGGCACAAGTCGGACTGTTCTTTCGGTTAACATTCTGG
GAATTCTCATGGGATGTCATGGAGCCCATTGCATTTTTCACAACCACCGCAGGTATAATT
GTAGGTTATGCTTACTTCCTGATCACTTCAAATGACCCCACATACCAAGACATGGTGAAA
AGGCTCTTCCTCTCAAGGCAGAGGAAGCTGTTCAAGAAGCACAATTTTGATATTGACAGA
TTTTTGGAATTACAAAAAACATGCAAGTCGCCACTAGATGTCTCTGCCTATGTCAAAAGT
CGCAGGACAGAACTAGAGGACGCTTTACATGGGAATTAATACCCCCTCTGTCATCGTTTT
TTGTCTTTCTATCTTCATAATCTTTCCATTTCCTTTTGCTGTGGATGTTTTTGAAATCTT
GCATTAGAATTTATCTTATTTTCCATCTAGCCGCTCCCCCCTCCCCTTTCCTATTCAGCA
GGGGAAATGTTTTACTGAACATGCTGCTGGTGCGTTCCTGAGCCTGCTTTTCAGTTCTCA
TCACATGGAACCGAAACAGATGCCGGGCCTTTCCTTGTTTTAATGGGATTCATATCCTCT
GCACCCTTTTTGTTGGTTATCATGGTGGATAGCGGCGATAATACTAATTTCCACCTGCTC
CCAAATTGTCTGTTGCAATCCCATCTTGTACCCGATCAGTGATTTCTATATTAACGAGTC
CCATGGCTTCAGTTATGTATTAACGCTCACAAAAAGGTGGAAAAATTTATACACTAGATA
TGGTGTACCAGAAGAATGTAACCTCCTGCAACTTACATAGTAACAAAATAATCAAATGAT
CGAAACGGTTTTCAAGTCATTGATGTTATACTGTCCATGGCTGCAGGCTCCATTCATATT
TAGGTTATGTTTGGTCTTGGTCATTCTACCTGCCTTCAATACCTTATGATATGAAGGTTT
TATGTTTGTTCTTTGGCTTGCATCTTGCGTCAACCTCTTGCCTCCAGTAGTAGTATCTGG
AGGATAATTTTGATAGGAGAAGAGCAGCCTGGCCGGGACTGGAACAATGCATAGGAGACT
AAAGCCATTTCAGGACAGCTGCTGGCGGGTGCCAAGAAGAAAATACCATAAATGGTAAGG
CTTCAATCAGTTAGGCTCGCTAAGAGCAGTCTCAAGTAAAGTAGGCATATGGAACAACTG
GCTATATAAGGAGCACAAATCAAACAATCACAGAAATTCCTCAGCATTAGCCTTGTTGCC
TGCATTCTTGAGTCCATGACATGAAGCCATTGACTATCCTGACAGCATTATGGTAGGACC
CGACGCCAAAGCAATGTCCAACATAAATAGCGTGTATTTACACTGCTCTTAATCAAAGTA
GCAAATATACTGGTGATTGAAACCTTGTACCAACCCAAGTTTTACATAAACACCCCAAGC
T