Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08160.t01
CDS Infomation

cds chromosome:12X:6:8895193:8916559:1 gene:VIT_06s0004g08160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTATGTGCCACCGCACCTGAGGAACCCTTCTTCTTCTATCTCTCGAACCTCCAAA
CCTACCGAAACCTCCGCGGTAACCCTAGACGACACTCATCGCACCACCAACAACCTTTCC
TATTCCTCCACAAACTCTCATCTCTCTCATTCCAACGCCTCTTCCTCTCCTTCTCTCTCT
CGTTGGGCCTCCTCCAATGCCGCCGCCGTGCCTCGGACTCCCTCCGTTCCGGAGCCCGTT
TTCCCTCAGTGGAAGCCTTCCGACCGTGTTTTCCTTATGAAACCTGAACAGATTGAAGAG
GTCCGATTGCGGCTTAATGTTGATGTTACTGTTGCTCCAGACTTGCCTCCTGCACCTGCA
CCAATTGAATCATTCACAGACATGGGTCTGCACCAAAGCATCATGAAGGATATTACCTTT
CATGAATATACTAGGCCCACCTTTATTCAAGCTCAGGCCATGCCAGTTGCTCTCAGCGGA
AGGGATCTCCTGGGATGTGCTGAAACTGGTAGTGGAAAGACTGCTGCTTTTGCTATTCCT
ATGATTCAGCATTGCTTGGCTCAACCTCCTGTTCGGCGAGGTGATGGACCATTGGCATTG
GTCTTGGCTCCCACAAGAGAGCTTGCCCAACAAATAGAAAAGGAGGTTAAGGCTTTTAGT
AGATCACTTGATTCCTTTAGAACTGCGATAGTTGTGGGTGGAACAAACATTTCCGAGCAG
AGGTCTGAACTTAGAGCAGGAGTAAATATAGTGGTTGCCACTCCTGGAAGATTCATTCAT
CATTTACAAGAAGGAAACACGTCTCTTTCCAGAATTTCATTTGTTGTTTTGGATGAAGCT
GACAGAATGCTTGACATGGGATTTGAACCACAAATAAGAGAGGTGATGCAAAATCTGCCA
CAAAAGCATCAAACACTGCTGTTCAGTGCAACCATGCCAATGGAGATTGAAACATTAGCA
CAGGAGTATCTAAATAATCCTGTGCAAGTAAAGGTGGGAAAAGTGAGTTGCCCAACAGCA
AATGTTTCTCAGATTTTGGAGAAGGTTTCTGAAAGTGAGAAGATTGATGGACTTCTAGCT
TTACTTGTGGAGGAGGCATCCCAGGCTGAAAGATGTGGTCGTCCCTTTCCTTTAACCATC
GTTTTTGTTGAGAGGAAGACAAGGTGCGATGAAGTCGCGGAAGCTTTGGTAGCTCAAGGT
CTGCGTGCAGTTGCTCTTCATGGTGGCCGCAGTCAAGCTGAAAGAGAGGCTGCCCTTCGT
GATTTTAGGAATGGTGCTACTAATATCTTGGTTGCCACTGATGTTGCGTCCCGTGGTCTG
GATGTTACAGGAGTCGCCCATGTTATTAATCTCGATCTTCCAAAGGCAATGGAAAATTAT
GTACACCGGATTGGAAGGACGGGGCGTGCAGGATCAACAGGCCAAGCTACTTCTTTTTAT
ACTGATCGTGATGTGTTCCTTGTGGCTCATATAAGGAAAGCAATTGCTGATGTTGGATCT
GGGAATACTGTGGCATTTGCAACTGGGAAAGTTGCAAGAAAGAAGGAGAGAGAAGCAGCA
GCTGCACAGAAAGAAGCTAGGATTGCATTGTCCAATCTCTCATTGATGGGGCCGACATCA
TTAAATATAGAGGAAAAGTATAGGTTCATGATGAGCCCCTCGAGCATCAAGACAGAAGGT
GCAGCAGATGATGCTTGGGATGACTGA

Peptide Sequence

PEP ID

VIT_06s0004g08160.t01
PEP Infomation

pep chromosome:12X:6:8895193:8916559:1 gene:VIT_06s0004g08160 transcript:VIT_06s0004g08160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSYVPPHLRNPSSSISRTSKPTETSAVTLDDTHRTTNNLSYSSTNSHLSHSNASSSPSLS
RWASSNAAAVPRTPSVPEPVFPQWKPSDRVFLMKPEQIEEVRLRLNVDVTVAPDLPPAPA
PIESFTDMGLHQSIMKDITFHEYTRPTFIQAQAMPVALSGRDLLGCAETGSGKTAAFAIP
MIQHCLAQPPVRRGDGPLALVLAPTRELAQQIEKEVKAFSRSLDSFRTAIVVGGTNISEQ
RSELRAGVNIVVATPGRFIHHLQEGNTSLSRISFVVLDEADRMLDMGFEPQIREVMQNLP
QKHQTLLFSATMPMEIETLAQEYLNNPVQVKVGKVSCPTANVSQILEKVSESEKIDGLLA
LLVEEASQAERCGRPFPLTIVFVERKTRCDEVAEALVAQGLRAVALHGGRSQAEREAALR
DFRNGATNILVATDVASRGLDVTGVAHVINLDLPKAMENYVHRIGRTGRAGSTGQATSFY
TDRDVFLVAHIRKAIADVGSGNTVAFATGKVARKKEREAAAAQKEARIALSNLSLMGPTS
LNIEEKYRFMMSPSSIKTEGAADDAWDD

Transcript Sequence

Transcript ID

VIT_06s0004g08160.t01
Transcript Infomation

cdna chromosome:12X:6:8895193:8916559:1 gene:VIT_06s0004g08160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCTTATGTGCCACCGCACCTGAGGAACCCTTCTTCTTCTATCTCTCGAACCTCCAAA
CCTACCGAAACCTCCGCGGTAACCCTAGACGACACTCATCGCACCACCAACAACCTTTCC
TATTCCTCCACAAACTCTCATCTCTCTCATTCCAACGCCTCTTCCTCTCCTTCTCTCTCT
CGTTGGGCCTCCTCCAATGCCGCCGCCGTGCCTCGGACTCCCTCCGTTCCGGAGCCCGTT
TTCCCTCAGTGGAAGCCTTCCGACCGTGTTTTCCTTATGAAACCTGAACAGATTGAAGAG
GTCCGATTGCGGCTTAATGTTGATGTTACTGTTGCTCCAGACTTGCCTCCTGCACCTGCA
CCAATTGAATCATTCACAGACATGGGTCTGCACCAAAGCATCATGAAGGATATTACCTTT
CATGAATATACTAGGCCCACCTTTATTCAAGCTCAGGCCATGCCAGTTGCTCTCAGCGGA
AGGGATCTCCTGGGATGTGCTGAAACTGGTAGTGGAAAGACTGCTGCTTTTGCTATTCCT
ATGATTCAGCATTGCTTGGCTCAACCTCCTGTTCGGCGAGGTGATGGACCATTGGCATTG
GTCTTGGCTCCCACAAGAGAGCTTGCCCAACAAATAGAAAAGGAGGTTAAGGCTTTTAGT
AGATCACTTGATTCCTTTAGAACTGCGATAGTTGTGGGTGGAACAAACATTTCCGAGCAG
AGGTCTGAACTTAGAGCAGGAGTAAATATAGTGGTTGCCACTCCTGGAAGATTCATTCAT
CATTTACAAGAAGGAAACACGTCTCTTTCCAGAATTTCATTTGTTGTTTTGGATGAAGCT
GACAGAATGCTTGACATGGGATTTGAACCACAAATAAGAGAGGTGATGCAAAATCTGCCA
CAAAAGCATCAAACACTGCTGTTCAGTGCAACCATGCCAATGGAGATTGAAACATTAGCA
CAGGAGTATCTAAATAATCCTGTGCAAGTAAAGGTGGGAAAAGTGAGTTGCCCAACAGCA
AATGTTTCTCAGATTTTGGAGAAGGTTTCTGAAAGTGAGAAGATTGATGGACTTCTAGCT
TTACTTGTGGAGGAGGCATCCCAGGCTGAAAGATGTGGTCGTCCCTTTCCTTTAACCATC
GTTTTTGTTGAGAGGAAGACAAGGTGCGATGAAGTCGCGGAAGCTTTGGTAGCTCAAGGT
CTGCGTGCAGTTGCTCTTCATGGTGGCCGCAGTCAAGCTGAAAGAGAGGCTGCCCTTCGT
GATTTTAGGAATGGTGCTACTAATATCTTGGTTGCCACTGATGTTGCGTCCCGTGGTCTG
GATGTTACAGGAGTCGCCCATGTTATTAATCTCGATCTTCCAAAGGCAATGGAAAATTAT
GTACACCGGATTGGAAGGACGGGGCGTGCAGGATCAACAGGCCAAGCTACTTCTTTTTAT
ACTGATCGTGATGTGTTCCTTGTGGCTCATATAAGGAAAGCAATTGCTGATGTTGGATCT
GGGAATACTGTGGCATTTGCAACTGGGAAAGTTGCAAGAAAGAAGGAGAGAGAAGCAGCA
GCTGCACAGAAAGAAGCTAGGATTGCATTGTCCAATCTCTCATTGATGGGGCCGACATCA
TTAAATATAGAGGAAAAGTATAGGTTCATGATGAGCCCCTCGAGCATCAAGACAGAAGGT
GCAGCAGATGATGCTTGGGATGACTGATATAAAAAGGTCTCCCATTTGGTACTTCTTGTT
ACAAAAGATGGCTAATGATCCTATGTCTTAAGTATCCAAGATAGCAAGGTGTTGCTTGGG
GTACAAGGTGATGTCAATGATGATGAACTTTTTGTAAGTTTGTTTTTACACAATTAATGT
AGTTAG