Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08150.t01
CDS Infomation

cds chromosome:12X:6:8882451:8885910:-1 gene:VIT_06s0004g08150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCTCATACTCATAGAGAAAGCTCTGTTAGCGGTGTTCTGCGCTATAATTCTGGCC
ATCACCATCTCTAAGCTTCTGGGGAAGAAATTAAAGCTGCCTCCAGGTCCTCTGCCGGTG
CCGGTTTTCGGGAACTGGCTGCAGGTTGGGGATGACTTGAACCACCTGAACCTCTCCGAC
TTAGCGAAGAAATTCGGGGACATTTTCATGCTGCGAATGGGGCAGCGGAACCTGGTGGTG
GTGTCGTCGCCGGACCTGGCGAAGGACGTTTTGCACACTCAGGGAGTGGAGTTCGGATCA
CGCACAAGAAACGTGGTGTTCGACATATTCACAGGTAAGGGCCAGGACATGGTGTTCACG
GTGTACGGTGAGCATTGGCGGAAGATGCGGCGGATCATGACCGTCCCTTTCTTCACCAAC
AAGGTAGTTCAGCAGTACCGCGTCGGATGGGAGGACGAGGCGGCGCGTGTGGTTGAGGAC
GTGAAGAAGAATCCCGAGGCCTCCACCAACGGAATCGTGCTGAGGAGACGGTTGCAGCTC
ATGATGTACAACAACATGTATAGAATCATGTTCGATAGAAGATTCGATAGTGAGGAGGAT
CCGTTGTTCGTGAAGCTCAAAGCCTTGAACGGAGAGAGGAGTAGACTGGCTCAGAGCTTC
GAGTACAATTATGGAGACTTCATTCCCATTTTGAGACCATTTTTGAGAGGCTACCTGAAA
ATCTGCAAGGAAGTTAAGGAGAGAAGGTTGCAGCTCTTCAAGGACCATTTTCTTGAGGAG
AGGAAGAAGCTGGCAAGCACAAAGAGCACAGATCACAACAGTCTGAAATGCGCCGTTGAT
CATATTTTGGATGCTCAGCAGAAGGGTGAGATCAACGAGGACAACGTCCTTTACATTGTG
GAGAACATCAATGTTGCTGCTATTGAAACAACGTTGTGGTCAATCGAGTGGGGCATTGCA
GAGCTGGTGAACCACCCTCACATCCAGAAGAAGCTCAGGGATGAGCTGAACACTGTGCTT
GGACCTGGCGTCCAAGTCACCGAGCCTGATATCCAAAAGCTTCCATATCTTCAGGCTGTA
ATCAAAGAAACTCTCCGGCTAAGGATGGCAATTCCTCTCCTGGTCCCCCACATGAATCTG
AATGATGCAAAGCTCGGTGGCTATGACATTCCTGCTGAGAGCAAAATCCTGGTGAACGCA
TGGTGGCTTGCTAACGACTCTTCCAAGTGGAAAAAACCAGAAGAGTTCAGGCCAGAGAGA
TTCCTGGAGGAGGAGTCCAAGGTTGAGGCCAATGGCAATGACTTCAGGTACCTCCCGTTC
GGTGTTGGAAGAAGAAGCTGCCCTGGAATCATTCTTGCTCTGCCAATTCTTGGTATCACA
ATTGGACGTCTGGTTCAGAATTTTGAGCTCCTCCCTCCTCCTGGACAGGCCAAACTTGAC
ACCACAGGAAAGGGTGGGCAGTTCAGTTTGCACATCTTGAAGCATTCCACCATTGTGGCA
AGGCCAATAGAAGCTTGA

Peptide Sequence

PEP ID

VIT_06s0004g08150.t01
PEP Infomation

pep chromosome:12X:6:8882451:8885910:-1 gene:VIT_06s0004g08150 transcript:VIT_06s0004g08150.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDLILIEKALLAVFCAIILAITISKLLGKKLKLPPGPLPVPVFGNWLQVGDDLNHLNLSD
LAKKFGDIFMLRMGQRNLVVVSSPDLAKDVLHTQGVEFGSRTRNVVFDIFTGKGQDMVFT
VYGEHWRKMRRIMTVPFFTNKVVQQYRVGWEDEAARVVEDVKKNPEASTNGIVLRRRLQL
MMYNNMYRIMFDRRFDSEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLRGYLK
ICKEVKERRLQLFKDHFLEERKKLASTKSTDHNSLKCAVDHILDAQQKGEINEDNVLYIV
ENINVAAIETTLWSIEWGIAELVNHPHIQKKLRDELNTVLGPGVQVTEPDIQKLPYLQAV
IKETLRLRMAIPLLVPHMNLNDAKLGGYDIPAESKILVNAWWLANDSSKWKKPEEFRPER
FLEEESKVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQAKLD
TTGKGGQFSLHILKHSTIVARPIEA

Transcript Sequence

Transcript ID

VIT_06s0004g08150.t01
Transcript Infomation

cdna chromosome:12X:6:8882451:8885910:-1 gene:VIT_06s0004g08150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CACCGCCACAACCATGGATCTCATACTCATAGAGAAAGCTCTGTTAGCGGTGTTCTGCGC
TATAATTCTGGCCATCACCATCTCTAAGCTTCTGGGGAAGAAATTAAAGCTGCCTCCAGG
TCCTCTGCCGGTGCCGGTTTTCGGGAACTGGCTGCAGGTTGGGGATGACTTGAACCACCT
GAACCTCTCCGACTTAGCGAAGAAATTCGGGGACATTTTCATGCTGCGAATGGGGCAGCG
GAACCTGGTGGTGGTGTCGTCGCCGGACCTGGCGAAGGACGTTTTGCACACTCAGGGAGT
GGAGTTCGGATCACGCACAAGAAACGTGGTGTTCGACATATTCACAGGTAAGGGCCAGGA
CATGGTGTTCACGGTGTACGGTGAGCATTGGCGGAAGATGCGGCGGATCATGACCGTCCC
TTTCTTCACCAACAAGGTAGTTCAGCAGTACCGCGTCGGATGGGAGGACGAGGCGGCGCG
TGTGGTTGAGGACGTGAAGAAGAATCCCGAGGCCTCCACCAACGGAATCGTGCTGAGGAG
ACGGTTGCAGCTCATGATGTACAACAACATGTATAGAATCATGTTCGATAGAAGATTCGA
TAGTGAGGAGGATCCGTTGTTCGTGAAGCTCAAAGCCTTGAACGGAGAGAGGAGTAGACT
GGCTCAGAGCTTCGAGTACAATTATGGAGACTTCATTCCCATTTTGAGACCATTTTTGAG
AGGCTACCTGAAAATCTGCAAGGAAGTTAAGGAGAGAAGGTTGCAGCTCTTCAAGGACCA
TTTTCTTGAGGAGAGGAAGAAGCTGGCAAGCACAAAGAGCACAGATCACAACAGTCTGAA
ATGCGCCGTTGATCATATTTTGGATGCTCAGCAGAAGGGTGAGATCAACGAGGACAACGT
CCTTTACATTGTGGAGAACATCAATGTTGCTGCTATTGAAACAACGTTGTGGTCAATCGA
GTGGGGCATTGCAGAGCTGGTGAACCACCCTCACATCCAGAAGAAGCTCAGGGATGAGCT
GAACACTGTGCTTGGACCTGGCGTCCAAGTCACCGAGCCTGATATCCAAAAGCTTCCATA
TCTTCAGGCTGTAATCAAAGAAACTCTCCGGCTAAGGATGGCAATTCCTCTCCTGGTCCC
CCACATGAATCTGAATGATGCAAAGCTCGGTGGCTATGACATTCCTGCTGAGAGCAAAAT
CCTGGTGAACGCATGGTGGCTTGCTAACGACTCTTCCAAGTGGAAAAAACCAGAAGAGTT
CAGGCCAGAGAGATTCCTGGAGGAGGAGTCCAAGGTTGAGGCCAATGGCAATGACTTCAG
GTACCTCCCGTTCGGTGTTGGAAGAAGAAGCTGCCCTGGAATCATTCTTGCTCTGCCAAT
TCTTGGTATCACAATTGGACGTCTGGTTCAGAATTTTGAGCTCCTCCCTCCTCCTGGACA
GGCCAAACTTGACACCACAGGAAAGGGTGGGCAGTTCAGTTTGCACATCTTGAAGCATTC
CACCATTGTGGCAAGGCCAATAGAAGCTTGAATTTCCCACTCTCCACTCAATATCTTCCT
TTCACCCCCCGCCCACCCTTTTTTTTTTTTTTTTGTCCTGTCACTTTTGAGGTTTTTAAA
GATGAAGATGGGAAACTATTATGCTTCATGTGGTTTGTGACTGTAAGTAAATCTATGAAT
TTGCAATAATTTCAT