Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_06s0004g08070.t01
CDS Infomation

cds chromosome:12X:6:8835674:8841051:-1 gene:VIT_06s0004g08070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAGATCCATCTAGCTCCCACAATGCTCCCAAAAATTCAACGCCGGCGACGATGTAC
GGAAACCCTGCTACCTCCTTCAGAGGTCCTCACCACCGGCGAGCTCATTCCGAGCTCACT
TTCCGGATGCCGGACGACGTGGATCTATCCTCCTCCGATCCCTTCAACGCCTCTGCCGCC
AGCCTCGAAGAGATCGCCTCCGAGGACGACCTCTTCTCCACGTACATCGATGTCGACAAG
CTCGGCGCCGGGGGGAATGGTGCGGATCAGAGCGGTGAGGCGGAGAAGAGTGTGAAGCCT
CGGCATCGGCACAGTAATTCGGTGGATTGCTCGTCCTCCAAGGGAGAAGAGGGTGTTTTT
GGTGAGATTATGGACGCTAAGAAGGCAATGCCTCCTGATAAGTTGGCTGAGCTTTGGAAT
ATTGATCCTAAGCGCGCCAAAAGGATTCTGGCAAACCGGCAATCTGCTGCTCGCTCAAAA
GAGAGGAAGGCCCGTTATATATTAGAACTTGAGCGAAAAGTTCAGACCCTTCAAACAGAA
GCCACCACTCTTTCTGCACAACTCACACTGTACCAGAGAGACACAACAGGTCTAAGTACT
GAAAACACAGAACTTAAGCTTCGGTTACAAGCTATGGAGCAACAAGCTCAATTGCGTGAT
GCTCTAAATACAGCATTGAAGCAGGAAGTTGAGAGACTAAAAATTGCCACTGGGGAAATA
ATGAGCCCCTCTGAGTCATTTGACCTGGGAATGCAGCAAATGCTATACACCCCATCATCC
TTTCTCTCACTTCCTCAACAAATTGGGCCTGCTGGCCAGCCAAACATGCAGTTGCCACCA
TTCCATCATTCCCATTCTAACATGTCAACTCAGTACCTGCAGCCTATAAATTCTCAACCG
ATCTCAGAAATTTTGCAGAATGACCCTCTTGGCCGATTACAGGGCCTTGACATCAGTAGC
AGAGGCTCACATCTTGTGAAGTCTGAAGGCCCTTCCATCTCTGCCTGCGAGAGTAGCAGC
ACGTTTTAA

Peptide Sequence

PEP ID

VIT_06s0004g08070.t01
PEP Infomation

pep chromosome:12X:6:8835674:8841051:-1 gene:VIT_06s0004g08070 transcript:VIT_06s0004g08070.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQDPSSSHNAPKNSTPATMYGNPATSFRGPHHRRAHSELTFRMPDDVDLSSSDPFNASAA
SLEEIASEDDLFSTYIDVDKLGAGGNGADQSGEAEKSVKPRHRHSNSVDCSSSKGEEGVF
GEIMDAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYILELERKVQTLQTE
ATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQQAQLRDALNTALKQEVERLKIATGEI
MSPSESFDLGMQQMLYTPSSFLSLPQQIGPAGQPNMQLPPFHHSHSNMSTQYLQPINSQP
ISEILQNDPLGRLQGLDISSRGSHLVKSEGPSISACESSSTF

Transcript Sequence

Transcript ID

VIT_06s0004g08070.t01
Transcript Infomation

cdna chromosome:12X:6:8835674:8841051:-1 gene:VIT_06s0004g08070 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTTTAACCTTCCCAGATTGTCTGCGGCTTTGAAAGGAGGGTAGAAAAACAGAAGGCGAAG
CAACGTCCATGAAAATGCAAGATCCATCTAGCTCCCACAATGCTCCCAAAAATTCAACGC
CGGCGACGATGTACGGAAACCCTGCTACCTCCTTCAGAGGTCCTCACCACCGGCGAGCTC
ATTCCGAGCTCACTTTCCGGATGCCGGACGACGTGGATCTATCCTCCTCCGATCCCTTCA
ACGCCTCTGCCGCCAGCCTCGAAGAGATCGCCTCCGAGGACGACCTCTTCTCCACGTACA
TCGATGTCGACAAGCTCGGCGCCGGGGGGAATGGTGCGGATCAGAGCGGTGAGGCGGAGA
AGAGTGTGAAGCCTCGGCATCGGCACAGTAATTCGGTGGATTGCTCGTCCTCCAAGGGAG
AAGAGGGTGTTTTTGGTGAGATTATGGACGCTAAGAAGGCAATGCCTCCTGATAAGTTGG
CTGAGCTTTGGAATATTGATCCTAAGCGCGCCAAAAGGATTCTGGCAAACCGGCAATCTG
CTGCTCGCTCAAAAGAGAGGAAGGCCCGTTATATATTAGAACTTGAGCGAAAAGTTCAGA
CCCTTCAAACAGAAGCCACCACTCTTTCTGCACAACTCACACTGTACCAGAGAGACACAA
CAGGTCTAAGTACTGAAAACACAGAACTTAAGCTTCGGTTACAAGCTATGGAGCAACAAG
CTCAATTGCGTGATGCTCTAAATACAGCATTGAAGCAGGAAGTTGAGAGACTAAAAATTG
CCACTGGGGAAATAATGAGCCCCTCTGAGTCATTTGACCTGGGAATGCAGCAAATGCTAT
ACACCCCATCATCCTTTCTCTCACTTCCTCAACAAATTGGGCCTGCTGGCCAGCCAAACA
TGCAGTTGCCACCATTCCATCATTCCCATTCTAACATGTCAACTCAGTACCTGCAGCCTA
TAAATTCTCAACCGATCTCAGAAATTTTGCAGAATGACCCTCTTGGCCGATTACAGGGCC
TTGACATCAGTAGCAGAGGCTCACATCTTGTGAAGTCTGAAGGCCCTTCCATCTCTGCCT
GCGAGAGTAGCAGCACGTTTTAATTCCAACCAGCCACTGACTTGTTGACTTTTCCATTGC
GCAGATATGTCTATAGACTGACATCCCGTTGTTAGAGAAGATACTATATTTATTTTATTT
TTTATTCATTTGGTAACTAGTATCCTACTTTGGATCATTTCCTAATTGTTTATTCTTGGG
GTTGCTTCCCCAAGAAAGGGAAGCTCCCTTAGGCTTTATTGCAATGTTCATGTGTTCCTC
TTTACAATATGAAATTTTGTTTCTTGGGGTTCTAGGACCAGTGGGAATGAAAGGTCATTT
CCACTGGATGGAGAGACACCCATCTTTCCATGATACTACTCCCTTGCTTTGTATTTTC