Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08230.t01
CDS Infomation

cds chromosome:12X:6:9015601:9017926:-1 gene:VIT_06s0004g08230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCCTCTCTCAAGGGCAACAATAGGCGCTCTCTGGCCATGGAGAGGACAGGTCAA
TGGGTTTTCTCTCAAGAGATTCCTACTGATGTGGTAGTTGAAGTTGGAGAGGCCAATTTC
TCTCTTCACAAGTTCATGCTAGTGGCGAAGAGCAACTACATCAGAAAACTGATAATGGAA
TCGAAAGAAGCAGATTTAACGAATATTGATCTCTCGGACATACCTGGAGGGCCTGAGATC
TTTGAGAAAGCTGCAAAGTTCTGTTATGGCGTCAATTTTGAGATTACAGTTCACAACGTC
GCGGCTCTCCGATGTGCTGCAGAGTATCTCCAGATGACCGACAAGTACTGCGACGGCAAC
CTGTCCGGACGGACGGAGGATTTCCTCAAACAAGTTGCCTTGACCAGCCTTTCCGGCGCC
GTCGTGGTTTTGAAGTCCTGCGAAGATCTTCTCCCTAAGGCGGAAGAGCTTAAGATCGTT
CAAAGATGCGTTGATGTTGCAAGCACAAAGGCTTGTAATGAAGCAAATTTCCCCAGTCGT
TCGCCTCCTAACTGGTGGACAGAGGAGCTTTCAATTTTGGACATCGGGTTCTTCGAGAAA
ATCATAGCTGCCATGAAATTACGCGGCGCGAAATCCCTAACCGTAGCCAGCGCACTGATC
ACGTACACAGAGAGAACGCTCCGAGATCTCGTCCGAGACCACACCGGTAACGGCATCAGG
TCGTCGGACACCGAGGATTCCAACCTTAGAAGTCGGCAGCGGGAGCTTCTAGAGGCGATC
GTCGTACTCTTACCCTCCGAGAGAGCAGCGCTCCCTATAAACTTCCTCTGCTGTCTTCTT
CGCTCCGCGATCTTCTTAAAAGTAGCCCATACTTGTAAGAACGAGCTCGAGAAACGGATC
TCGACGATCTTAGAGCACGTAACCGTCGACGATCTCTTGGTCCTGTCGTTCACCTACGAC
GGCGAGAGGCTCTTCGACCTGGACAGCGTTAGAAGAATTATATCAGGATTCGTGGAGAAG
GAGAAGAGCGTGGCTGTCTTCAACGGTGGAGATTTCCAGGAGGTTTGTTCCACCGCGATG
CAGAGAGTCGCCAAGACTGTAGACGCGTACCTAGGGGAGATTGCCGCGCACGGAGAGCTC
AGCATATGCAAATTCAACGGCATCGCTAATCTAGTGCCCAAGGACGCCAGAAAGGTGGAC
GACGACCTGTATCGCGCCATTGATATCTTCCTCAAGGCACATCCGAACCTGGACGAGATC
GAGAGGGAGAAGGTATGCAGCGTGATGGATCCACTGAAACTCTCGTACGAAGCTCGAGTC
CACGCTTCGCAGAACAAGCGGCTGCCGGTGCAGATCGTTCTGCACGCCCTCTACTACGAT
CAGCTGAAGCTCAGGAGCGGCGCCGACGATGCCCACGACGCCATGAGCACGAGGAGCCAT
TTGCAGGCGGACGTGTCGCTGGTGAGAGAGAACGAGGCTCTGAGGTCGGAGCTGATGAAG
ATGAAGATGTACATCTCCGACATACAGAAGAATTCTTCGGCCGGCGGTGGAAAGGGATTA
GGCGGTGGTTCAAAGAAGCCCACGTTTTTCTCGTCCATGTCCAAGACATTAGGAAAGCTG
AATCCCTTCCGGCATGGATCCAAGGACACTTCCAACATTGATGACGAGACGGCGGTCGAT
GTTACCAAGCCCAGAAGAAGAAGGTTCTCCATCTCCTAA

Peptide Sequence

PEP ID

VIT_06s0004g08230.t01
PEP Infomation

pep chromosome:12X:6:9015601:9017926:-1 gene:VIT_06s0004g08230 transcript:VIT_06s0004g08230.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAASLKGNNRRSLAMERTGQWVFSQEIPTDVVVEVGEANFSLHKFMLVAKSNYIRKLIME
SKEADLTNIDLSDIPGGPEIFEKAAKFCYGVNFEITVHNVAALRCAAEYLQMTDKYCDGN
LSGRTEDFLKQVALTSLSGAVVVLKSCEDLLPKAEELKIVQRCVDVASTKACNEANFPSR
SPPNWWTEELSILDIGFFEKIIAAMKLRGAKSLTVASALITYTERTLRDLVRDHTGNGIR
SSDTEDSNLRSRQRELLEAIVVLLPSERAALPINFLCCLLRSAIFLKVAHTCKNELEKRI
STILEHVTVDDLLVLSFTYDGERLFDLDSVRRIISGFVEKEKSVAVFNGGDFQEVCSTAM
QRVAKTVDAYLGEIAAHGELSICKFNGIANLVPKDARKVDDDLYRAIDIFLKAHPNLDEI
EREKVCSVMDPLKLSYEARVHASQNKRLPVQIVLHALYYDQLKLRSGADDAHDAMSTRSH
LQADVSLVRENEALRSELMKMKMYISDIQKNSSAGGGKGLGGGSKKPTFFSSMSKTLGKL
NPFRHGSKDTSNIDDETAVDVTKPRRRRFSIS

Transcript Sequence

Transcript ID

VIT_06s0004g08230.t01
Transcript Infomation

cdna chromosome:12X:6:9015601:9017926:-1 gene:VIT_06s0004g08230 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATCTGACGATCTCTATTCTCAGAAACCAATCGATCTCTCATGGCCGCCTCTCTCAAGGGC
AACAATAGGCGCTCTCTGGCCATGGAGAGGACAGGTCAATGGGTTTTCTCTCAAGAGATT
CCTACTGATGTGGTAGTTGAAGTTGGAGAGGCCAATTTCTCTCTTCACAAGTTCATGCTA
GTGGCGAAGAGCAACTACATCAGAAAACTGATAATGGAATCGAAAGAAGCAGATTTAACG
AATATTGATCTCTCGGACATACCTGGAGGGCCTGAGATCTTTGAGAAAGCTGCAAAGTTC
TGTTATGGCGTCAATTTTGAGATTACAGTTCACAACGTCGCGGCTCTCCGATGTGCTGCA
GAGTATCTCCAGATGACCGACAAGTACTGCGACGGCAACCTGTCCGGACGGACGGAGGAT
TTCCTCAAACAAGTTGCCTTGACCAGCCTTTCCGGCGCCGTCGTGGTTTTGAAGTCCTGC
GAAGATCTTCTCCCTAAGGCGGAAGAGCTTAAGATCGTTCAAAGATGCGTTGATGTTGCA
AGCACAAAGGCTTGTAATGAAGCAAATTTCCCCAGTCGTTCGCCTCCTAACTGGTGGACA
GAGGAGCTTTCAATTTTGGACATCGGGTTCTTCGAGAAAATCATAGCTGCCATGAAATTA
CGCGGCGCGAAATCCCTAACCGTAGCCAGCGCACTGATCACGTACACAGAGAGAACGCTC
CGAGATCTCGTCCGAGACCACACCGGTAACGGCATCAGGTCGTCGGACACCGAGGATTCC
AACCTTAGAAGTCGGCAGCGGGAGCTTCTAGAGGCGATCGTCGTACTCTTACCCTCCGAG
AGAGCAGCGCTCCCTATAAACTTCCTCTGCTGTCTTCTTCGCTCCGCGATCTTCTTAAAA
GTAGCCCATACTTGTAAGAACGAGCTCGAGAAACGGATCTCGACGATCTTAGAGCACGTA
ACCGTCGACGATCTCTTGGTCCTGTCGTTCACCTACGACGGCGAGAGGCTCTTCGACCTG
GACAGCGTTAGAAGAATTATATCAGGATTCGTGGAGAAGGAGAAGAGCGTGGCTGTCTTC
AACGGTGGAGATTTCCAGGAGGTTTGTTCCACCGCGATGCAGAGAGTCGCCAAGACTGTA
GACGCGTACCTAGGGGAGATTGCCGCGCACGGAGAGCTCAGCATATGCAAATTCAACGGC
ATCGCTAATCTAGTGCCCAAGGACGCCAGAAAGGTGGACGACGACCTGTATCGCGCCATT
GATATCTTCCTCAAGGCACATCCGAACCTGGACGAGATCGAGAGGGAGAAGGTATGCAGC
GTGATGGATCCACTGAAACTCTCGTACGAAGCTCGAGTCCACGCTTCGCAGAACAAGCGG
CTGCCGGTGCAGATCGTTCTGCACGCCCTCTACTACGATCAGCTGAAGCTCAGGAGCGGC
GCCGACGATGCCCACGACGCCATGAGCACGAGGAGCCATTTGCAGGCGGACGTGTCGCTG
GTGAGAGAGAACGAGGCTCTGAGGTCGGAGCTGATGAAGATGAAGATGTACATCTCCGAC
ATACAGAAGAATTCTTCGGCCGGCGGTGGAAAGGGATTAGGCGGTGGTTCAAAGAAGCCC
ACGTTTTTCTCGTCCATGTCCAAGACATTAGGAAAGCTGAATCCCTTCCGGCATGGATCC
AAGGACACTTCCAACATTGATGACGAGACGGCGGTCGATGTTACCAAGCCCAGAAGAAGA
AGGTTCTCCATCTCCTAATCCACTTTTGAAGGAGCATCTACTTCTAATCCCGCTTTAATT
AATTTTAATTGTGTGCTCTGGTTTGTTATTCAAATCTCATTTGTTTTTATTCTGTATTTT
ATATGTTAGGGAATTGAATTGTTGTTTGCGTGACTTTGATTTTAATCGTCAAAGTTGAAG
TTGTAATCAAGTGATTTTGTATAATAAATAGATTGCATTCTCTCCTTTCG