Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08310.t01
CDS Infomation

cds chromosome:12X:6:9119929:9133153:-1 gene:VIT_06s0004g08310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGCATATAGGAGAAGATTGGGAACCTCAAGGGCTTCAGCGATTGAAGATGATGAA
GCTGATTCATCTTCATCGTCGCTCGCTGCTAAGGCCATTAGAGCTTCCTCCGCCCATCGG
GACTCCTCCCTCTCCTCTGCTTACGGCCTCTCTCCTTCCTCCACCCCTCCTCCACCCTCC
AAGGATTCAACCTCTTATGAGTATACCTCTATGAAGAGTTCGAATGAATCCAAATATGGT
TTTTGGGGTGCTCTGGCAAGGAAAGCTAAAGCTATTATTGAGGATGATAATGAAGCCCAA
CAACCTGAAGCACCTGGAAGAACAAGCAGACAGGGGCCTGGTACAGTAACAGGGCAGCAC
CATAACCAATATCACTCACCTGAGGGTCATCAAAAAACGGGTGCTCCCAAGATACAGAAG
GGAATGGATGTGATTGCGTCTTCCCTTAATTATATTGGTGGCACCATTGGTAATGCCTTT
GAGGAGGGCCGTACAATTGTGGAGAATCGGACTGCAGACATCATTCAAGAAACTCGCAAA
CTGCATATCAGGAAAAAAGGCAGTGGTTCTGAGCCAAAGCATCAGGCCACAAATATTTAT
ACCAGGAAACAAACCTCAATGCAGGCACAAATGGAGCCCCAGCTGCAAGCTGACCAAGAA
ATTCAATTGAAGGCATCCCGCGACGTTGCAATGGCAATGGCTGCCAAAGCAAAGCTCCTA
CTTCGGGAGCTGAAGACTGTTAAAGCAGACCTGGCATTTGCCAAAGAGCGATGTGCTCAG
CTGGAAGAAGAAAATCGAATACTTCGGGAGCATCACGAGAAGGGCGACAACCCAGAAGAT
GATGATCTTATACGGCTTCAACTTGAAACACTTTTGGCAGAGAAAGCTCGACTAGCACAG
GAGAACTCAGTCTACGCACGCGAGAACCGCTTCCTAAGGGAGATTGTAGAATACCACCAG
CTCACTATGCAGGATGTAATATACTTGGATGAGAGGACTGAAGAGGTAACTGAAGTTTAT
CCCATCAAGGTACCTACTGTGAATAACCTTCATTCGGTTGCCACAACACTTCCACCTCTA
GCCTCATCTCTGCCTTTTGAGGGGGGGCCCAAAACGAGTCCACAAGGGATCCAACATGTC
TCCACTGCCCCTGTGCCACCACAAGCACTTGCCGAGATCTCCCAAAGTGTTGCCTCACAG
AACCTTCATATTCCTGTTCCGGTTGCAGAAGATTCAAAAAGAGACTCAAATCCATCCGCT
TGA

Peptide Sequence

PEP ID

VIT_06s0004g08310.t01
PEP Infomation

pep chromosome:12X:6:9119929:9133153:-1 gene:VIT_06s0004g08310 transcript:VIT_06s0004g08310.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAAYRRRLGTSRASAIEDDEADSSSSSLAAKAIRASSAHRDSSLSSAYGLSPSSTPPPPS
KDSTSYEYTSMKSSNESKYGFWGALARKAKAIIEDDNEAQQPEAPGRTSRQGPGTVTGQH
HNQYHSPEGHQKTGAPKIQKGMDVIASSLNYIGGTIGNAFEEGRTIVENRTADIIQETRK
LHIRKKGSGSEPKHQATNIYTRKQTSMQAQMEPQLQADQEIQLKASRDVAMAMAAKAKLL
LRELKTVKADLAFAKERCAQLEEENRILREHHEKGDNPEDDDLIRLQLETLLAEKARLAQ
ENSVYARENRFLREIVEYHQLTMQDVIYLDERTEEVTEVYPIKVPTVNNLHSVATTLPPL
ASSLPFEGGPKTSPQGIQHVSTAPVPPQALAEISQSVASQNLHIPVPVAEDSKRDSNPSA

Transcript Sequence

Transcript ID

VIT_06s0004g08310.t01
Transcript Infomation

cdna chromosome:12X:6:9119929:9133153:-1 gene:VIT_06s0004g08310 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGGGAGGCGTGAGGTGGGGGGTATTTGGGGGCTCCGCCTCTCTCTTCCTGATTGACTAC
CTCTTCTGGCTTTCTCCAATCGATTCTGCAGTGGCCTATACATATTTCTCATATATAGGG
TTGGCATAAGAAGAAAATCAAATCGGAATCAAGAATCAAATTCATTACCCTTATCTGGAT
GGCGGCATATAGGAGAAGATTGGGAACCTCAAGGGCTTCAGCGATTGAAGATGATGAAGC
TGATTCATCTTCATCGTCGCTCGCTGCTAAGGCCATTAGAGCTTCCTCCGCCCATCGGGA
CTCCTCCCTCTCCTCTGCTTACGGCCTCTCTCCTTCCTCCACCCCTCCTCCACCCTCCAA
GGATTCAACCTCTTATGAGTATACCTCTATGAAGAGTTCGAATGAATCCAAATATGGTTT
TTGGGGTGCTCTGGCAAGGAAAGCTAAAGCTATTATTGAGGATGATAATGAAGCCCAACA
ACCTGAAGCACCTGGAAGAACAAGCAGACAGGGGCCTGGTACAGTAACAGGGCAGCACCA
TAACCAATATCACTCACCTGAGGGTCATCAAAAAACGGGTGCTCCCAAGATACAGAAGGG
AATGGATGTGATTGCGTCTTCCCTTAATTATATTGGTGGCACCATTGGTAATGCCTTTGA
GGAGGGCCGTACAATTGTGGAGAATCGGACTGCAGACATCATTCAAGAAACTCGCAAACT
GCATATCAGGAAAAAAGGCAGTGGTTCTGAGCCAAAGCATCAGGCCACAAATATTTATAC
CAGGAAACAAACCTCAATGCAGGCACAAATGGAGCCCCAGCTGCAAGCTGACCAAGAAAT
TCAATTGAAGGCATCCCGCGACGTTGCAATGGCAATGGCTGCCAAAGCAAAGCTCCTACT
TCGGGAGCTGAAGACTGTTAAAGCAGACCTGGCATTTGCCAAAGAGCGATGTGCTCAGCT
GGAAGAAGAAAATCGAATACTTCGGGAGCATCACGAGAAGGGCGACAACCCAGAAGATGA
TGATCTTATACGGCTTCAACTTGAAACACTTTTGGCAGAGAAAGCTCGACTAGCACAGGA
GAACTCAGTCTACGCACGCGAGAACCGCTTCCTAAGGGAGATTGTAGAATACCACCAGCT
CACTATGCAGGATGTAATATACTTGGATGAGAGGACTGAAGAGGTAACTGAAGTTTATCC
CATCAAGGTACCTACTGTGAATAACCTTCATTCGGTTGCCACAACACTTCCACCTCTAGC
CTCATCTCTGCCTTTTGAGGGGGGGCCCAAAACGAGTCCACAAGGGATCCAACATGTCTC
CACTGCCCCTGTGCCACCACAAGCACTTGCCGAGATCTCCCAAAGTGTTGCCTCACAGAA
CCTTCATATTCCTGTTCCGGTTGCAGAAGATTCAAAAAGAGACTCAAATCCATCCGCTTG
AATAGGATTGTAACGCTTTCTCTTTTGATGGGTGCCACCTTTGTAACAACATTTTCCAGT
CCTTGATATTTTTTCTTTTAAGTTCTTTCTATTTGTTGTTTCTCCATAGCATGGGCCAAT
ATATGATTGTTTTGTATCTTTCACGGTGTATCTTATGCTTTTGGTTTGTTACTATGTGAA
AAACAATAACATCACAACGACTAGTCCTTTGAAGGGTTAA